Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 RN7SKP247-201ENST00000411094 308 ntBASIC4.18□□□□□ -1.74
NKX2-1P43699 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC4.18□□□□□ -1.74
NKX2-1P43699 OR2AT2P-201ENST00000413438 905 ntBASIC4.18□□□□□ -1.74
NKX2-1P43699 RPL34P3-201ENST00000421454 338 ntBASIC4.18□□□□□ -1.74
NKX2-1P43699 AC246680.2-201ENST00000422106 389 ntBASIC4.18□□□□□ -1.74
NKX2-1P43699 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC4.18□□□□□ -1.74
NKX2-1P43699 RPL12P34-201ENST00000424532 479 ntBASIC4.18□□□□□ -1.74
NKX2-1P43699 AL158073.1-201ENST00000426848 1104 ntBASIC4.18□□□□□ -1.74
NKX2-1P43699 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.18□□□□□ -1.74
NKX2-1P43699 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC4.18□□□□□ -1.74
NKX2-1P43699 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.18□□□□□ -1.74
NKX2-1P43699 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC4.18□□□□□ -1.74
NKX2-1P43699 RPL7AP61-201ENST00000443410 636 ntBASIC4.18□□□□□ -1.74
NKX2-1P43699 HMGN1P2-201ENST00000445197 310 ntBASIC4.18□□□□□ -1.74
NKX2-1P43699 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC4.18□□□□□ -1.74
NKX2-1P43699 EXOSC3P1-201ENST00000448649 500 ntBASIC4.18□□□□□ -1.74
NKX2-1P43699 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC4.18□□□□□ -1.74
NKX2-1P43699 AL606490.1-201ENST00000452266 765 ntBASIC4.18□□□□□ -1.74
NKX2-1P43699 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC4.18□□□□□ -1.74
NKX2-1P43699 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
NKX2-1P43699 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC4.18□□□□□ -1.74
NKX2-1P43699 AC006511.1-201ENST00000470614 315 ntBASIC4.18□□□□□ -1.74
NKX2-1P43699 EEF1A1P25-201ENST00000495704 1267 ntBASIC4.18□□□□□ -1.74
NKX2-1P43699 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC4.18□□□□□ -1.74
NKX2-1P43699 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
NKX2-1P43699 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC4.18□□□□□ -1.74
NKX2-1P43699 ENPP7P9-201ENST00000514456 627 ntBASIC4.18□□□□□ -1.74
NKX2-1P43699 RNU6-1028P-201ENST00000517164 93 ntBASIC4.18□□□□□ -1.74
NKX2-1P43699 CYCSP22-201ENST00000517555 339 ntBASIC4.18□□□□□ -1.74
NKX2-1P43699 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.18□□□□□ -1.74
NKX2-1P43699 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC4.18□□□□□ -1.74
NKX2-1P43699 AC091163.3-201ENST00000518269 1144 ntBASIC4.18□□□□□ -1.74
NKX2-1P43699 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC4.18□□□□□ -1.74
NKX2-1P43699 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC4.18□□□□□ -1.74
NKX2-1P43699 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC4.18□□□□□ -1.74
NKX2-1P43699 SMARCE1P4-201ENST00000523647 241 ntBASIC4.18□□□□□ -1.74
NKX2-1P43699 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC4.18□□□□□ -1.74
NKX2-1P43699 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC4.18□□□□□ -1.74
NKX2-1P43699 AL132857.1-201ENST00000555180 708 ntBASIC4.18□□□□□ -1.74
NKX2-1P43699 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC4.18□□□□□ -1.74
NKX2-1P43699 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC4.18□□□□□ -1.74
NKX2-1P43699 AC023824.3-201ENST00000569003 562 ntBASIC4.18□□□□□ -1.74
NKX2-1P43699 AC233702.9-201ENST00000581528 203 ntBASIC4.18□□□□□ -1.74
NKX2-1P43699 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC4.18□□□□□ -1.74
NKX2-1P43699 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC4.18□□□□□ -1.74
NKX2-1P43699 AC013468.1-201ENST00000608680 598 ntBASIC4.18□□□□□ -1.74
NKX2-1P43699 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.18□□□□□ -1.74
NKX2-1P43699 AC097505.1-201ENST00000610199 565 ntBASIC4.18□□□□□ -1.74
NKX2-1P43699 AC009318.3-201ENST00000616916 503 ntBASIC4.18□□□□□ -1.74
NKX2-1P43699 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC4.18□□□□□ -1.74
NKX2-1P43699 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC4.18□□□□□ -1.74
NKX2-1P43699 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC4.18□□□□□ -1.74
NKX2-1P43699 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
NKX2-1P43699 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
NKX2-1P43699 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
NKX2-1P43699 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.18□□□□□ -1.74
NKX2-1P43699 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
NKX2-1P43699 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.18□□□□□ -1.74
NKX2-1P43699 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
NKX2-1P43699 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
NKX2-1P43699 AC119744.1-201ENST00000454746 1715 ntBASIC4.18□□□□□ -1.74
NKX2-1P43699 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
NKX2-1P43699 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
NKX2-1P43699 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
NKX2-1P43699 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
NKX2-1P43699 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
NKX2-1P43699 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
NKX2-1P43699 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
NKX2-1P43699 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
NKX2-1P43699 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
NKX2-1P43699 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
NKX2-1P43699 OR13C1P-202ENST00000641378 2919 ntBASIC4.17□□□□□ -1.74
NKX2-1P43699 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
NKX2-1P43699 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC4.17□□□□□ -1.74
NKX2-1P43699 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
NKX2-1P43699 RNU6-146P-201ENST00000384602 108 ntBASIC4.17□□□□□ -1.74
NKX2-1P43699 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC4.17□□□□□ -1.74
NKX2-1P43699 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC4.17□□□□□ -1.74
NKX2-1P43699 TMBIM7P-201ENST00000418074 855 ntBASIC4.17□□□□□ -1.74
NKX2-1P43699 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC4.17□□□□□ -1.74
NKX2-1P43699 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC4.17□□□□□ -1.74
NKX2-1P43699 AL035246.1-201ENST00000433554 1255 ntBASIC4.17□□□□□ -1.74
NKX2-1P43699 RPL12P46-201ENST00000436610 195 ntBASIC4.17□□□□□ -1.74
NKX2-1P43699 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC4.17□□□□□ -1.74
NKX2-1P43699 PCNPP2-201ENST00000441651 455 ntBASIC4.17□□□□□ -1.74
NKX2-1P43699 RPS11P7-201ENST00000442125 465 ntBASIC4.17□□□□□ -1.74
NKX2-1P43699 AC019185.1-201ENST00000442718 389 ntBASIC4.17□□□□□ -1.74
NKX2-1P43699 NDUFAF4P2-201ENST00000445374 520 ntBASIC4.17□□□□□ -1.74
NKX2-1P43699 AL929288.2-201ENST00000446368 407 ntBASIC4.17□□□□□ -1.74
NKX2-1P43699 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.17□□□□□ -1.74
NKX2-1P43699 AC239809.1-201ENST00000450470 217 ntBASIC4.17□□□□□ -1.74
NKX2-1P43699 AC104634.1-201ENST00000452720 462 ntBASIC4.17□□□□□ -1.74
NKX2-1P43699 DNAJC19P8-201ENST00000452887 259 ntBASIC4.17□□□□□ -1.74
NKX2-1P43699 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC4.17□□□□□ -1.74
NKX2-1P43699 AC020890.1-201ENST00000491837 504 ntBASIC4.17□□□□□ -1.74
NKX2-1P43699 AC098862.1-201ENST00000504991 413 ntBASIC4.17□□□□□ -1.74
NKX2-1P43699 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.17□□□□□ -1.74
NKX2-1P43699 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC4.17□□□□□ -1.74
NKX2-1P43699 RNU6-276P-201ENST00000516114 96 ntBASIC4.17□□□□□ -1.74
NKX2-1P43699 RNU6-941P-201ENST00000516346 108 ntBASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms