Protein–RNA interactions for Protein: P14543

NID1, Nidogen-1, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NID1P14543 RNU6-1148P-201ENST00000410992 104 ntBASIC6.3□□□□□ -1.4
NID1P14543 AC127391.1-201ENST00000411737 98 ntBASIC6.3□□□□□ -1.4
NID1P14543 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC6.3□□□□□ -1.4
NID1P14543 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
NID1P14543 AL713922.1-201ENST00000416477 747 ntBASIC6.3□□□□□ -1.4
NID1P14543 FAM183DP-201ENST00000421987 399 ntBASIC6.3□□□□□ -1.4
NID1P14543 AL158073.1-201ENST00000426848 1104 ntBASIC6.3□□□□□ -1.4
NID1P14543 FGF12-202ENST00000430714 603 ntTSL 2 BASIC6.3□□□□□ -1.4
NID1P14543 RPEP2-201ENST00000432149 701 ntBASIC6.3□□□□□ -1.4
NID1P14543 AL627308.1-201ENST00000435693 821 ntBASIC6.3□□□□□ -1.4
NID1P14543 MTND2P29-201ENST00000438595 412 ntBASIC6.3□□□□□ -1.4
NID1P14543 LSM1P1-201ENST00000438629 273 ntBASIC6.3□□□□□ -1.4
NID1P14543 PMS2P9-201ENST00000441237 515 ntBASIC6.3□□□□□ -1.4
NID1P14543 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC6.3□□□□□ -1.4
NID1P14543 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC6.3□□□□□ -1.4
NID1P14543 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC6.3□□□□□ -1.4
NID1P14543 MEMO1P4-201ENST00000453590 386 ntBASIC6.3□□□□□ -1.4
NID1P14543 RNU6-329P-201ENST00000459618 107 ntBASIC6.3□□□□□ -1.4
NID1P14543 HMGN2P26-201ENST00000463169 339 ntBASIC6.3□□□□□ -1.4
NID1P14543 MTND4P17-201ENST00000470444 350 ntBASIC6.3□□□□□ -1.4
NID1P14543 AC135999.1-201ENST00000478962 479 ntBASIC6.3□□□□□ -1.4
NID1P14543 AC012158.1-202ENST00000482431 1132 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
NID1P14543 AC013356.1-201ENST00000489027 564 ntBASIC6.3□□□□□ -1.4
NID1P14543 RN7SL187P-201ENST00000495587 303 ntBASIC6.3□□□□□ -1.4
NID1P14543 RN7SL143P-201ENST00000496780 297 ntBASIC6.3□□□□□ -1.4
NID1P14543 GAPDHP56-201ENST00000506031 988 ntBASIC6.3□□□□□ -1.4
NID1P14543 AC096754.1-201ENST00000508904 818 ntBASIC6.3□□□□□ -1.4
NID1P14543 PCBP2P3-201ENST00000509726 843 ntBASIC6.3□□□□□ -1.4
NID1P14543 AC097103.2-205ENST00000515247 567 ntTSL 4 BASIC6.3□□□□□ -1.4
NID1P14543 RNU4-49P-201ENST00000516080 140 ntBASIC6.3□□□□□ -1.4
NID1P14543 SNORA40.12-201ENST00000516329 111 ntBASIC6.3□□□□□ -1.4
NID1P14543 RNA5SP278-201ENST00000517055 102 ntBASIC6.3□□□□□ -1.4
NID1P14543 Y_RNA.718-201ENST00000517110 102 ntBASIC6.3□□□□□ -1.4
NID1P14543 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC6.3□□□□□ -1.4
NID1P14543 TPM3P3-201ENST00000521343 354 ntBASIC6.3□□□□□ -1.4
NID1P14543 IGHVIII-25-1-201ENST00000522143 241 ntBASIC6.3□□□□□ -1.4
NID1P14543 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC6.3□□□□□ -1.4
NID1P14543 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC6.3□□□□□ -1.4
NID1P14543 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC6.3□□□□□ -1.4
NID1P14543 AL035410.2-201ENST00000604963 864 ntBASIC6.3□□□□□ -1.4
NID1P14543 AL365434.2-201ENST00000607979 234 ntBASIC6.3□□□□□ -1.4
NID1P14543 Z98949.1-217ENST00000609275 994 ntTSL 5 BASIC6.3□□□□□ -1.4
NID1P14543 5S_rRNA.23-201ENST00000612086 102 ntBASIC6.3□□□□□ -1.4
NID1P14543 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC6.3□□□□□ -1.4
NID1P14543 AL133173.2-201ENST00000614270 90 ntBASIC6.3□□□□□ -1.4
NID1P14543 U4.1-201ENST00000620349 87 ntBASIC6.3□□□□□ -1.4
NID1P14543 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC6.3□□□□□ -1.4
NID1P14543 AC019270.1-201ENST00000523495 3488 ntTSL 5 BASIC6.3□□□□□ -1.4
NID1P14543 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
NID1P14543 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC6.3□□□□□ -1.4
NID1P14543 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
NID1P14543 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC6.3□□□□□ -1.4
NID1P14543 EPHA3-203ENST00000494014 3085 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
NID1P14543 AC241584.2-201ENST00000637142 2090 ntBASIC6.3□□□□□ -1.4
NID1P14543 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
NID1P14543 LINC01011-204ENST00000605901 1573 ntTSL 2 BASIC6.3□□□□□ -1.4
NID1P14543 NRP1-205ENST00000374823 3737 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
NID1P14543 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
NID1P14543 SPTA1-201ENST00000368147 7999 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
NID1P14543 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
NID1P14543 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
NID1P14543 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
NID1P14543 AC092447.10-201ENST00000620607 1652 ntBASIC6.3□□□□□ -1.4
NID1P14543 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
NID1P14543 AL391262.1-201ENST00000556558 1992 ntBASIC6.29□□□□□ -1.4
NID1P14543 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
NID1P14543 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
NID1P14543 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
NID1P14543 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC6.29□□□□□ -1.4
NID1P14543 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
NID1P14543 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC6.29□□□□□ -1.4
NID1P14543 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
NID1P14543 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
NID1P14543 CHRM5-202ENST00000557872 2687 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
NID1P14543 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC6.29□□□□□ -1.4
NID1P14543 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
NID1P14543 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC6.29□□□□□ -1.4
NID1P14543 GMFG-201ENST00000253054 616 ntTSL 5 BASIC6.29□□□□□ -1.4
NID1P14543 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC6.29□□□□□ -1.4
NID1P14543 USP1-202ENST00000371146 3507 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
NID1P14543 RNU6-98P-201ENST00000384173 107 ntBASIC6.29□□□□□ -1.4
NID1P14543 RNU6-456P-201ENST00000384493 107 ntBASIC6.29□□□□□ -1.4
NID1P14543 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
NID1P14543 TRAV27-201ENST00000390457 425 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
NID1P14543 AC245036.1-201ENST00000391727 309 ntBASIC6.29□□□□□ -1.4
NID1P14543 GGA1-205ENST00000405147 575 ntTSL 4 BASIC6.29□□□□□ -1.4
NID1P14543 AC019130.1-201ENST00000413841 391 ntTSL 2 BASIC6.29□□□□□ -1.4
NID1P14543 BX284668.3-201ENST00000414128 882 ntTSL 5 BASIC6.29□□□□□ -1.4
NID1P14543 NDUFB4P5-201ENST00000415445 361 ntBASIC6.29□□□□□ -1.4
NID1P14543 AC095038.1-201ENST00000429248 1591 ntBASIC6.29□□□□□ -1.4
NID1P14543 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC6.29□□□□□ -1.4
NID1P14543 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC6.29□□□□□ -1.4
NID1P14543 LINC00328-2P-201ENST00000436585 219 ntBASIC6.29□□□□□ -1.4
NID1P14543 FGF13-AS1-201ENST00000438238 849 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
NID1P14543 AC009948.1-203ENST00000450044 793 ntTSL 3 BASIC6.29□□□□□ -1.4
NID1P14543 AC022080.2-201ENST00000452932 533 ntBASIC6.29□□□□□ -1.4
NID1P14543 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC6.29□□□□□ -1.4
NID1P14543 BTF3P5-201ENST00000457252 467 ntBASIC6.29□□□□□ -1.4
NID1P14543 PPP1R2P5-201ENST00000457256 603 ntBASIC6.29□□□□□ -1.4
NID1P14543 AC099328.2-201ENST00000465347 455 ntTSL 3 BASIC6.29□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 132.3 ms