Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 RNA5SP146-201ENST00000410743 123 ntBASIC4.51□□□□□ -1.69
HMGCLP35914 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.51□□□□□ -1.69
HMGCLP35914 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC4.51□□□□□ -1.69
HMGCLP35914 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.51□□□□□ -1.69
HMGCLP35914 AC062016.2-201ENST00000420950 676 ntBASIC4.51□□□□□ -1.69
HMGCLP35914 AP001324.1-201ENST00000428553 399 ntBASIC4.51□□□□□ -1.69
HMGCLP35914 RAB28P3-201ENST00000448325 597 ntBASIC4.51□□□□□ -1.69
HMGCLP35914 AC012671.1-201ENST00000451912 203 ntBASIC4.51□□□□□ -1.69
HMGCLP35914 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC4.51□□□□□ -1.69
HMGCLP35914 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
HMGCLP35914 RPL5P30-201ENST00000465511 891 ntBASIC4.51□□□□□ -1.69
HMGCLP35914 RPS23P1-201ENST00000491662 432 ntBASIC4.51□□□□□ -1.69
HMGCLP35914 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC4.51□□□□□ -1.69
HMGCLP35914 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.51□□□□□ -1.69
HMGCLP35914 ACTR6P1-201ENST00000514311 1104 ntBASIC4.51□□□□□ -1.69
HMGCLP35914 EIF4A2P3-201ENST00000525903 1055 ntBASIC4.51□□□□□ -1.69
HMGCLP35914 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
HMGCLP35914 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
HMGCLP35914 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.51□□□□□ -1.69
HMGCLP35914 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC4.51□□□□□ -1.69
HMGCLP35914 AC084783.1-201ENST00000565846 910 ntBASIC4.51□□□□□ -1.69
HMGCLP35914 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.51□□□□□ -1.69
HMGCLP35914 AC008782.1-201ENST00000603386 430 ntBASIC4.51□□□□□ -1.69
HMGCLP35914 AC115286.1-201ENST00000604298 434 ntBASIC4.51□□□□□ -1.69
HMGCLP35914 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.51□□□□□ -1.69
HMGCLP35914 AC007620.3-201ENST00000608131 497 ntBASIC4.51□□□□□ -1.69
HMGCLP35914 AC005086.4-201ENST00000623065 213 ntBASIC4.51□□□□□ -1.69
HMGCLP35914 AC091905.2-201ENST00000623143 306 ntBASIC4.51□□□□□ -1.69
HMGCLP35914 LINC01808-202ENST00000641680 1116 ntBASIC4.51□□□□□ -1.69
HMGCLP35914 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.51□□□□□ -1.69
HMGCLP35914 AL592148.3-201ENST00000608771 2646 ntBASIC4.51□□□□□ -1.69
HMGCLP35914 AP001002.1-201ENST00000625148 1513 ntBASIC4.51□□□□□ -1.69
HMGCLP35914 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.51□□□□□ -1.69
HMGCLP35914 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
HMGCLP35914 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.5□□□□□ -1.69
HMGCLP35914 AC139769.1-204ENST00000472297 1931 ntBASIC4.5□□□□□ -1.69
HMGCLP35914 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
HMGCLP35914 OR56B2P-202ENST00000641377 2453 ntBASIC4.5□□□□□ -1.69
HMGCLP35914 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
HMGCLP35914 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
HMGCLP35914 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
HMGCLP35914 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
HMGCLP35914 IL6STP1-201ENST00000346911 1020 ntBASIC4.5□□□□□ -1.69
HMGCLP35914 MIR365B-201ENST00000362317 111 ntBASIC4.5□□□□□ -1.69
HMGCLP35914 RNA5SP505-201ENST00000364748 108 ntBASIC4.5□□□□□ -1.69
HMGCLP35914 MIR129-1-201ENST00000384972 72 ntBASIC4.5□□□□□ -1.69
HMGCLP35914 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.5□□□□□ -1.69
HMGCLP35914 GLULP6-201ENST00000399502 913 ntBASIC4.5□□□□□ -1.69
HMGCLP35914 RPL37P18-201ENST00000411602 243 ntBASIC4.5□□□□□ -1.69
HMGCLP35914 USP9YP19-201ENST00000412165 485 ntBASIC4.5□□□□□ -1.69
