Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC5.8□□□□□ -1.48
COL6A2P12110 RPL35AP3-201ENST00000414680 288 ntBASIC5.8□□□□□ -1.48
COL6A2P12110 AL596448.1-201ENST00000415024 392 ntBASIC5.8□□□□□ -1.48
COL6A2P12110 TMSB4XP6-201ENST00000415187 135 ntBASIC5.8□□□□□ -1.48
COL6A2P12110 MTND1P23-201ENST00000416931 372 ntBASIC5.8□□□□□ -1.48
COL6A2P12110 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC5.8□□□□□ -1.48
COL6A2P12110 TMSB4XP1-201ENST00000424567 135 ntBASIC5.8□□□□□ -1.48
COL6A2P12110 VTI1BP4-201ENST00000427516 527 ntBASIC5.8□□□□□ -1.48
COL6A2P12110 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC5.8□□□□□ -1.48
COL6A2P12110 GCA-203ENST00000429691 824 ntTSL 3 BASIC5.8□□□□□ -1.48
COL6A2P12110 LINC00328-2P-201ENST00000436585 219 ntBASIC5.8□□□□□ -1.48
COL6A2P12110 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.8□□□□□ -1.48
COL6A2P12110 MTND2P20-201ENST00000440805 661 ntBASIC5.8□□□□□ -1.48
COL6A2P12110 AC092809.1-201ENST00000441469 474 ntBASIC5.8□□□□□ -1.48
COL6A2P12110 AC023271.1-201ENST00000445936 1090 ntBASIC5.8□□□□□ -1.48
COL6A2P12110 AL445466.1-201ENST00000448432 357 ntBASIC5.8□□□□□ -1.48
COL6A2P12110 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.8□□□□□ -1.48
COL6A2P12110 AC098818.1-201ENST00000478593 252 ntBASIC5.8□□□□□ -1.48
COL6A2P12110 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC5.8□□□□□ -1.48
COL6A2P12110 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC5.8□□□□□ -1.48
COL6A2P12110 ARL2BPP4-201ENST00000506854 471 ntBASIC5.8□□□□□ -1.48
COL6A2P12110 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.8□□□□□ -1.48
COL6A2P12110 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC5.8□□□□□ -1.48
COL6A2P12110 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.8□□□□□ -1.48
COL6A2P12110 RNA5SP135-201ENST00000517019 125 ntBASIC5.8□□□□□ -1.48
COL6A2P12110 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC5.8□□□□□ -1.48
COL6A2P12110 AP001207.1-201ENST00000524051 481 ntBASIC5.8□□□□□ -1.48
COL6A2P12110 FAU-203ENST00000525297 355 ntTSL 5 BASIC5.8□□□□□ -1.48
COL6A2P12110 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC5.8□□□□□ -1.48
COL6A2P12110 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC5.8□□□□□ -1.48
COL6A2P12110 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC5.8□□□□□ -1.48
COL6A2P12110 AGGF1P8-201ENST00000562979 1000 ntBASIC5.8□□□□□ -1.48
COL6A2P12110 AC090312.2-201ENST00000582687 378 ntBASIC5.8□□□□□ -1.48
COL6A2P12110 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.8□□□□□ -1.48
COL6A2P12110 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.8□□□□□ -1.48
COL6A2P12110 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC5.8□□□□□ -1.48
COL6A2P12110 AC021106.3-201ENST00000623925 531 ntBASIC5.8□□□□□ -1.48
COL6A2P12110 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC5.8□□□□□ -1.48
COL6A2P12110 TEX41-293ENST00000630451 690 ntTSL 5 BASIC5.8□□□□□ -1.48
COL6A2P12110 AC073488.3-201ENST00000631611 778 ntBASIC5.8□□□□□ -1.48
COL6A2P12110 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
COL6A2P12110 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
COL6A2P12110 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
COL6A2P12110 AC018809.2-201ENST00000602436 3823 ntBASIC5.8□□□□□ -1.48
COL6A2P12110 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
COL6A2P12110 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC5.8□□□□□ -1.48
COL6A2P12110 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
COL6A2P12110 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
COL6A2P12110 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
COL6A2P12110 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
COL6A2P12110 AC092447.7-201ENST00000422212 1621 ntBASIC5.79□□□□□ -1.48
COL6A2P12110 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
COL6A2P12110 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
COL6A2P12110 RNU5D-1-201ENST00000363299 116 ntBASIC5.79□□□□□ -1.48
COL6A2P12110 RNY3P10-201ENST00000384764 102 ntBASIC5.79□□□□□ -1.48
COL6A2P12110 RNU6-1320P-201ENST00000390838 107 ntBASIC5.79□□□□□ -1.48
COL6A2P12110 RNU6-1269P-201ENST00000391139 107 ntBASIC5.79□□□□□ -1.48
COL6A2P12110 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC5.79□□□□□ -1.48
COL6A2P12110 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
COL6A2P12110 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.79□□□□□ -1.48
COL6A2P12110 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC5.79□□□□□ -1.48
COL6A2P12110 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC5.79□□□□□ -1.48
COL6A2P12110 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC5.79□□□□□ -1.48
COL6A2P12110 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
COL6A2P12110 AC099670.2-201ENST00000435130 321 ntBASIC5.79□□□□□ -1.48
COL6A2P12110 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC5.79□□□□□ -1.48
COL6A2P12110 PPIAP17-201ENST00000438507 471 ntBASIC5.79□□□□□ -1.48
COL6A2P12110 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC5.79□□□□□ -1.48
COL6A2P12110 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.79□□□□□ -1.48
COL6A2P12110 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC5.79□□□□□ -1.48
COL6A2P12110 RBMY2TP-201ENST00000451162 947 ntBASIC5.79□□□□□ -1.48
COL6A2P12110 RPL23AP35-201ENST00000451906 501 ntBASIC5.79□□□□□ -1.48
COL6A2P12110 PPIAP7-201ENST00000454070 489 ntBASIC5.79□□□□□ -1.48
COL6A2P12110 RNU6-599P-201ENST00000459383 107 ntBASIC5.79□□□□□ -1.48
COL6A2P12110 RNU6-1193P-201ENST00000459461 107 ntBASIC5.79□□□□□ -1.48
COL6A2P12110 RPS7P7-201ENST00000463499 571 ntBASIC5.79□□□□□ -1.48
COL6A2P12110 AL117692.1-201ENST00000494283 713 ntBASIC5.79□□□□□ -1.48
COL6A2P12110 AC096751.1-202ENST00000502691 1067 ntBASIC5.79□□□□□ -1.48
COL6A2P12110 MTND2P33-201ENST00000506452 1031 ntBASIC5.79□□□□□ -1.48
COL6A2P12110 AC093281.2-201ENST00000510153 597 ntBASIC5.79□□□□□ -1.48
COL6A2P12110 AC006499.4-201ENST00000510947 694 ntBASIC5.79□□□□□ -1.48
COL6A2P12110 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC5.79□□□□□ -1.48
COL6A2P12110 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC5.79□□□□□ -1.48
COL6A2P12110 AP000620.1-201ENST00000527147 504 ntBASIC5.79□□□□□ -1.48
COL6A2P12110 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC5.79□□□□□ -1.48
COL6A2P12110 CCNG2P1-201ENST00000549521 1000 ntBASIC5.79□□□□□ -1.48
COL6A2P12110 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.79□□□□□ -1.48
COL6A2P12110 MT1CP-201ENST00000567054 174 ntBASIC5.79□□□□□ -1.48
COL6A2P12110 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC5.79□□□□□ -1.48
COL6A2P12110 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC5.79□□□□□ -1.48
COL6A2P12110 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC5.79□□□□□ -1.48
COL6A2P12110 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.79□□□□□ -1.48
COL6A2P12110 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.79□□□□□ -1.48
COL6A2P12110 AL139099.4-201ENST00000614802 114 ntBASIC5.79□□□□□ -1.48
COL6A2P12110 AC025588.4-201ENST00000615802 908 ntBASIC5.79□□□□□ -1.48
COL6A2P12110 U6.42-201ENST00000618440 107 ntBASIC5.79□□□□□ -1.48
COL6A2P12110 RNU6-368P-201ENST00000620928 107 ntBASIC5.79□□□□□ -1.48
COL6A2P12110 RNU6-538P-201ENST00000622329 107 ntBASIC5.79□□□□□ -1.48
COL6A2P12110 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC5.79□□□□□ -1.48
COL6A2P12110 AC025048.6-202ENST00000627667 438 ntBASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 10.3 ms