Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 AL121839.2-201ENST00000565058 6943 ntBASIC4.77□□□□□ -1.65
COL11A1P12107 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
COL11A1P12107 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
COL11A1P12107 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.77□□□□□ -1.65
COL11A1P12107 HSPD1P14-201ENST00000432666 1618 ntBASIC4.77□□□□□ -1.65
COL11A1P12107 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
COL11A1P12107 NCOA4P2-201ENST00000340589 1813 ntBASIC4.77□□□□□ -1.65
COL11A1P12107 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
COL11A1P12107 AC106871.1-201ENST00000568324 3102 ntBASIC4.77□□□□□ -1.65
COL11A1P12107 RALGAPA1P1-201ENST00000443361 6232 ntBASIC4.76□□□□□ -1.65
COL11A1P12107 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC4.76□□□□□ -1.65
COL11A1P12107 RN7SKP186-201ENST00000365371 303 ntBASIC4.76□□□□□ -1.65
COL11A1P12107 AL445584.1-201ENST00000431451 330 ntBASIC4.76□□□□□ -1.65
COL11A1P12107 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.76□□□□□ -1.65
COL11A1P12107 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC4.76□□□□□ -1.65
COL11A1P12107 AL358232.1-201ENST00000448030 501 ntBASIC4.76□□□□□ -1.65
COL11A1P12107 RPL23AP65-201ENST00000475608 468 ntBASIC4.76□□□□□ -1.65
COL11A1P12107 CYCSP28-201ENST00000534284 321 ntBASIC4.76□□□□□ -1.65
COL11A1P12107 DYNLL1P4-201ENST00000549314 266 ntBASIC4.76□□□□□ -1.65
COL11A1P12107 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC4.76□□□□□ -1.65
COL11A1P12107 AC027176.2-201ENST00000559166 746 ntBASIC4.76□□□□□ -1.65
COL11A1P12107 AC124068.1-201ENST00000563131 678 ntBASIC4.76□□□□□ -1.65
COL11A1P12107 HNRNPCP4-201ENST00000571636 900 ntBASIC4.76□□□□□ -1.65
COL11A1P12107 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC4.76□□□□□ -1.65
COL11A1P12107 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.76□□□□□ -1.65
COL11A1P12107 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
COL11A1P12107 PSMC6-218ENST00000606149 1560 ntAPPRIS ALT1 TSL 1 (best) BASIC4.76□□□□□ -1.65
COL11A1P12107 VPS35P1-201ENST00000563400 1518 ntBASIC4.76□□□□□ -1.65
COL11A1P12107 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.76□□□□□ -1.65
COL11A1P12107 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
COL11A1P12107 AL929601.4-201ENST00000613011 1341 ntBASIC4.76□□□□□ -1.65
COL11A1P12107 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
COL11A1P12107 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
COL11A1P12107 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
COL11A1P12107 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
COL11A1P12107 RNA5SP399-201ENST00000364003 117 ntBASIC4.76□□□□□ -1.65
COL11A1P12107 RPL23AP25-201ENST00000430973 463 ntBASIC4.76□□□□□ -1.65
COL11A1P12107 AL133547.1-201ENST00000448546 220 ntBASIC4.76□□□□□ -1.65
COL11A1P12107 AC112206.1-201ENST00000468416 477 ntBASIC4.76□□□□□ -1.65
COL11A1P12107 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC4.76□□□□□ -1.65
COL11A1P12107 MTND4LP31-201ENST00000514859 294 ntBASIC4.76□□□□□ -1.65
COL11A1P12107 RNA5SP497-201ENST00000516081 97 ntBASIC4.76□□□□□ -1.65
COL11A1P12107 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.76□□□□□ -1.65
COL11A1P12107 AC107982.3-201ENST00000584957 985 ntBASIC4.76□□□□□ -1.65
COL11A1P12107 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC4.76□□□□□ -1.65
COL11A1P12107 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC4.76□□□□□ -1.65
COL11A1P12107 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
COL11A1P12107 AC015922.4-201ENST00000612568 690 ntBASIC4.76□□□□□ -1.65
COL11A1P12107 AL121772.2-201ENST00000614331 297 ntBASIC4.76□□□□□ -1.65
COL11A1P12107 AL356121.2-201ENST00000624715 780 ntBASIC4.76□□□□□ -1.65
COL11A1P12107 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.76□□□□□ -1.65
COL11A1P12107 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
COL11A1P12107 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC4.76□□□□□ -1.65
COL11A1P12107 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.75□□□□□ -1.65
COL11A1P12107 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
COL11A1P12107 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.75□□□□□ -1.65
COL11A1P12107 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.75□□□□□ -1.65
COL11A1P12107 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
COL11A1P12107 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.75□□□□□ -1.65
COL11A1P12107 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.75□□□□□ -1.65
COL11A1P12107 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC4.75□□□□□ -1.65
COL11A1P12107 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.75□□□□□ -1.65
COL11A1P12107 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.75□□□□□ -1.65
COL11A1P12107 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
COL11A1P12107 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
COL11A1P12107 RPL7P2-201ENST00000427639 268 ntBASIC4.75□□□□□ -1.65
COL11A1P12107 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC4.75□□□□□ -1.65
COL11A1P12107 AC146944.2-203ENST00000502493 354 ntBASIC4.75□□□□□ -1.65
COL11A1P12107 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.75□□□□□ -1.65
COL11A1P12107 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
COL11A1P12107 AC139495.1-202ENST00000513164 354 ntBASIC4.75□□□□□ -1.65
COL11A1P12107 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
COL11A1P12107 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC4.75□□□□□ -1.65
COL11A1P12107 AC006064.5-201ENST00000541782 248 ntBASIC4.75□□□□□ -1.65
COL11A1P12107 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC4.75□□□□□ -1.65
COL11A1P12107 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC4.75□□□□□ -1.65
COL11A1P12107 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC4.75□□□□□ -1.65
COL11A1P12107 MIR3936-201ENST00000584304 110 ntBASIC4.75□□□□□ -1.65
COL11A1P12107 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC4.75□□□□□ -1.65
COL11A1P12107 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
COL11A1P12107 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
COL11A1P12107 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
COL11A1P12107 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
COL11A1P12107 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
COL11A1P12107 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
COL11A1P12107 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.75□□□□□ -1.65
COL11A1P12107 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
COL11A1P12107 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
COL11A1P12107 AC067945.1-201ENST00000342609 618 ntBASIC4.74□□□□□ -1.65
COL11A1P12107 SNORD66.1-201ENST00000391230 76 ntBASIC4.74□□□□□ -1.65
COL11A1P12107 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
COL11A1P12107 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC4.74□□□□□ -1.65
COL11A1P12107 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.74□□□□□ -1.65
COL11A1P12107 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC4.74□□□□□ -1.65
COL11A1P12107 AL445433.1-201ENST00000457507 257 ntBASIC4.74□□□□□ -1.65
COL11A1P12107 RPS4XP15-201ENST00000489210 795 ntBASIC4.74□□□□□ -1.65
COL11A1P12107 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.74□□□□□ -1.65
COL11A1P12107 AC005086.4-201ENST00000623065 213 ntBASIC4.74□□□□□ -1.65
COL11A1P12107 AC004777.1-201ENST00000624317 287 ntBASIC4.74□□□□□ -1.65
COL11A1P12107 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 165.3 ms