Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC6.2□□□□□ -1.42
CNGA1P29973 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC6.2□□□□□ -1.42
CNGA1P29973 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC6.2□□□□□ -1.42
CNGA1P29973 VN1R84P-201ENST00000593697 235 ntBASIC6.2□□□□□ -1.42
CNGA1P29973 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC6.2□□□□□ -1.42
CNGA1P29973 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC6.2□□□□□ -1.42
CNGA1P29973 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC6.2□□□□□ -1.42
CNGA1P29973 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC6.2□□□□□ -1.42
CNGA1P29973 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC6.2□□□□□ -1.42
CNGA1P29973 AL353726.1-201ENST00000614041 1000 ntBASIC6.2□□□□□ -1.42
CNGA1P29973 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CNGA1P29973 AL162574.1-201ENST00000615702 950 ntBASIC6.2□□□□□ -1.42
CNGA1P29973 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC6.2□□□□□ -1.42
CNGA1P29973 AC091953.3-201ENST00000623220 236 ntBASIC6.2□□□□□ -1.42
CNGA1P29973 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC6.2□□□□□ -1.42
CNGA1P29973 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CNGA1P29973 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
CNGA1P29973 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
CNGA1P29973 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CNGA1P29973 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC6.2□□□□□ -1.42
CNGA1P29973 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CNGA1P29973 AC025263.3-201ENST00000622965 1396 ntBASIC6.19□□□□□ -1.42
CNGA1P29973 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
CNGA1P29973 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CNGA1P29973 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
CNGA1P29973 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC6.19□□□□□ -1.42
CNGA1P29973 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CNGA1P29973 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
CNGA1P29973 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
CNGA1P29973 AC010329.2-201ENST00000595195 2737 ntBASIC6.19□□□□□ -1.42
CNGA1P29973 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CNGA1P29973 RN7SKP126-201ENST00000411143 300 ntBASIC6.19□□□□□ -1.42
CNGA1P29973 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC6.19□□□□□ -1.42
CNGA1P29973 AC211486.3-201ENST00000412694 621 ntBASIC6.19□□□□□ -1.42
CNGA1P29973 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CNGA1P29973 AL807761.1-201ENST00000417622 171 ntBASIC6.19□□□□□ -1.42
CNGA1P29973 TRGV6-201ENST00000417928 299 ntBASIC6.19□□□□□ -1.42
CNGA1P29973 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC6.19□□□□□ -1.42
CNGA1P29973 REREP1Y-201ENST00000422655 198 ntBASIC6.19□□□□□ -1.42
CNGA1P29973 SRSF1P1-201ENST00000424058 520 ntBASIC6.19□□□□□ -1.42
CNGA1P29973 AC093655.2-201ENST00000425735 631 ntBASIC6.19□□□□□ -1.42
CNGA1P29973 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC6.19□□□□□ -1.42
CNGA1P29973 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC6.19□□□□□ -1.42
CNGA1P29973 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC6.19□□□□□ -1.42
CNGA1P29973 REREP2Y-201ENST00000439103 200 ntBASIC6.19□□□□□ -1.42
CNGA1P29973 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC6.19□□□□□ -1.42
CNGA1P29973 CEACAMP9-201ENST00000442990 513 ntBASIC6.19□□□□□ -1.42
CNGA1P29973 RPL21P133-201ENST00000443666 476 ntBASIC6.19□□□□□ -1.42
CNGA1P29973 AC007327.1-201ENST00000447461 264 ntBASIC6.19□□□□□ -1.42
CNGA1P29973 DAP3-209ENST00000465375 729 ntTSL 2 BASIC6.19□□□□□ -1.42
CNGA1P29973 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC6.19□□□□□ -1.42
CNGA1P29973 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CNGA1P29973 AC093534.1-201ENST00000504977 132 ntBASIC6.19□□□□□ -1.42
CNGA1P29973 RNU6-347P-201ENST00000516658 105 ntBASIC6.19□□□□□ -1.42
CNGA1P29973 RN7SKP147-201ENST00000517154 244 ntBASIC6.19□□□□□ -1.42
CNGA1P29973 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC6.19□□□□□ -1.42
CNGA1P29973 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC6.19□□□□□ -1.42
CNGA1P29973 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC6.19□□□□□ -1.42
CNGA1P29973 AC127381.1-201ENST00000555979 939 ntBASIC6.19□□□□□ -1.42
CNGA1P29973 AC009094.1-201ENST00000564443 426 ntBASIC6.19□□□□□ -1.42
CNGA1P29973 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC6.19□□□□□ -1.42
CNGA1P29973 AP005403.1-201ENST00000579720 229 ntBASIC6.19□□□□□ -1.42
CNGA1P29973 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC6.19□□□□□ -1.42
CNGA1P29973 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC6.19□□□□□ -1.42
CNGA1P29973 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC6.19□□□□□ -1.42
CNGA1P29973 FAM25E-202ENST00000608562 189 ntBASIC6.19□□□□□ -1.42
CNGA1P29973 PACRG-210ENST00000611387 279 ntTSL 5 BASIC6.19□□□□□ -1.42
CNGA1P29973 CDRT1-208ENST00000630868 794 ntBASIC6.19□□□□□ -1.42
CNGA1P29973 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
CNGA1P29973 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
CNGA1P29973 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CNGA1P29973 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC6.19□□□□□ -1.42
CNGA1P29973 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC6.19□□□□□ -1.42
CNGA1P29973 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC6.19□□□□□ -1.42
CNGA1P29973 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CNGA1P29973 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
CNGA1P29973 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC6.18□□□□□ -1.42
CNGA1P29973 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC6.18□□□□□ -1.42
CNGA1P29973 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CNGA1P29973 MAPK10-338ENST00000641647 3362 ntBASIC6.18□□□□□ -1.42
CNGA1P29973 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CNGA1P29973 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
CNGA1P29973 NACA3P-201ENST00000359690 648 ntBASIC6.18□□□□□ -1.42
CNGA1P29973 U3.10-201ENST00000364459 214 ntBASIC6.18□□□□□ -1.42
CNGA1P29973 ATP5F1P2-201ENST00000398143 760 ntBASIC6.18□□□□□ -1.42
CNGA1P29973 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC6.18□□□□□ -1.42
CNGA1P29973 AL049545.1-201ENST00000401856 572 ntBASIC6.18□□□□□ -1.42
CNGA1P29973 AL590084.1-201ENST00000407885 387 ntBASIC6.18□□□□□ -1.42
CNGA1P29973 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
CNGA1P29973 AC096921.1-201ENST00000411661 375 ntBASIC6.18□□□□□ -1.42
CNGA1P29973 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC6.18□□□□□ -1.42
CNGA1P29973 RNF10P1-201ENST00000418589 369 ntBASIC6.18□□□□□ -1.42
CNGA1P29973 CNOT7P1-201ENST00000429006 852 ntBASIC6.18□□□□□ -1.42
CNGA1P29973 BX276092.6-201ENST00000430476 250 ntBASIC6.18□□□□□ -1.42
CNGA1P29973 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC6.18□□□□□ -1.42
CNGA1P29973 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC6.18□□□□□ -1.42
CNGA1P29973 BX276092.8-201ENST00000455722 250 ntBASIC6.18□□□□□ -1.42
CNGA1P29973 AC090114.3-201ENST00000479267 829 ntBASIC6.18□□□□□ -1.42
CNGA1P29973 AC084024.2-201ENST00000503480 791 ntBASIC6.18□□□□□ -1.42
CNGA1P29973 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms