Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 OR11H4-201ENST00000315409 1082 ntBASIC3.34□□□□□ -1.87
CXCL1P09341 AC011155.1-201ENST00000316512 456 ntBASIC3.34□□□□□ -1.87
CXCL1P09341 RNU1-18P-201ENST00000363062 164 ntBASIC3.34□□□□□ -1.87
CXCL1P09341 RPL35AP24-201ENST00000413846 330 ntBASIC3.34□□□□□ -1.87
CXCL1P09341 CHEK2P3-201ENST00000416118 248 ntBASIC3.34□□□□□ -1.87
CXCL1P09341 DNAJA1P1-201ENST00000425106 1187 ntBASIC3.34□□□□□ -1.87
CXCL1P09341 AC007559.1-201ENST00000428736 355 ntBASIC3.34□□□□□ -1.87
CXCL1P09341 IFNNP1-201ENST00000429219 553 ntBASIC3.34□□□□□ -1.87
CXCL1P09341 AC087650.1-201ENST00000431445 468 ntBASIC3.34□□□□□ -1.87
CXCL1P09341 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC3.34□□□□□ -1.87
CXCL1P09341 AC097523.2-201ENST00000435551 652 ntBASIC3.34□□□□□ -1.87
CXCL1P09341 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC3.34□□□□□ -1.87
CXCL1P09341 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC3.34□□□□□ -1.87
CXCL1P09341 AC079841.1-201ENST00000481228 950 ntBASIC3.34□□□□□ -1.87
CXCL1P09341 AC072052.1-201ENST00000496556 306 ntBASIC3.34□□□□□ -1.87
CXCL1P09341 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC3.34□□□□□ -1.87
CXCL1P09341 KCTD9P2-201ENST00000512203 1013 ntBASIC3.34□□□□□ -1.87
CXCL1P09341 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC3.34□□□□□ -1.87
CXCL1P09341 AC013701.1-201ENST00000522657 465 ntBASIC3.34□□□□□ -1.87
CXCL1P09341 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.34□□□□□ -1.87
CXCL1P09341 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CXCL1P09341 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC3.34□□□□□ -1.87
CXCL1P09341 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC3.34□□□□□ -1.87
CXCL1P09341 AC105129.1-201ENST00000560250 297 ntBASIC3.34□□□□□ -1.87
CXCL1P09341 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC3.34□□□□□ -1.87
CXCL1P09341 RN7SL652P-201ENST00000577769 300 ntBASIC3.34□□□□□ -1.87
CXCL1P09341 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
CXCL1P09341 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC3.34□□□□□ -1.87
CXCL1P09341 AC009163.6-201ENST00000612367 342 ntBASIC3.34□□□□□ -1.87
CXCL1P09341 AC095038.2-201ENST00000621464 1070 ntBASIC3.34□□□□□ -1.87
CXCL1P09341 AC112694.2-201ENST00000623697 768 ntBASIC3.34□□□□□ -1.87
CXCL1P09341 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC3.34□□□□□ -1.87
CXCL1P09341 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
CXCL1P09341 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
CXCL1P09341 AC233968.1-201ENST00000611212 1300 ntBASIC3.34□□□□□ -1.87
CXCL1P09341 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC3.34□□□□□ -1.88
CXCL1P09341 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC3.34□□□□□ -1.88
CXCL1P09341 AC106871.1-201ENST00000568324 3102 ntBASIC3.34□□□□□ -1.88
CXCL1P09341 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.34□□□□□ -1.88
CXCL1P09341 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
CXCL1P09341 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
CXCL1P09341 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.88
CXCL1P09341 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CXCL1P09341 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
CXCL1P09341 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CXCL1P09341 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CXCL1P09341 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CXCL1P09341 AC107977.1-201ENST00000355745 939 ntBASIC3.33□□□□□ -1.88
CXCL1P09341 MIR365B-201ENST00000362317 111 ntBASIC3.33□□□□□ -1.88
CXCL1P09341 RNA5SP242-201ENST00000364171 118 ntBASIC3.33□□□□□ -1.88
CXCL1P09341 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CXCL1P09341 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
CXCL1P09341 MAST4-207ENST00000407621 559 ntTSL 2 BASIC3.33□□□□□ -1.88
CXCL1P09341 RNU2-50P-201ENST00000410494 143 ntBASIC3.33□□□□□ -1.88
CXCL1P09341 AP000534.2-201ENST00000412729 568 ntBASIC3.33□□□□□ -1.88
CXCL1P09341 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC3.33□□□□□ -1.88
CXCL1P09341 AC140479.3-201ENST00000418944 1126 ntBASIC3.33□□□□□ -1.88
CXCL1P09341 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC3.33□□□□□ -1.88
CXCL1P09341 CNOT7P2-201ENST00000441051 832 ntBASIC3.33□□□□□ -1.88
CXCL1P09341 AC108463.1-201ENST00000450258 347 ntBASIC3.33□□□□□ -1.88
CXCL1P09341 RN7SL93P-201ENST00000463035 293 ntBASIC3.33□□□□□ -1.88
CXCL1P09341 RN7SL741P-201ENST00000482473 289 ntBASIC3.33□□□□□ -1.88
CXCL1P09341 RN7SL30P-201ENST00000488416 306 ntBASIC3.33□□□□□ -1.88
CXCL1P09341 AC109462.1-201ENST00000491087 368 ntBASIC3.33□□□□□ -1.88
CXCL1P09341 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC3.33□□□□□ -1.88
CXCL1P09341 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC3.33□□□□□ -1.88
CXCL1P09341 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.33□□□□□ -1.88
CXCL1P09341 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC3.33□□□□□ -1.88
CXCL1P09341 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.33□□□□□ -1.88
CXCL1P09341 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC3.33□□□□□ -1.88
CXCL1P09341 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC3.33□□□□□ -1.88
CXCL1P09341 AL109741.3-201ENST00000561748 592 ntBASIC3.33□□□□□ -1.88
CXCL1P09341 AC006116.3-201ENST00000592968 361 ntBASIC3.33□□□□□ -1.88
CXCL1P09341 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.33□□□□□ -1.88
CXCL1P09341 AP003392.5-201ENST00000607857 415 ntBASIC3.33□□□□□ -1.88
CXCL1P09341 AL391261.4-201ENST00000616012 481 ntBASIC3.33□□□□□ -1.88
CXCL1P09341 MIR6778-201ENST00000617912 73 ntBASIC3.33□□□□□ -1.88
CXCL1P09341 TEX41-256ENST00000626411 368 ntTSL 5 BASIC3.33□□□□□ -1.88
CXCL1P09341 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC3.33□□□□□ -1.88
CXCL1P09341 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.33□□□□□ -1.88
CXCL1P09341 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC3.33□□□□□ -1.88
CXCL1P09341 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CXCL1P09341 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CXCL1P09341 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.33□□□□□ -1.88
CXCL1P09341 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.33□□□□□ -1.88
CXCL1P09341 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.33□□□□□ -1.88
CXCL1P09341 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC3.33□□□□□ -1.88
CXCL1P09341 PABPC1P6-201ENST00000445594 1829 ntBASIC3.33□□□□□ -1.88
CXCL1P09341 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC3.33□□□□□ -1.88
CXCL1P09341 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC3.33□□□□□ -1.88
CXCL1P09341 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CXCL1P09341 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CXCL1P09341 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CXCL1P09341 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
CXCL1P09341 RN7SKP95-201ENST00000362860 303 ntBASIC3.32□□□□□ -1.88
CXCL1P09341 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
CXCL1P09341 SNORA37-201ENST00000384504 129 ntBASIC3.32□□□□□ -1.88
CXCL1P09341 SNORD66.1-201ENST00000391230 76 ntBASIC3.32□□□□□ -1.88
CXCL1P09341 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CXCL1P09341 RPL30P2-201ENST00000414021 291 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 131.8 ms