HMGCLP35914 TRIM60P17-201ENST00000415181 719 ntBASIC4.5□□□□□ -1.69
HMGCLP35914 RAB9AP4-201ENST00000415230 609 ntBASIC4.5□□□□□ -1.69
HMGCLP35914 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC4.5□□□□□ -1.69
HMGCLP35914 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC4.5□□□□□ -1.69
HMGCLP35914 AC006065.1-201ENST00000422539 802 ntBASIC4.5□□□□□ -1.69
HMGCLP35914 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.5□□□□□ -1.69
HMGCLP35914 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC4.5□□□□□ -1.69
HMGCLP35914 RPL23AP1-201ENST00000428990 471 ntBASIC4.5□□□□□ -1.69
HMGCLP35914 RPL23AP25-201ENST00000430973 463 ntBASIC4.5□□□□□ -1.69
HMGCLP35914 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.5□□□□□ -1.69
HMGCLP35914 AC114878.1-201ENST00000441166 358 ntBASIC4.5□□□□□ -1.69
HMGCLP35914 TXNP2-201ENST00000443918 295 ntBASIC4.5□□□□□ -1.69
HMGCLP35914 ARL2BPP10-201ENST00000446487 531 ntBASIC4.5□□□□□ -1.69
HMGCLP35914 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.5□□□□□ -1.69
HMGCLP35914 AC022431.1-201ENST00000450941 438 ntBASIC4.5□□□□□ -1.69
HMGCLP35914 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.5□□□□□ -1.69
HMGCLP35914 C1DP3-201ENST00000455013 423 ntBASIC4.5□□□□□ -1.69
HMGCLP35914 APOOP2-201ENST00000461561 539 ntBASIC4.5□□□□□ -1.69
HMGCLP35914 AC022336.1-201ENST00000475510 337 ntBASIC4.5□□□□□ -1.69
HMGCLP35914 AC008897.1-201ENST00000494006 347 ntBASIC4.5□□□□□ -1.69
HMGCLP35914 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.5□□□□□ -1.69
HMGCLP35914 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
HMGCLP35914 PGBD4P4-201ENST00000509673 613 ntBASIC4.5□□□□□ -1.69
HMGCLP35914 RN7SKP92-201ENST00000517266 244 ntBASIC4.5□□□□□ -1.69
HMGCLP35914 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC4.5□□□□□ -1.69
HMGCLP35914 AC087272.1-201ENST00000523624 533 ntBASIC4.5□□□□□ -1.69
HMGCLP35914 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC4.5□□□□□ -1.69
HMGCLP35914 AP003168.1-201ENST00000530091 307 ntBASIC4.5□□□□□ -1.69
HMGCLP35914 CYCSP28-201ENST00000534284 321 ntBASIC4.5□□□□□ -1.69
HMGCLP35914 OR5AN2P-201ENST00000534535 896 ntBASIC4.5□□□□□ -1.69
HMGCLP35914 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.5□□□□□ -1.69
HMGCLP35914 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC4.5□□□□□ -1.69
HMGCLP35914 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.5□□□□□ -1.69
HMGCLP35914 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.5□□□□□ -1.69
HMGCLP35914 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC4.5□□□□□ -1.69
HMGCLP35914 AC090181.2-201ENST00000602975 672 ntBASIC4.5□□□□□ -1.69
HMGCLP35914 AC067838.1-201ENST00000606064 577 ntBASIC4.5□□□□□ -1.69
HMGCLP35914 AC019193.2-201ENST00000610012 634 ntBASIC4.5□□□□□ -1.69
HMGCLP35914 AC104307.1-201ENST00000616142 196 ntBASIC4.5□□□□□ -1.69
HMGCLP35914 AL158196.1-201ENST00000616786 434 ntBASIC4.5□□□□□ -1.69
HMGCLP35914 AP005019.3-201ENST00000620418 560 ntBASIC4.5□□□□□ -1.69
HMGCLP35914 AL023881.1-201ENST00000621088 301 ntBASIC4.5□□□□□ -1.69
HMGCLP35914 CFTRP2-201ENST00000634304 199 ntBASIC4.5□□□□□ -1.69
HMGCLP35914 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.5□□□□□ -1.69
HMGCLP35914 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.5□□□□□ -1.69
HMGCLP35914 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
HMGCLP35914 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.5□□□□□ -1.69
HMGCLP35914 AL132640.2-201ENST00000559968 1698 ntBASIC4.5□□□□□ -1.69
HMGCLP35914 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
HMGCLP35914 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms