Protein–RNA interactions for Protein: P11230

CHRNB1, Acetylcholine receptor subunit beta, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1P11230 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
CHRNB1P11230 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.58
CHRNB1P11230 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.15□□□□□ -1.58
CHRNB1P11230 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
CHRNB1P11230 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.15□□□□□ -1.58
CHRNB1P11230 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
CHRNB1P11230 MTCO1P15-201ENST00000529569 1526 ntBASIC5.15□□□□□ -1.58
CHRNB1P11230 RPL32P3-201ENST00000359025 275 ntBASIC5.15□□□□□ -1.59
CHRNB1P11230 AC068538.1-201ENST00000376856 336 ntBASIC5.15□□□□□ -1.59
CHRNB1P11230 RNA5SP332-201ENST00000391063 115 ntBASIC5.15□□□□□ -1.59
CHRNB1P11230 U3.28-201ENST00000391249 210 ntBASIC5.15□□□□□ -1.59
CHRNB1P11230 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
CHRNB1P11230 RN7SKP247-201ENST00000411094 308 ntBASIC5.15□□□□□ -1.59
CHRNB1P11230 RN7SKP100-201ENST00000411258 284 ntBASIC5.15□□□□□ -1.59
CHRNB1P11230 AL356968.2-201ENST00000412769 1257 ntBASIC5.15□□□□□ -1.59
CHRNB1P11230 AC107081.1-201ENST00000414975 361 ntBASIC5.15□□□□□ -1.59
CHRNB1P11230 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC5.15□□□□□ -1.59
CHRNB1P11230 AC009480.2-201ENST00000422916 432 ntBASIC5.15□□□□□ -1.59
CHRNB1P11230 RPL12P28-201ENST00000430852 489 ntBASIC5.15□□□□□ -1.59
CHRNB1P11230 NDUFB4P8-201ENST00000435351 367 ntBASIC5.15□□□□□ -1.59
CHRNB1P11230 AL354714.3-201ENST00000447284 493 ntBASIC5.15□□□□□ -1.59
CHRNB1P11230 NOP56P2-201ENST00000447491 769 ntBASIC5.15□□□□□ -1.59
CHRNB1P11230 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC5.15□□□□□ -1.59
CHRNB1P11230 RPS23P7-201ENST00000466210 444 ntBASIC5.15□□□□□ -1.59
CHRNB1P11230 RN7SL189P-201ENST00000468631 289 ntBASIC5.15□□□□□ -1.59
CHRNB1P11230 RPL7P41-201ENST00000485823 957 ntBASIC5.15□□□□□ -1.59
CHRNB1P11230 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC5.15□□□□□ -1.59
CHRNB1P11230 AC010350.1-201ENST00000504908 231 ntBASIC5.15□□□□□ -1.59
CHRNB1P11230 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC5.15□□□□□ -1.59
CHRNB1P11230 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC5.15□□□□□ -1.59
CHRNB1P11230 RNU6-311P-201ENST00000516224 102 ntBASIC5.15□□□□□ -1.59
CHRNB1P11230 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC5.15□□□□□ -1.59
CHRNB1P11230 AC022360.1-201ENST00000521058 340 ntBASIC5.15□□□□□ -1.59
CHRNB1P11230 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC5.15□□□□□ -1.59
CHRNB1P11230 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC5.15□□□□□ -1.59
CHRNB1P11230 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC5.15□□□□□ -1.59
CHRNB1P11230 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC5.15□□□□□ -1.59
CHRNB1P11230 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CHRNB1P11230 AC079064.1-201ENST00000528365 362 ntBASIC5.15□□□□□ -1.59
CHRNB1P11230 MRPS36P5-201ENST00000551909 298 ntBASIC5.15□□□□□ -1.59
CHRNB1P11230 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC5.15□□□□□ -1.59
CHRNB1P11230 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC5.15□□□□□ -1.59
CHRNB1P11230 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC5.15□□□□□ -1.59
CHRNB1P11230 UBA2-208ENST00000592791 910 ntTSL 2 BASIC5.15□□□□□ -1.59
CHRNB1P11230 NIFKP6-201ENST00000598115 845 ntBASIC5.15□□□□□ -1.59
CHRNB1P11230 RPL26P30-202ENST00000602923 645 ntBASIC5.15□□□□□ -1.59
CHRNB1P11230 AL512782.1-201ENST00000603093 364 ntBASIC5.15□□□□□ -1.59
CHRNB1P11230 AC114878.2-201ENST00000604863 1251 ntBASIC5.15□□□□□ -1.59
CHRNB1P11230 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.15□□□□□ -1.59
CHRNB1P11230 AL451049.1-201ENST00000608672 497 ntBASIC5.15□□□□□ -1.59
CHRNB1P11230 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC5.15□□□□□ -1.59
CHRNB1P11230 AC016717.3-201ENST00000624730 554 ntBASIC5.15□□□□□ -1.59
CHRNB1P11230 AC017104.5-201ENST00000637647 639 ntBASIC5.15□□□□□ -1.59
CHRNB1P11230 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
CHRNB1P11230 ZNF652P1-201ENST00000442420 1309 ntBASIC5.15□□□□□ -1.59
CHRNB1P11230 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CHRNB1P11230 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CHRNB1P11230 CA1-225ENST00000626824 2405 ntTSL 5 BASIC5.15□□□□□ -1.59
CHRNB1P11230 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CHRNB1P11230 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.15□□□□□ -1.59
CHRNB1P11230 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CHRNB1P11230 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.15□□□□□ -1.59
CHRNB1P11230 Z98755.1-201ENST00000407015 1384 ntBASIC5.15□□□□□ -1.59
CHRNB1P11230 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CHRNB1P11230 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
CHRNB1P11230 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CHRNB1P11230 API5-210ENST00000534600 1760 ntTSL 5 BASIC5.14□□□□□ -1.59
CHRNB1P11230 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.14□□□□□ -1.59
CHRNB1P11230 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.14□□□□□ -1.59
CHRNB1P11230 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CHRNB1P11230 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CHRNB1P11230 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CHRNB1P11230 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.14□□□□□ -1.59
CHRNB1P11230 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.14□□□□□ -1.59
CHRNB1P11230 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CHRNB1P11230 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
CHRNB1P11230 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
CHRNB1P11230 SAMMSON-226ENST00000642089 1582 ntBASIC5.14□□□□□ -1.59
CHRNB1P11230 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
CHRNB1P11230 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CHRNB1P11230 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CHRNB1P11230 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC5.14□□□□□ -1.59
CHRNB1P11230 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC5.14□□□□□ -1.59
CHRNB1P11230 AL021331.1-201ENST00000402817 582 ntBASIC5.14□□□□□ -1.59
CHRNB1P11230 CBX1P3-201ENST00000413296 527 ntBASIC5.14□□□□□ -1.59
CHRNB1P11230 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC5.14□□□□□ -1.59
CHRNB1P11230 SLC4A1APP1-201ENST00000419995 602 ntBASIC5.14□□□□□ -1.59
CHRNB1P11230 AC069213.2-201ENST00000420238 366 ntBASIC5.14□□□□□ -1.59
CHRNB1P11230 AC005005.2-201ENST00000420779 380 ntBASIC5.14□□□□□ -1.59
CHRNB1P11230 BX323845.1-201ENST00000432417 179 ntBASIC5.14□□□□□ -1.59
CHRNB1P11230 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CHRNB1P11230 AL591719.1-201ENST00000444669 744 ntBASIC5.14□□□□□ -1.59
CHRNB1P11230 IGHV5-78-201ENST00000450948 295 ntBASIC5.14□□□□□ -1.59
CHRNB1P11230 snoU13.1-201ENST00000459157 104 ntBASIC5.14□□□□□ -1.59
CHRNB1P11230 AC096992.1-201ENST00000459808 709 ntBASIC5.14□□□□□ -1.59
CHRNB1P11230 SSR3-206ENST00000476217 807 ntTSL 3 BASIC5.14□□□□□ -1.59
CHRNB1P11230 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC5.14□□□□□ -1.59
CHRNB1P11230 AC022133.1-201ENST00000490961 571 ntBASIC5.14□□□□□ -1.59
CHRNB1P11230 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC5.14□□□□□ -1.59
CHRNB1P11230 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms