Protein–RNA interactions for Protein: P23560

BDNF, Brain-derived neurotrophic factor, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BDNFP23560 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.35□□□□□ -1.55
BDNFP23560 MIR16-2-201ENST00000362117 81 ntBASIC5.35□□□□□ -1.55
BDNFP23560 RN7SKP95-201ENST00000362860 303 ntBASIC5.35□□□□□ -1.55
BDNFP23560 RNA5SP391-201ENST00000363456 119 ntBASIC5.35□□□□□ -1.55
BDNFP23560 RNU6-792P-201ENST00000363490 107 ntBASIC5.35□□□□□ -1.55
BDNFP23560 MIR525-201ENST00000384978 85 ntBASIC5.35□□□□□ -1.55
BDNFP23560 RNU6-796P-201ENST00000391086 107 ntBASIC5.35□□□□□ -1.55
BDNFP23560 MIR937-201ENST00000401271 86 ntBASIC5.35□□□□□ -1.55
BDNFP23560 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
BDNFP23560 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC5.35□□□□□ -1.55
BDNFP23560 HYALP1-201ENST00000417674 1279 ntBASIC5.35□□□□□ -1.55
BDNFP23560 AL606495.1-201ENST00000422100 813 ntBASIC5.35□□□□□ -1.55
BDNFP23560 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC5.35□□□□□ -1.55
BDNFP23560 AC092809.1-201ENST00000441469 474 ntBASIC5.35□□□□□ -1.55
BDNFP23560 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC5.35□□□□□ -1.55
BDNFP23560 AL354714.3-201ENST00000447284 493 ntBASIC5.35□□□□□ -1.55
BDNFP23560 TCEA1P1-201ENST00000449716 880 ntBASIC5.35□□□□□ -1.55
BDNFP23560 AL645939.1-201ENST00000453429 797 ntBASIC5.35□□□□□ -1.55
BDNFP23560 HIGD1AP8-201ENST00000453927 274 ntBASIC5.35□□□□□ -1.55
BDNFP23560 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC5.35□□□□□ -1.55
BDNFP23560 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC5.35□□□□□ -1.55
BDNFP23560 AC010374.1-201ENST00000503762 1237 ntBASIC5.35□□□□□ -1.55
BDNFP23560 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.35□□□□□ -1.55
BDNFP23560 AC008494.2-201ENST00000514544 370 ntBASIC5.35□□□□□ -1.55
BDNFP23560 HMGB1P23-201ENST00000518743 568 ntBASIC5.35□□□□□ -1.55
BDNFP23560 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC5.35□□□□□ -1.55
BDNFP23560 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC5.35□□□□□ -1.55
BDNFP23560 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC5.35□□□□□ -1.55
BDNFP23560 AC027369.5-201ENST00000533838 755 ntBASIC5.35□□□□□ -1.55
BDNFP23560 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC5.35□□□□□ -1.55
BDNFP23560 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC5.35□□□□□ -1.55
BDNFP23560 AL390726.5-202ENST00000564800 256 ntBASIC5.35□□□□□ -1.55
BDNFP23560 AC022884.2-201ENST00000578535 580 ntBASIC5.35□□□□□ -1.55
BDNFP23560 AP000919.1-202ENST00000581139 1264 ntBASIC5.35□□□□□ -1.55
BDNFP23560 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC5.35□□□□□ -1.55
BDNFP23560 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC5.35□□□□□ -1.55
BDNFP23560 AC026979.4-201ENST00000606555 645 ntBASIC5.35□□□□□ -1.55
BDNFP23560 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC5.35□□□□□ -1.55
BDNFP23560 AC245100.7-201ENST00000609678 442 ntBASIC5.35□□□□□ -1.55
BDNFP23560 AC105429.2-201ENST00000610567 517 ntBASIC5.35□□□□□ -1.55
BDNFP23560 Mico1.1-201ENST00000611698 204 ntBASIC5.35□□□□□ -1.55
BDNFP23560 AL035461.2-201ENST00000619201 524 ntBASIC5.35□□□□□ -1.55
BDNFP23560 AC067852.7-201ENST00000623270 535 ntBASIC5.35□□□□□ -1.55
BDNFP23560 AL356094.1-201ENST00000624663 1212 ntBASIC5.35□□□□□ -1.55
BDNFP23560 AP003400.6-201ENST00000624698 740 ntBASIC5.35□□□□□ -1.55
BDNFP23560 AL590396.2-201ENST00000636511 1041 ntBASIC5.35□□□□□ -1.55
BDNFP23560 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC5.35□□□□□ -1.55
BDNFP23560 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
BDNFP23560 AC005005.4-201ENST00000623789 16698 ntBASIC5.35□□□□□ -1.55
BDNFP23560 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
BDNFP23560 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.35□□□□□ -1.55
BDNFP23560 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
BDNFP23560 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
BDNFP23560 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
BDNFP23560 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
BDNFP23560 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.34□□□□□ -1.55
BDNFP23560 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
BDNFP23560 AC073429.2-201ENST00000569694 1444 ntBASIC5.34□□□□□ -1.55
BDNFP23560 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
BDNFP23560 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
BDNFP23560 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.34□□□□□ -1.55
BDNFP23560 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
BDNFP23560 AL035079.1-201ENST00000405210 287 ntBASIC5.34□□□□□ -1.55
BDNFP23560 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC5.34□□□□□ -1.55
BDNFP23560 RPL12P9-201ENST00000412942 488 ntBASIC5.34□□□□□ -1.55
BDNFP23560 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC5.34□□□□□ -1.55
BDNFP23560 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC5.34□□□□□ -1.55
BDNFP23560 CHEK2P3-201ENST00000416118 248 ntBASIC5.34□□□□□ -1.55
BDNFP23560 RPL7P4-203ENST00000430239 730 ntBASIC5.34□□□□□ -1.55
BDNFP23560 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC5.34□□□□□ -1.55
BDNFP23560 AC091180.1-201ENST00000462104 372 ntBASIC5.34□□□□□ -1.55
BDNFP23560 RPS20P21-201ENST00000466859 343 ntBASIC5.34□□□□□ -1.55
BDNFP23560 AC092905.1-201ENST00000467527 949 ntBASIC5.34□□□□□ -1.55
BDNFP23560 AC140172.1-201ENST00000502928 141 ntBASIC5.34□□□□□ -1.55
BDNFP23560 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC5.34□□□□□ -1.55
BDNFP23560 AC008628.1-201ENST00000508663 265 ntBASIC5.34□□□□□ -1.55
BDNFP23560 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC5.34□□□□□ -1.55
BDNFP23560 IGLVIV-66-1-201ENST00000521832 460 ntBASIC5.34□□□□□ -1.55
BDNFP23560 AP006245.2-201ENST00000522004 300 ntBASIC5.34□□□□□ -1.55
BDNFP23560 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.34□□□□□ -1.55
BDNFP23560 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC5.34□□□□□ -1.55
BDNFP23560 AL049830.4-201ENST00000555149 351 ntBASIC5.34□□□□□ -1.55
BDNFP23560 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC5.34□□□□□ -1.55
BDNFP23560 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC5.34□□□□□ -1.55
BDNFP23560 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC5.34□□□□□ -1.55
BDNFP23560 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC5.34□□□□□ -1.55
BDNFP23560 AC011487.3-201ENST00000593607 453 ntBASIC5.34□□□□□ -1.55
BDNFP23560 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC5.34□□□□□ -1.55
BDNFP23560 AC018926.3-201ENST00000618841 406 ntBASIC5.34□□□□□ -1.55
BDNFP23560 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC5.34□□□□□ -1.55
BDNFP23560 AC112694.2-201ENST00000623697 768 ntBASIC5.34□□□□□ -1.55
BDNFP23560 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC5.34□□□□□ -1.55
BDNFP23560 AC092608.3-201ENST00000625017 386 ntBASIC5.34□□□□□ -1.55
BDNFP23560 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC5.34□□□□□ -1.55
BDNFP23560 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.34□□□□□ -1.55
BDNFP23560 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.34□□□□□ -1.55
BDNFP23560 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
BDNFP23560 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
BDNFP23560 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.34□□□□□ -1.55
BDNFP23560 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 121.7 ms