Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC5.12□□□□□ -1.59
NEDD4P46934 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC5.12□□□□□ -1.59
NEDD4P46934 AC083809.1-201ENST00000615051 472 ntBASIC5.12□□□□□ -1.59
NEDD4P46934 AC114781.5-201ENST00000615297 108 ntBASIC5.12□□□□□ -1.59
NEDD4P46934 AL021997.2-201ENST00000615674 271 ntBASIC5.12□□□□□ -1.59
NEDD4P46934 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC5.12□□□□□ -1.59
NEDD4P46934 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
NEDD4P46934 CCL14-204ENST00000622526 472 ntTSL 3 BASIC5.12□□□□□ -1.59
NEDD4P46934 MIR6810-201ENST00000622701 70 ntBASIC5.12□□□□□ -1.59
NEDD4P46934 AL118508.4-201ENST00000624142 1176 ntBASIC5.12□□□□□ -1.59
NEDD4P46934 AL158163.1-201ENST00000603915 1649 ntBASIC5.12□□□□□ -1.59
NEDD4P46934 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC5.12□□□□□ -1.59
NEDD4P46934 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
NEDD4P46934 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
NEDD4P46934 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.12□□□□□ -1.59
NEDD4P46934 MAPK10-253ENST00000641010 4072 ntBASIC5.12□□□□□ -1.59
NEDD4P46934 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
NEDD4P46934 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
NEDD4P46934 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
NEDD4P46934 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC5.11□□□□□ -1.59
NEDD4P46934 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
NEDD4P46934 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.11□□□□□ -1.59
NEDD4P46934 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
NEDD4P46934 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
NEDD4P46934 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
NEDD4P46934 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
NEDD4P46934 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
NEDD4P46934 ADIG-201ENST00000373348 430 ntTSL 2 BASIC5.11□□□□□ -1.59
NEDD4P46934 AC009237.10-201ENST00000414112 510 ntBASIC5.11□□□□□ -1.59
NEDD4P46934 GAPDHP49-201ENST00000421421 961 ntBASIC5.11□□□□□ -1.59
NEDD4P46934 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC5.11□□□□□ -1.59
NEDD4P46934 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC5.11□□□□□ -1.59
NEDD4P46934 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
NEDD4P46934 RPL7P33-201ENST00000444159 742 ntBASIC5.11□□□□□ -1.59
NEDD4P46934 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
NEDD4P46934 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC5.11□□□□□ -1.59
NEDD4P46934 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC5.11□□□□□ -1.59
NEDD4P46934 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC5.11□□□□□ -1.59
NEDD4P46934 RPL21P6-201ENST00000479171 504 ntBASIC5.11□□□□□ -1.59
NEDD4P46934 RN7SL812P-201ENST00000493791 279 ntBASIC5.11□□□□□ -1.59
NEDD4P46934 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC5.11□□□□□ -1.59
NEDD4P46934 AC083829.1-201ENST00000503756 657 ntBASIC5.11□□□□□ -1.59
NEDD4P46934 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC5.11□□□□□ -1.59
NEDD4P46934 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC5.11□□□□□ -1.59
NEDD4P46934 HPRT1P1-201ENST00000509498 657 ntBASIC5.11□□□□□ -1.59
NEDD4P46934 TCP11X3P-202ENST00000514289 1254 ntBASIC5.11□□□□□ -1.59
NEDD4P46934 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC5.11□□□□□ -1.59
NEDD4P46934 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC5.11□□□□□ -1.59
NEDD4P46934 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC5.11□□□□□ -1.59
NEDD4P46934 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC5.11□□□□□ -1.59
NEDD4P46934 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC5.11□□□□□ -1.59
NEDD4P46934 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC5.11□□□□□ -1.59
NEDD4P46934 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC5.11□□□□□ -1.59
NEDD4P46934 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC5.11□□□□□ -1.59
NEDD4P46934 BX322635.1-201ENST00000605804 496 ntBASIC5.11□□□□□ -1.59
NEDD4P46934 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC5.11□□□□□ -1.59
NEDD4P46934 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC5.11□□□□□ -1.59
NEDD4P46934 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC5.11□□□□□ -1.59
NEDD4P46934 AL590410.1-201ENST00000617925 333 ntBASIC5.11□□□□□ -1.59
NEDD4P46934 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
NEDD4P46934 AC008013.2-202ENST00000637965 364 ntBASIC5.11□□□□□ -1.59
NEDD4P46934 AL139254.3-201ENST00000641097 674 ntBASIC5.11□□□□□ -1.59
NEDD4P46934 AL596275.2-204ENST00000641628 552 ntBASIC5.11□□□□□ -1.59
NEDD4P46934 AL596275.2-206ENST00000641957 626 ntBASIC5.11□□□□□ -1.59
NEDD4P46934 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
NEDD4P46934 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
NEDD4P46934 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
NEDD4P46934 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
NEDD4P46934 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
NEDD4P46934 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
NEDD4P46934 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
NEDD4P46934 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
NEDD4P46934 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
NEDD4P46934 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
NEDD4P46934 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC5.11□□□□□ -1.59
NEDD4P46934 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC5.11□□□□□ -1.59
NEDD4P46934 DLD-204ENST00000437604 1859 ntTSL 2 BASIC5.1□□□□□ -1.59
NEDD4P46934 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
NEDD4P46934 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
NEDD4P46934 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC5.1□□□□□ -1.59
NEDD4P46934 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
NEDD4P46934 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
NEDD4P46934 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
NEDD4P46934 OR5T3-201ENST00000303059 1023 ntBASIC5.1□□□□□ -1.59
NEDD4P46934 RNU6-386P-201ENST00000362650 107 ntBASIC5.1□□□□□ -1.59
NEDD4P46934 RNA5SP22-201ENST00000365393 109 ntBASIC5.1□□□□□ -1.59
NEDD4P46934 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC5.1□□□□□ -1.59
NEDD4P46934 AL356968.2-201ENST00000412769 1257 ntBASIC5.1□□□□□ -1.59
NEDD4P46934 XIST-201ENST00000416330 750 ntTSL 2 BASIC5.1□□□□□ -1.59
NEDD4P46934 AL157831.1-201ENST00000426134 473 ntBASIC5.1□□□□□ -1.59
NEDD4P46934 BTBD7P2-201ENST00000441962 620 ntBASIC5.1□□□□□ -1.59
NEDD4P46934 AC109327.1-201ENST00000471666 403 ntBASIC5.1□□□□□ -1.59
NEDD4P46934 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC5.1□□□□□ -1.59
NEDD4P46934 OR52A4P-202ENST00000481634 799 ntBASIC5.1□□□□□ -1.59
NEDD4P46934 AC117525.1-201ENST00000515228 503 ntBASIC5.1□□□□□ -1.59
NEDD4P46934 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC5.1□□□□□ -1.59
NEDD4P46934 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
NEDD4P46934 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC5.1□□□□□ -1.59
NEDD4P46934 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC5.1□□□□□ -1.59
NEDD4P46934 AC023575.1-201ENST00000580510 358 ntBASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms