Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CLTCL1P53675 RPL38P1-201ENST00000460914 211 ntBASIC5.98□□□□□ -1.45
CLTCL1P53675 AC112206.1-201ENST00000468416 477 ntBASIC5.98□□□□□ -1.45
CLTCL1P53675 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC5.98□□□□□ -1.45
CLTCL1P53675 IFITM8P-201ENST00000522529 394 ntBASIC5.98□□□□□ -1.45
CLTCL1P53675 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC5.98□□□□□ -1.45
CLTCL1P53675 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.98□□□□□ -1.45
CLTCL1P53675 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CLTCL1P53675 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
CLTCL1P53675 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC5.98□□□□□ -1.45
CLTCL1P53675 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC5.97□□□□□ -1.45
CLTCL1P53675 AL672167.1-205ENST00000641112 3080 ntBASIC5.97□□□□□ -1.45
CLTCL1P53675 DMD-211ENST00000378707 7410 ntTSL 5 BASIC5.97□□□□□ -1.45
CLTCL1P53675 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC5.97□□□□□ -1.45
CLTCL1P53675 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
CLTCL1P53675 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC5.97□□□□□ -1.45
CLTCL1P53675 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC5.97□□□□□ -1.45
CLTCL1P53675 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC5.97□□□□□ -1.45
CLTCL1P53675 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CLTCL1P53675 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC5.97□□□□□ -1.45
CLTCL1P53675 RPL7P2-201ENST00000427639 268 ntBASIC5.97□□□□□ -1.45
CLTCL1P53675 RPS26P2-201ENST00000440331 348 ntBASIC5.97□□□□□ -1.45
CLTCL1P53675 VN1R34P-201ENST00000447387 883 ntBASIC5.97□□□□□ -1.45
CLTCL1P53675 AC010460.1-201ENST00000507087 466 ntBASIC5.97□□□□□ -1.45
CLTCL1P53675 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC5.97□□□□□ -1.45
CLTCL1P53675 CCNG2P1-201ENST00000549521 1000 ntBASIC5.97□□□□□ -1.45
CLTCL1P53675 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC5.97□□□□□ -1.45
CLTCL1P53675 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC5.97□□□□□ -1.45
CLTCL1P53675 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC5.97□□□□□ -1.45
CLTCL1P53675 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC5.97□□□□□ -1.45
CLTCL1P53675 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
CLTCL1P53675 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CLTCL1P53675 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.97□□□□□ -1.45
CLTCL1P53675 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC5.97□□□□□ -1.45
CLTCL1P53675 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC5.97□□□□□ -1.45
CLTCL1P53675 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CLTCL1P53675 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CLTCL1P53675 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
CLTCL1P53675 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CLTCL1P53675 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
CLTCL1P53675 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.96□□□□□ -1.45
CLTCL1P53675 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
CLTCL1P53675 PPIAP13-201ENST00000434706 478 ntBASIC5.96□□□□□ -1.45
CLTCL1P53675 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC5.96□□□□□ -1.45
CLTCL1P53675 AL031584.1-201ENST00000447169 754 ntBASIC5.96□□□□□ -1.45
CLTCL1P53675 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.96□□□□□ -1.45
CLTCL1P53675 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.96□□□□□ -1.45
CLTCL1P53675 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC5.96□□□□□ -1.45
CLTCL1P53675 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.45
CLTCL1P53675 AC027176.2-201ENST00000559166 746 ntBASIC5.96□□□□□ -1.45
CLTCL1P53675 AC110743.1-201ENST00000584870 478 ntBASIC5.96□□□□□ -1.45
CLTCL1P53675 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC5.96□□□□□ -1.45
CLTCL1P53675 AC140113.4-201ENST00000622087 222 ntBASIC5.96□□□□□ -1.45
CLTCL1P53675 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC5.96□□□□□ -1.45
CLTCL1P53675 VPS35P1-201ENST00000563400 1518 ntBASIC5.96□□□□□ -1.45
CLTCL1P53675 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC5.96□□□□□ -1.46
CLTCL1P53675 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
CLTCL1P53675 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
CLTCL1P53675 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
CLTCL1P53675 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
CLTCL1P53675 RNU6ATAC-201ENST00000408749 126 ntBASIC5.96□□□□□ -1.46
CLTCL1P53675 RN7SKP202-201ENST00000410439 330 ntBASIC5.96□□□□□ -1.46
CLTCL1P53675 AL358232.1-201ENST00000448030 501 ntBASIC5.96□□□□□ -1.46
CLTCL1P53675 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
CLTCL1P53675 DEFB109F-201ENST00000491870 277 ntBASIC5.96□□□□□ -1.46
CLTCL1P53675 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC5.96□□□□□ -1.46
CLTCL1P53675 AP005901.4-201ENST00000577336 569 ntBASIC5.96□□□□□ -1.46
CLTCL1P53675 AL121772.2-201ENST00000614331 297 ntBASIC5.96□□□□□ -1.46
CLTCL1P53675 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.96□□□□□ -1.46
CLTCL1P53675 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
CLTCL1P53675 AC090220.1-201ENST00000593078 1699 ntBASIC5.95□□□□□ -1.46
CLTCL1P53675 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC5.95□□□□□ -1.46
CLTCL1P53675 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
CLTCL1P53675 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC5.95□□□□□ -1.46
CLTCL1P53675 TINAG-201ENST00000259782 1754 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CLTCL1P53675 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CLTCL1P53675 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CLTCL1P53675 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CLTCL1P53675 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
CLTCL1P53675 SNORA71.3-201ENST00000362582 128 ntBASIC5.95□□□□□ -1.46
CLTCL1P53675 ACEA_U3.1-201ENST00000363057 217 ntBASIC5.95□□□□□ -1.46
CLTCL1P53675 U8.11-201ENST00000384699 133 ntBASIC5.95□□□□□ -1.46
CLTCL1P53675 U8.12-201ENST00000384701 133 ntBASIC5.95□□□□□ -1.46
CLTCL1P53675 HMGB3P5-201ENST00000428894 612 ntBASIC5.95□□□□□ -1.46
CLTCL1P53675 PRELID3BP10-201ENST00000431957 584 ntBASIC5.95□□□□□ -1.46
CLTCL1P53675 U8.18-201ENST00000459285 133 ntBASIC5.95□□□□□ -1.46
CLTCL1P53675 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CLTCL1P53675 AC090312.1-201ENST00000580637 348 ntBASIC5.95□□□□□ -1.46
CLTCL1P53675 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC5.95□□□□□ -1.46
CLTCL1P53675 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
CLTCL1P53675 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CLTCL1P53675 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
CLTCL1P53675 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC5.95□□□□□ -1.46
CLTCL1P53675 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CLTCL1P53675 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CLTCL1P53675 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC5.95□□□□□ -1.46
CLTCL1P53675 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC5.94□□□□□ -1.46
CLTCL1P53675 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CLTCL1P53675 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
CLTCL1P53675 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC5.94□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms