Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC3.38□□□□□ -1.87
CMC4P56277 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC3.38□□□□□ -1.87
CMC4P56277 Z95152.1-201ENST00000453556 656 ntBASIC3.38□□□□□ -1.87
CMC4P56277 MTND2P28-201ENST00000457540 1044 ntBASIC3.38□□□□□ -1.87
CMC4P56277 DAP3-209ENST00000465375 729 ntTSL 2 BASIC3.38□□□□□ -1.87
CMC4P56277 AC092905.1-201ENST00000467527 949 ntBASIC3.38□□□□□ -1.87
CMC4P56277 AK5-208ENST00000478255 556 ntTSL 2 BASIC3.38□□□□□ -1.87
CMC4P56277 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC3.38□□□□□ -1.87
CMC4P56277 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC3.38□□□□□ -1.87
CMC4P56277 SNORA70.11-201ENST00000515987 138 ntBASIC3.38□□□□□ -1.87
CMC4P56277 SNORA70.13-201ENST00000516116 138 ntBASIC3.38□□□□□ -1.87
CMC4P56277 FTH1P11-201ENST00000517577 551 ntBASIC3.38□□□□□ -1.87
CMC4P56277 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC3.38□□□□□ -1.87
CMC4P56277 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC3.38□□□□□ -1.87
CMC4P56277 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CMC4P56277 AL390334.1-201ENST00000556395 450 ntBASIC3.38□□□□□ -1.87
CMC4P56277 RPL21P7-201ENST00000557463 483 ntBASIC3.38□□□□□ -1.87
CMC4P56277 AC027455.1-201ENST00000574104 594 ntBASIC3.38□□□□□ -1.87
CMC4P56277 AP005119.2-201ENST00000579735 1105 ntBASIC3.38□□□□□ -1.87
CMC4P56277 AC135803.1-201ENST00000608748 565 ntBASIC3.38□□□□□ -1.87
CMC4P56277 AC100847.1-201ENST00000611316 481 ntBASIC3.38□□□□□ -1.87
CMC4P56277 AC015871.5-202ENST00000623252 701 ntBASIC3.38□□□□□ -1.87
CMC4P56277 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC3.38□□□□□ -1.87
CMC4P56277 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC3.38□□□□□ -1.87
CMC4P56277 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
CMC4P56277 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CMC4P56277 CARF-203ENST00000414439 2099 ntTSL 2 BASIC3.38□□□□□ -1.87
CMC4P56277 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC3.38□□□□□ -1.87
CMC4P56277 EOGT-210ENST00000615922 1931 ntBASIC3.38□□□□□ -1.87
CMC4P56277 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
CMC4P56277 CPHL1P-201ENST00000461341 3407 ntBASIC3.38□□□□□ -1.87
CMC4P56277 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
CMC4P56277 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC3.38□□□□□ -1.87
CMC4P56277 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CMC4P56277 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC3.37□□□□□ -1.87
CMC4P56277 HSPD1P14-201ENST00000432666 1618 ntBASIC3.37□□□□□ -1.87
CMC4P56277 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CMC4P56277 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
CMC4P56277 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CMC4P56277 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CMC4P56277 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC3.37□□□□□ -1.87
CMC4P56277 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CMC4P56277 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CMC4P56277 MIR3065-201ENST00000390137 79 ntBASIC3.37□□□□□ -1.87
CMC4P56277 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
CMC4P56277 OR51B3P-201ENST00000412287 913 ntBASIC3.37□□□□□ -1.87
CMC4P56277 AC019050.1-201ENST00000418508 492 ntBASIC3.37□□□□□ -1.87
CMC4P56277 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CMC4P56277 AL606490.7-201ENST00000433136 191 ntBASIC3.37□□□□□ -1.87
CMC4P56277 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC3.37□□□□□ -1.87
CMC4P56277 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC3.37□□□□□ -1.87
CMC4P56277 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC3.37□□□□□ -1.87
CMC4P56277 RPL23AP93-201ENST00000440847 484 ntBASIC3.37□□□□□ -1.87
CMC4P56277 ARL4AP3-201ENST00000441452 574 ntBASIC3.37□□□□□ -1.87
CMC4P56277 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
CMC4P56277 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC3.37□□□□□ -1.87
CMC4P56277 RPL5P13-201ENST00000462840 709 ntBASIC3.37□□□□□ -1.87
CMC4P56277 AC021205.1-201ENST00000468797 348 ntBASIC3.37□□□□□ -1.87
CMC4P56277 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CMC4P56277 RPL23AP72-201ENST00000492447 435 ntBASIC3.37□□□□□ -1.87
CMC4P56277 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC3.37□□□□□ -1.87
CMC4P56277 CDV3-208ENST00000511392 554 ntTSL 5 BASIC3.37□□□□□ -1.87
CMC4P56277 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC3.37□□□□□ -1.87
CMC4P56277 ACTR6P1-201ENST00000514311 1104 ntBASIC3.37□□□□□ -1.87
CMC4P56277 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC3.37□□□□□ -1.87
CMC4P56277 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC3.37□□□□□ -1.87
CMC4P56277 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC3.37□□□□□ -1.87
CMC4P56277 OR5M2P-201ENST00000529003 936 ntBASIC3.37□□□□□ -1.87
CMC4P56277 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC3.37□□□□□ -1.87
CMC4P56277 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CMC4P56277 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC3.37□□□□□ -1.87
CMC4P56277 AC084783.1-201ENST00000565846 910 ntBASIC3.37□□□□□ -1.87
CMC4P56277 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC3.37□□□□□ -1.87
CMC4P56277 AC015912.2-201ENST00000571053 181 ntBASIC3.37□□□□□ -1.87
CMC4P56277 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC3.37□□□□□ -1.87
CMC4P56277 MIR4284-201ENST00000578924 81 ntBASIC3.37□□□□□ -1.87
CMC4P56277 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC3.37□□□□□ -1.87
CMC4P56277 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC3.37□□□□□ -1.87
CMC4P56277 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC3.37□□□□□ -1.87
CMC4P56277 RPL7P50-201ENST00000600588 727 ntBASIC3.37□□□□□ -1.87
CMC4P56277 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC3.37□□□□□ -1.87
CMC4P56277 AC006363.1-201ENST00000603806 463 ntBASIC3.37□□□□□ -1.87
CMC4P56277 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC3.37□□□□□ -1.87
CMC4P56277 SSX9-202ENST00000608568 580 ntTSL 4 BASIC3.37□□□□□ -1.87
CMC4P56277 AC084036.1-201ENST00000609190 508 ntBASIC3.37□□□□□ -1.87
CMC4P56277 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC3.37□□□□□ -1.87
CMC4P56277 AC145207.9-201ENST00000623802 325 ntBASIC3.37□□□□□ -1.87
CMC4P56277 AC119674.1-220ENST00000641502 1048 ntBASIC3.37□□□□□ -1.87
CMC4P56277 CROT-204ENST00000442291 1993 ntTSL 5 BASIC3.37□□□□□ -1.87
CMC4P56277 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.37□□□□□ -1.87
CMC4P56277 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CMC4P56277 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC3.37□□□□□ -1.87
CMC4P56277 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC3.37□□□□□ -1.87
CMC4P56277 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
CMC4P56277 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC3.37□□□□□ -1.87
CMC4P56277 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC3.37□□□□□ -1.87
CMC4P56277 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CMC4P56277 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CMC4P56277 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC3.37□□□□□ -1.87
CMC4P56277 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms