Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CX3CR1P49238 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
CX3CR1P49238 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
CX3CR1P49238 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.02□□□□□ -1.77
CX3CR1P49238 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
CX3CR1P49238 RNU6-666P-201ENST00000363499 107 ntBASIC4.02□□□□□ -1.77
CX3CR1P49238 RNU6-819P-201ENST00000364116 107 ntBASIC4.02□□□□□ -1.77
CX3CR1P49238 SNORA71.2-201ENST00000364941 134 ntBASIC4.02□□□□□ -1.77
CX3CR1P49238 RNU6-244P-201ENST00000391028 104 ntBASIC4.02□□□□□ -1.77
CX3CR1P49238 AL645733.1-201ENST00000402250 217 ntBASIC4.02□□□□□ -1.77
CX3CR1P49238 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.02□□□□□ -1.77
CX3CR1P49238 RN7SKP216-201ENST00000411050 312 ntBASIC4.02□□□□□ -1.77
CX3CR1P49238 RPL26P37-201ENST00000411983 438 ntBASIC4.02□□□□□ -1.77
CX3CR1P49238 AL160275.2-201ENST00000412010 394 ntBASIC4.02□□□□□ -1.77
CX3CR1P49238 BX510359.2-201ENST00000417920 305 ntBASIC4.02□□□□□ -1.77
CX3CR1P49238 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.02□□□□□ -1.77
CX3CR1P49238 SEC63P1-201ENST00000425785 1258 ntBASIC4.02□□□□□ -1.77
CX3CR1P49238 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC4.02□□□□□ -1.77
CX3CR1P49238 NDUFA5P10-201ENST00000432147 357 ntBASIC4.02□□□□□ -1.77
CX3CR1P49238 Z99127.2-201ENST00000441426 334 ntBASIC4.02□□□□□ -1.77
CX3CR1P49238 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC4.02□□□□□ -1.77
CX3CR1P49238 AC108463.1-201ENST00000450258 347 ntBASIC4.02□□□□□ -1.77
CX3CR1P49238 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC4.02□□□□□ -1.77
CX3CR1P49238 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC4.02□□□□□ -1.77
CX3CR1P49238 ATP5G1P3-201ENST00000463301 410 ntBASIC4.02□□□□□ -1.77
CX3CR1P49238 AC012158.1-204ENST00000483430 465 ntBASIC4.02□□□□□ -1.77
CX3CR1P49238 AC004453.1-201ENST00000487895 408 ntBASIC4.02□□□□□ -1.77
CX3CR1P49238 AC021087.2-201ENST00000504656 1203 ntBASIC4.02□□□□□ -1.77
CX3CR1P49238 PCNAP1-201ENST00000505363 709 ntBASIC4.02□□□□□ -1.77
CX3CR1P49238 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.02□□□□□ -1.77
CX3CR1P49238 UBE2Q2P10-201ENST00000514854 900 ntBASIC4.02□□□□□ -1.77
CX3CR1P49238 AF186190.1-201ENST00000517470 480 ntBASIC4.02□□□□□ -1.77
CX3CR1P49238 SMARCE1P4-201ENST00000523647 241 ntBASIC4.02□□□□□ -1.77
CX3CR1P49238 AP000676.2-201ENST00000529711 301 ntBASIC4.02□□□□□ -1.77
CX3CR1P49238 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC4.02□□□□□ -1.77
CX3CR1P49238 TRAV11-201ENST00000539512 339 ntBASIC4.02□□□□□ -1.77
CX3CR1P49238 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.02□□□□□ -1.77
CX3CR1P49238 AL110118.1-201ENST00000553543 400 ntBASIC4.02□□□□□ -1.77
CX3CR1P49238 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC4.02□□□□□ -1.77
CX3CR1P49238 AL121834.1-201ENST00000572284 509 ntBASIC4.02□□□□□ -1.77
CX3CR1P49238 MIR4646-201ENST00000580775 63 ntBASIC4.02□□□□□ -1.77
CX3CR1P49238 AC110743.1-201ENST00000584870 478 ntBASIC4.02□□□□□ -1.77
CX3CR1P49238 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.02□□□□□ -1.77
CX3CR1P49238 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.02□□□□□ -1.77
CX3CR1P49238 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC4.02□□□□□ -1.77
CX3CR1P49238 AL669942.2-201ENST00000620352 697 ntBASIC4.02□□□□□ -1.77
CX3CR1P49238 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
CX3CR1P49238 AC018445.2-201ENST00000622987 260 ntBASIC4.02□□□□□ -1.77
CX3CR1P49238 U3.53-201ENST00000628922 216 ntBASIC4.02□□□□□ -1.77
CX3CR1P49238 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
CX3CR1P49238 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
CX3CR1P49238 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.02□□□□□ -1.77
CX3CR1P49238 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CX3CR1P49238 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.02□□□□□ -1.77
CX3CR1P49238 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.02□□□□□ -1.77
CX3CR1P49238 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC4.02□□□□□ -1.77
CX3CR1P49238 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC4.02□□□□□ -1.77
CX3CR1P49238 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
CX3CR1P49238 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.02□□□□□ -1.77
CX3CR1P49238 AC108467.2-201ENST00000617640 1597 ntBASIC4.02□□□□□ -1.77
CX3CR1P49238 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC4.01□□□□□ -1.77
CX3CR1P49238 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CX3CR1P49238 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CX3CR1P49238 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.01□□□□□ -1.77
CX3CR1P49238 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
CX3CR1P49238 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.01□□□□□ -1.77
CX3CR1P49238 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.01□□□□□ -1.77
CX3CR1P49238 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.01□□□□□ -1.77
CX3CR1P49238 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
CX3CR1P49238 MIR448-201ENST00000362131 111 ntBASIC4.01□□□□□ -1.77
CX3CR1P49238 AL645927.1-201ENST00000396783 406 ntBASIC4.01□□□□□ -1.77
CX3CR1P49238 RN7SKP100-201ENST00000411258 284 ntBASIC4.01□□□□□ -1.77
CX3CR1P49238 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.01□□□□□ -1.77
CX3CR1P49238 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.01□□□□□ -1.77
CX3CR1P49238 RPL21P91-201ENST00000429231 479 ntBASIC4.01□□□□□ -1.77
CX3CR1P49238 DYNLL1P7-201ENST00000429273 258 ntBASIC4.01□□□□□ -1.77
CX3CR1P49238 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC4.01□□□□□ -1.77
CX3CR1P49238 PSMD10P3-201ENST00000437000 448 ntBASIC4.01□□□□□ -1.77
CX3CR1P49238 AC005154.2-201ENST00000438110 379 ntBASIC4.01□□□□□ -1.77
CX3CR1P49238 AC011753.3-201ENST00000443436 406 ntBASIC4.01□□□□□ -1.77
CX3CR1P49238 IFNWP4-201ENST00000453148 294 ntBASIC4.01□□□□□ -1.77
CX3CR1P49238 ISCUP1-201ENST00000454451 448 ntBASIC4.01□□□□□ -1.77
CX3CR1P49238 AC091685.2-201ENST00000454924 864 ntBASIC4.01□□□□□ -1.77
CX3CR1P49238 RNU7-27P-201ENST00000459281 62 ntBASIC4.01□□□□□ -1.77
CX3CR1P49238 AC006967.1-201ENST00000467608 589 ntBASIC4.01□□□□□ -1.77
CX3CR1P49238 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CX3CR1P49238 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.01□□□□□ -1.77
CX3CR1P49238 ACTR6P1-201ENST00000514311 1104 ntBASIC4.01□□□□□ -1.77
CX3CR1P49238 RNU6-1308P-201ENST00000516817 103 ntBASIC4.01□□□□□ -1.77
CX3CR1P49238 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.01□□□□□ -1.77
CX3CR1P49238 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC4.01□□□□□ -1.77
CX3CR1P49238 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.01□□□□□ -1.77
CX3CR1P49238 PDCD5P1-201ENST00000543528 309 ntBASIC4.01□□□□□ -1.77
CX3CR1P49238 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC4.01□□□□□ -1.77
CX3CR1P49238 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CX3CR1P49238 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.01□□□□□ -1.77
CX3CR1P49238 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC4.01□□□□□ -1.77
CX3CR1P49238 AC105129.1-201ENST00000560250 297 ntBASIC4.01□□□□□ -1.77
CX3CR1P49238 AC044860.2-201ENST00000561005 179 ntBASIC4.01□□□□□ -1.77
CX3CR1P49238 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 178.7 ms