Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC4.6□□□□□ -1.67
CDH6P55285 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.6□□□□□ -1.67
CDH6P55285 AC100770.1-201ENST00000532310 322 ntBASIC4.6□□□□□ -1.67
CDH6P55285 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.6□□□□□ -1.67
CDH6P55285 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC4.6□□□□□ -1.67
CDH6P55285 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC4.6□□□□□ -1.67
CDH6P55285 AC090312.1-201ENST00000580637 348 ntBASIC4.6□□□□□ -1.67
CDH6P55285 SNX6P1-201ENST00000601728 1224 ntBASIC4.6□□□□□ -1.67
CDH6P55285 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.6□□□□□ -1.67
CDH6P55285 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.6□□□□□ -1.67
CDH6P55285 MIR6891-201ENST00000618788 93 ntBASIC4.6□□□□□ -1.67
CDH6P55285 AL592148.3-201ENST00000608771 2646 ntBASIC4.6□□□□□ -1.67
CDH6P55285 AC073429.2-201ENST00000569694 1444 ntBASIC4.6□□□□□ -1.67
CDH6P55285 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CDH6P55285 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
CDH6P55285 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.6□□□□□ -1.67
CDH6P55285 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CDH6P55285 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CDH6P55285 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CDH6P55285 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC4.59□□□□□ -1.67
CDH6P55285 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CDH6P55285 MAPK10-349ENST00000641767 3661 ntBASIC4.59□□□□□ -1.67
CDH6P55285 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CDH6P55285 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC4.59□□□□□ -1.67
CDH6P55285 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.59□□□□□ -1.67
CDH6P55285 MIR192-201ENST00000384915 110 ntBASIC4.59□□□□□ -1.67
CDH6P55285 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
CDH6P55285 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC4.59□□□□□ -1.67
CDH6P55285 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC4.59□□□□□ -1.67
CDH6P55285 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.59□□□□□ -1.67
CDH6P55285 RPEP2-201ENST00000432149 701 ntBASIC4.59□□□□□ -1.67
CDH6P55285 NDUFA5P1-201ENST00000433858 341 ntBASIC4.59□□□□□ -1.67
CDH6P55285 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.59□□□□□ -1.67
CDH6P55285 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.59□□□□□ -1.67
CDH6P55285 AC069277.2-201ENST00000454211 432 ntBASIC4.59□□□□□ -1.67
CDH6P55285 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CDH6P55285 OR52A4P-201ENST00000472867 958 ntBASIC4.59□□□□□ -1.67
CDH6P55285 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC4.59□□□□□ -1.67
CDH6P55285 AC007686.1-201ENST00000488511 463 ntBASIC4.59□□□□□ -1.67
CDH6P55285 RPL23AP72-201ENST00000492447 435 ntBASIC4.59□□□□□ -1.67
CDH6P55285 F11-205ENST00000492972 1204 ntTSL 2 BASIC4.59□□□□□ -1.67
CDH6P55285 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.59□□□□□ -1.67
CDH6P55285 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.59□□□□□ -1.67
CDH6P55285 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC4.59□□□□□ -1.67
CDH6P55285 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC4.59□□□□□ -1.67
CDH6P55285 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.59□□□□□ -1.67
CDH6P55285 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC4.59□□□□□ -1.67
CDH6P55285 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.59□□□□□ -1.67
CDH6P55285 AC137768.1-201ENST00000549998 553 ntBASIC4.59□□□□□ -1.67
CDH6P55285 HMGB3P26-201ENST00000560051 582 ntBASIC4.59□□□□□ -1.67
CDH6P55285 RPL23AP97-201ENST00000568955 471 ntBASIC4.59□□□□□ -1.67
CDH6P55285 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC4.59□□□□□ -1.67
CDH6P55285 AC008782.1-201ENST00000603386 430 ntBASIC4.59□□□□□ -1.67
CDH6P55285 AC007620.3-201ENST00000608131 497 ntBASIC4.59□□□□□ -1.67
CDH6P55285 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
CDH6P55285 AC023509.5-201ENST00000617434 807 ntBASIC4.59□□□□□ -1.67
CDH6P55285 AP005019.3-201ENST00000620418 560 ntBASIC4.59□□□□□ -1.67
CDH6P55285 AP001273.1-201ENST00000624493 3152 ntBASIC4.59□□□□□ -1.67
CDH6P55285 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.59□□□□□ -1.67
CDH6P55285 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.59□□□□□ -1.67
CDH6P55285 OR56B2P-202ENST00000641377 2453 ntBASIC4.59□□□□□ -1.67
CDH6P55285 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
CDH6P55285 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.59□□□□□ -1.68
CDH6P55285 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
CDH6P55285 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
CDH6P55285 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
CDH6P55285 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
CDH6P55285 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
CDH6P55285 AC005332.5-201ENST00000591222 2919 ntBASIC4.58□□□□□ -1.68
CDH6P55285 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
CDH6P55285 OR10J6P-201ENST00000289731 930 ntBASIC4.58□□□□□ -1.68
CDH6P55285 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
CDH6P55285 AC067945.1-201ENST00000342609 618 ntBASIC4.58□□□□□ -1.68
CDH6P55285 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CDH6P55285 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CDH6P55285 CYB5AP4-201ENST00000396692 399 ntBASIC4.58□□□□□ -1.68
CDH6P55285 RPS24P12-201ENST00000402084 394 ntBASIC4.58□□□□□ -1.68
CDH6P55285 RPS4XP9-201ENST00000405151 780 ntBASIC4.58□□□□□ -1.68
CDH6P55285 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CDH6P55285 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.58□□□□□ -1.68
CDH6P55285 UBTFL3-201ENST00000418934 1024 ntBASIC4.58□□□□□ -1.68
CDH6P55285 AC069213.2-201ENST00000420238 366 ntBASIC4.58□□□□□ -1.68
CDH6P55285 AC006065.1-201ENST00000422539 802 ntBASIC4.58□□□□□ -1.68
CDH6P55285 RPL23AP4-201ENST00000427757 463 ntBASIC4.58□□□□□ -1.68
CDH6P55285 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC4.58□□□□□ -1.68
CDH6P55285 AC011753.3-201ENST00000443436 406 ntBASIC4.58□□□□□ -1.68
CDH6P55285 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC4.58□□□□□ -1.68
CDH6P55285 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC4.58□□□□□ -1.68
CDH6P55285 PSMC1P13-201ENST00000458195 985 ntBASIC4.58□□□□□ -1.68
CDH6P55285 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
CDH6P55285 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.58□□□□□ -1.68
CDH6P55285 RPL21P126-201ENST00000470049 478 ntBASIC4.58□□□□□ -1.68
CDH6P55285 UBTFL6-201ENST00000477929 1024 ntBASIC4.58□□□□□ -1.68
CDH6P55285 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.58□□□□□ -1.68
CDH6P55285 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC4.58□□□□□ -1.68
CDH6P55285 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.58□□□□□ -1.68
CDH6P55285 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC4.58□□□□□ -1.68
CDH6P55285 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.58□□□□□ -1.68
CDH6P55285 MEG8-217ENST00000556637 924 ntTSL 5 BASIC4.58□□□□□ -1.68
CDH6P55285 AC084783.1-201ENST00000565846 910 ntBASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms