Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 RPL23AP52-201ENST00000439311 478 ntBASIC3.69□□□□□ -1.82
COL8A2P25067 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC3.69□□□□□ -1.82
COL8A2P25067 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
COL8A2P25067 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
COL8A2P25067 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC3.69□□□□□ -1.82
COL8A2P25067 RPL7AP52-201ENST00000458096 790 ntBASIC3.69□□□□□ -1.82
COL8A2P25067 FTH1P2-201ENST00000466086 412 ntBASIC3.69□□□□□ -1.82
COL8A2P25067 RPL35AP15-201ENST00000468042 339 ntBASIC3.69□□□□□ -1.82
COL8A2P25067 AC041039.1-201ENST00000485656 536 ntBASIC3.69□□□□□ -1.82
COL8A2P25067 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC3.69□□□□□ -1.82
COL8A2P25067 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC3.69□□□□□ -1.82
COL8A2P25067 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC3.69□□□□□ -1.82
COL8A2P25067 OR5BC1P-201ENST00000529327 739 ntBASIC3.69□□□□□ -1.82
COL8A2P25067 AP001804.2-201ENST00000533932 910 ntBASIC3.69□□□□□ -1.82
COL8A2P25067 TOMM20P2-201ENST00000540082 421 ntBASIC3.69□□□□□ -1.82
COL8A2P25067 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC3.69□□□□□ -1.82
COL8A2P25067 AL358913.1-201ENST00000554342 121 ntBASIC3.69□□□□□ -1.82
COL8A2P25067 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC3.69□□□□□ -1.82
COL8A2P25067 RN7SL176P-201ENST00000580352 264 ntBASIC3.69□□□□□ -1.82
COL8A2P25067 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC3.69□□□□□ -1.82
COL8A2P25067 AC234782.5-201ENST00000617723 324 ntBASIC3.69□□□□□ -1.82
COL8A2P25067 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC3.69□□□□□ -1.82
COL8A2P25067 MIR3653-201ENST00000625572 110 ntBASIC3.69□□□□□ -1.82
COL8A2P25067 AL158163.1-201ENST00000603915 1649 ntBASIC3.69□□□□□ -1.82
COL8A2P25067 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
COL8A2P25067 SCN1A-220ENST00000641603 12506 ntBASIC3.69□□□□□ -1.82
COL8A2P25067 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
COL8A2P25067 MAPK10-303ENST00000641324 3959 ntBASIC3.69□□□□□ -1.82
COL8A2P25067 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
COL8A2P25067 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
COL8A2P25067 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC3.68□□□□□ -1.82
COL8A2P25067 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
COL8A2P25067 AC139713.2-215ENST00000641428 5037 ntBASIC3.68□□□□□ -1.82
COL8A2P25067 AC005261.4-201ENST00000600047 1385 ntBASIC3.68□□□□□ -1.82
COL8A2P25067 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
COL8A2P25067 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
COL8A2P25067 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
COL8A2P25067 AL121657.1-201ENST00000327215 531 ntBASIC3.68□□□□□ -1.82
COL8A2P25067 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC3.68□□□□□ -1.82
COL8A2P25067 ARL4AP3-201ENST00000441452 574 ntBASIC3.68□□□□□ -1.82
COL8A2P25067 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC3.68□□□□□ -1.82
COL8A2P25067 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC3.68□□□□□ -1.82
COL8A2P25067 UQCRHP4-201ENST00000471686 272 ntBASIC3.68□□□□□ -1.82
COL8A2P25067 AL161747.1-201ENST00000480068 358 ntBASIC3.68□□□□□ -1.82
COL8A2P25067 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC3.68□□□□□ -1.82
COL8A2P25067 AC113430.1-201ENST00000506872 718 ntBASIC3.68□□□□□ -1.82
COL8A2P25067 DERA-209ENST00000532964 854 ntTSL 5 BASIC3.68□□□□□ -1.82
COL8A2P25067 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC3.68□□□□□ -1.82
COL8A2P25067 MEG8-217ENST00000556637 924 ntTSL 5 BASIC3.68□□□□□ -1.82
COL8A2P25067 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC3.68□□□□□ -1.82
COL8A2P25067 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC3.68□□□□□ -1.82
COL8A2P25067 AC020910.2-201ENST00000603635 610 ntBASIC3.68□□□□□ -1.82
COL8A2P25067 AL160290.3-201ENST00000604869 165 ntBASIC3.68□□□□□ -1.82
COL8A2P25067 AC016252.1-201ENST00000609721 474 ntBASIC3.68□□□□□ -1.82
COL8A2P25067 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC3.68□□□□□ -1.82
COL8A2P25067 HSPD1P14-201ENST00000432666 1618 ntBASIC3.68□□□□□ -1.82
COL8A2P25067 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
COL8A2P25067 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
COL8A2P25067 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC3.68□□□□□ -1.82
COL8A2P25067 AC009951.1-201ENST00000623674 2614 ntBASIC3.68□□□□□ -1.82
COL8A2P25067 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
COL8A2P25067 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
COL8A2P25067 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC3.68□□□□□ -1.82
COL8A2P25067 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
COL8A2P25067 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
COL8A2P25067 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC3.67□□□□□ -1.82
COL8A2P25067 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
COL8A2P25067 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
COL8A2P25067 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC3.67□□□□□ -1.82
COL8A2P25067 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC3.67□□□□□ -1.82
COL8A2P25067 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
COL8A2P25067 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC3.67□□□□□ -1.82
COL8A2P25067 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
COL8A2P25067 AC097374.1-203ENST00000400783 485 ntBASIC3.67□□□□□ -1.82
COL8A2P25067 MIR921-201ENST00000401133 56 ntBASIC3.67□□□□□ -1.82
COL8A2P25067 AL356967.1-201ENST00000406305 431 ntBASIC3.67□□□□□ -1.82
COL8A2P25067 RPL6P29-201ENST00000414863 865 ntBASIC3.67□□□□□ -1.82
COL8A2P25067 AC062016.2-201ENST00000420950 676 ntBASIC3.67□□□□□ -1.82
COL8A2P25067 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC3.67□□□□□ -1.82
COL8A2P25067 NFYAP1-201ENST00000431953 972 ntBASIC3.67□□□□□ -1.82
COL8A2P25067 AC114495.1-201ENST00000441274 436 ntBASIC3.67□□□□□ -1.82
COL8A2P25067 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC3.67□□□□□ -1.82
COL8A2P25067 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC3.67□□□□□ -1.82
COL8A2P25067 NUTF2P7-201ENST00000453086 375 ntBASIC3.67□□□□□ -1.82
COL8A2P25067 DDX39BP2-208ENST00000453923 258 ntBASIC3.67□□□□□ -1.82
COL8A2P25067 ATP5G1P3-201ENST00000463301 410 ntBASIC3.67□□□□□ -1.82
COL8A2P25067 AL672167.3-201ENST00000465951 960 ntBASIC3.67□□□□□ -1.82
COL8A2P25067 RN7SL812P-201ENST00000493791 279 ntBASIC3.67□□□□□ -1.82
COL8A2P25067 AC111000.5-201ENST00000506559 1178 ntBASIC3.67□□□□□ -1.82
COL8A2P25067 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC3.67□□□□□ -1.82
COL8A2P25067 AC021146.3-201ENST00000511911 260 ntBASIC3.67□□□□□ -1.82
COL8A2P25067 IGHVIII-2-1-201ENST00000518843 291 ntBASIC3.67□□□□□ -1.82
COL8A2P25067 KCTD9P6-201ENST00000522306 950 ntBASIC3.67□□□□□ -1.82
COL8A2P25067 OSBPL9P2-201ENST00000526582 1228 ntBASIC3.67□□□□□ -1.82
COL8A2P25067 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC3.67□□□□□ -1.82
COL8A2P25067 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC3.67□□□□□ -1.82
COL8A2P25067 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC3.67□□□□□ -1.82
COL8A2P25067 AC025884.1-201ENST00000556034 378 ntBASIC3.67□□□□□ -1.82
COL8A2P25067 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC3.67□□□□□ -1.82
COL8A2P25067 AC124856.1-201ENST00000600819 896 ntBASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms