Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
ERCC3P19447 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC6.95□□□□□ -1.3
ERCC3P19447 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
ERCC3P19447 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC6.95□□□□□ -1.3
ERCC3P19447 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
ERCC3P19447 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC6.95□□□□□ -1.3
ERCC3P19447 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC6.95□□□□□ -1.3
ERCC3P19447 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC6.95□□□□□ -1.3
ERCC3P19447 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC6.94□□□□□ -1.3
ERCC3P19447 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
ERCC3P19447 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
ERCC3P19447 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
ERCC3P19447 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
ERCC3P19447 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC6.94□□□□□ -1.3
ERCC3P19447 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC6.94□□□□□ -1.3
ERCC3P19447 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
ERCC3P19447 USP9YP4-201ENST00000424401 1745 ntBASIC6.94□□□□□ -1.3
ERCC3P19447 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
ERCC3P19447 RNU105B-201ENST00000364478 208 ntBASIC6.94□□□□□ -1.3
ERCC3P19447 FABP12P1-201ENST00000401911 322 ntBASIC6.94□□□□□ -1.3
ERCC3P19447 RNU2-28P-201ENST00000410457 189 ntBASIC6.94□□□□□ -1.3
ERCC3P19447 RN7SKP293-201ENST00000411389 296 ntBASIC6.94□□□□□ -1.3
ERCC3P19447 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC6.94□□□□□ -1.3
ERCC3P19447 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC6.94□□□□□ -1.3
ERCC3P19447 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC6.94□□□□□ -1.3
ERCC3P19447 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
ERCC3P19447 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC6.94□□□□□ -1.3
ERCC3P19447 AC007568.1-201ENST00000422912 471 ntBASIC6.94□□□□□ -1.3
ERCC3P19447 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC6.94□□□□□ -1.3
ERCC3P19447 OFD1P12Y-201ENST00000427963 1207 ntBASIC6.94□□□□□ -1.3
ERCC3P19447 B3GNT2P1-201ENST00000434960 952 ntBASIC6.94□□□□□ -1.3
ERCC3P19447 MTND4P6-201ENST00000438297 472 ntBASIC6.94□□□□□ -1.3
ERCC3P19447 AC241584.1-201ENST00000438469 1241 ntBASIC6.94□□□□□ -1.3
ERCC3P19447 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC6.94□□□□□ -1.3
ERCC3P19447 KRTAP8-2P-201ENST00000440620 186 ntBASIC6.94□□□□□ -1.3
ERCC3P19447 BMS1P10-201ENST00000443754 1120 ntBASIC6.94□□□□□ -1.3
ERCC3P19447 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC6.94□□□□□ -1.3
ERCC3P19447 RPS26P39-201ENST00000469206 341 ntBASIC6.94□□□□□ -1.3
ERCC3P19447 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
ERCC3P19447 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC6.94□□□□□ -1.3
ERCC3P19447 AC108078.3-201ENST00000502633 489 ntBASIC6.94□□□□□ -1.3
ERCC3P19447 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC6.94□□□□□ -1.3
ERCC3P19447 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC6.94□□□□□ -1.3
ERCC3P19447 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC6.94□□□□□ -1.3
ERCC3P19447 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC6.94□□□□□ -1.3
ERCC3P19447 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC6.94□□□□□ -1.3
ERCC3P19447 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC6.94□□□□□ -1.3
ERCC3P19447 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC6.94□□□□□ -1.3
ERCC3P19447 AGGF1P4-201ENST00000568249 801 ntBASIC6.94□□□□□ -1.3
ERCC3P19447 MIR3189-201ENST00000578735 73 ntBASIC6.94□□□□□ -1.3
ERCC3P19447 MIR3176-201ENST00000582210 90 ntBASIC6.94□□□□□ -1.3
ERCC3P19447 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC6.94□□□□□ -1.3
ERCC3P19447 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC6.94□□□□□ -1.3
ERCC3P19447 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC6.94□□□□□ -1.3
ERCC3P19447 AC106028.5-201ENST00000610332 395 ntBASIC6.94□□□□□ -1.3
ERCC3P19447 AC104073.3-201ENST00000610942 955 ntBASIC6.94□□□□□ -1.3
ERCC3P19447 AC008115.3-201ENST00000614874 549 ntBASIC6.94□□□□□ -1.3
ERCC3P19447 AC007204.2-201ENST00000615022 616 ntBASIC6.94□□□□□ -1.3
ERCC3P19447 CGA-206ENST00000630630 832 ntTSL 2 BASIC6.94□□□□□ -1.3
ERCC3P19447 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC6.94□□□□□ -1.3
ERCC3P19447 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC6.94□□□□□ -1.3
ERCC3P19447 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
ERCC3P19447 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC6.94□□□□□ -1.3
ERCC3P19447 SHQ1P1-201ENST00000437111 1544 ntBASIC6.94□□□□□ -1.3
ERCC3P19447 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
ERCC3P19447 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
ERCC3P19447 AC123769.1-201ENST00000530992 3192 ntBASIC6.94□□□□□ -1.3
ERCC3P19447 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
ERCC3P19447 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC6.94□□□□□ -1.3
ERCC3P19447 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
ERCC3P19447 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
ERCC3P19447 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
ERCC3P19447 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC6.93□□□□□ -1.3
ERCC3P19447 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
ERCC3P19447 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
ERCC3P19447 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
ERCC3P19447 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC6.93□□□□□ -1.3
ERCC3P19447 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC6.93□□□□□ -1.3
ERCC3P19447 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC6.93□□□□□ -1.3
ERCC3P19447 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC6.93□□□□□ -1.3
ERCC3P19447 AC093671.1-201ENST00000624981 2929 ntBASIC6.93□□□□□ -1.3
ERCC3P19447 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
ERCC3P19447 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC6.93□□□□□ -1.3
ERCC3P19447 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC6.93□□□□□ -1.3
ERCC3P19447 OR7E101P-201ENST00000400428 513 ntBASIC6.93□□□□□ -1.3
ERCC3P19447 PRRC2CP1-201ENST00000404428 159 ntBASIC6.93□□□□□ -1.3
ERCC3P19447 MTCO3P31-201ENST00000405526 789 ntBASIC6.93□□□□□ -1.3
ERCC3P19447 SNRPEP6-201ENST00000407465 277 ntBASIC6.93□□□□□ -1.3
ERCC3P19447 RPL6P29-201ENST00000414863 865 ntBASIC6.93□□□□□ -1.3
ERCC3P19447 AC092647.1-201ENST00000420654 287 ntBASIC6.93□□□□□ -1.3
ERCC3P19447 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC6.93□□□□□ -1.3
ERCC3P19447 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC6.93□□□□□ -1.3
ERCC3P19447 BX510359.3-201ENST00000422168 306 ntBASIC6.93□□□□□ -1.3
ERCC3P19447 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC6.93□□□□□ -1.3
ERCC3P19447 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC6.93□□□□□ -1.3
ERCC3P19447 GAPDHP48-201ENST00000436626 961 ntBASIC6.93□□□□□ -1.3
ERCC3P19447 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC6.93□□□□□ -1.3
ERCC3P19447 AC073594.1-201ENST00000462065 364 ntBASIC6.93□□□□□ -1.3
ERCC3P19447 F11-205ENST00000492972 1204 ntTSL 2 BASIC6.93□□□□□ -1.3
ERCC3P19447 AC027308.1-201ENST00000517993 110 ntBASIC6.93□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms