Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 AL355433.1-201ENST00000422804 300 ntBASIC4.36□□□□□ -1.71
MT-ND1P03886 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC4.36□□□□□ -1.71
MT-ND1P03886 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC4.36□□□□□ -1.71
MT-ND1P03886 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC4.36□□□□□ -1.71
MT-ND1P03886 RPL7P11-201ENST00000437586 658 ntBASIC4.36□□□□□ -1.71
MT-ND1P03886 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC4.36□□□□□ -1.71
MT-ND1P03886 AC074367.1-201ENST00000438685 1125 ntBASIC4.36□□□□□ -1.71
MT-ND1P03886 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.36□□□□□ -1.71
MT-ND1P03886 ZNF736P1Y-201ENST00000440402 1276 ntBASIC4.36□□□□□ -1.71
MT-ND1P03886 XKRY2-201ENST00000442362 1093 ntBASIC4.36□□□□□ -1.71
MT-ND1P03886 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC4.36□□□□□ -1.71
MT-ND1P03886 SLC25A18P1-201ENST00000449385 454 ntBASIC4.36□□□□□ -1.71
MT-ND1P03886 HMGB1P26-201ENST00000452520 628 ntBASIC4.36□□□□□ -1.71
MT-ND1P03886 AC016724.1-201ENST00000453215 421 ntBASIC4.36□□□□□ -1.71
MT-ND1P03886 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.36□□□□□ -1.71
MT-ND1P03886 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC4.36□□□□□ -1.71
MT-ND1P03886 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC4.36□□□□□ -1.71
MT-ND1P03886 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC4.36□□□□□ -1.71
MT-ND1P03886 SUMO1P1-201ENST00000497904 306 ntBASIC4.36□□□□□ -1.71
MT-ND1P03886 PGBD4P4-201ENST00000509673 613 ntBASIC4.36□□□□□ -1.71
MT-ND1P03886 AC025768.1-201ENST00000510057 267 ntBASIC4.36□□□□□ -1.71
MT-ND1P03886 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC4.36□□□□□ -1.71
MT-ND1P03886 RNA5SP92-201ENST00000516437 110 ntBASIC4.36□□□□□ -1.71
MT-ND1P03886 RN7SKP147-201ENST00000517154 244 ntBASIC4.36□□□□□ -1.71
MT-ND1P03886 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.36□□□□□ -1.71
MT-ND1P03886 AC013701.1-201ENST00000522657 465 ntBASIC4.36□□□□□ -1.71
MT-ND1P03886 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
MT-ND1P03886 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.36□□□□□ -1.71
MT-ND1P03886 HAUS8P1-201ENST00000549005 542 ntBASIC4.36□□□□□ -1.71
MT-ND1P03886 AL136520.1-202ENST00000555494 763 ntBASIC4.36□□□□□ -1.71
MT-ND1P03886 GLRXP2-201ENST00000555594 321 ntBASIC4.36□□□□□ -1.71
MT-ND1P03886 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC4.36□□□□□ -1.71
MT-ND1P03886 AC073137.1-201ENST00000605636 634 ntBASIC4.36□□□□□ -1.71
MT-ND1P03886 AL158211.2-201ENST00000607282 395 ntBASIC4.36□□□□□ -1.71
MT-ND1P03886 AL121612.2-201ENST00000612261 482 ntBASIC4.36□□□□□ -1.71
MT-ND1P03886 EIF3FP1-201ENST00000613970 806 ntBASIC4.36□□□□□ -1.71
MT-ND1P03886 AL353726.1-201ENST00000614041 1000 ntBASIC4.36□□□□□ -1.71
MT-ND1P03886 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
MT-ND1P03886 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
MT-ND1P03886 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC4.36□□□□□ -1.71
MT-ND1P03886 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.36□□□□□ -1.71
MT-ND1P03886 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
MT-ND1P03886 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
MT-ND1P03886 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
MT-ND1P03886 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
MT-ND1P03886 OR51H2P-202ENST00000641424 3046 ntBASIC4.36□□□□□ -1.71
MT-ND1P03886 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
MT-ND1P03886 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
MT-ND1P03886 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.36□□□□□ -1.71
MT-ND1P03886 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC4.36□□□□□ -1.71
MT-ND1P03886 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
MT-ND1P03886 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
MT-ND1P03886 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
MT-ND1P03886 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.36□□□□□ -1.71
MT-ND1P03886 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC4.36□□□□□ -1.71
MT-ND1P03886 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
MT-ND1P03886 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.35□□□□□ -1.71
MT-ND1P03886 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
MT-ND1P03886 AC093311.1-201ENST00000506586 2021 ntBASIC4.35□□□□□ -1.71
MT-ND1P03886 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.35□□□□□ -1.71
MT-ND1P03886 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
MT-ND1P03886 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.35□□□□□ -1.71
MT-ND1P03886 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
MT-ND1P03886 RNA5SP28-201ENST00000363841 119 ntBASIC4.35□□□□□ -1.71
MT-ND1P03886 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.35□□□□□ -1.71
MT-ND1P03886 RNU6ATAC7P-201ENST00000408111 127 ntBASIC4.35□□□□□ -1.71
MT-ND1P03886 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC4.35□□□□□ -1.71
MT-ND1P03886 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.35□□□□□ -1.71
MT-ND1P03886 GTF2IP2-201ENST00000424290 697 ntBASIC4.35□□□□□ -1.71
MT-ND1P03886 AC009965.2-201ENST00000425328 970 ntBASIC4.35□□□□□ -1.71
MT-ND1P03886 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC4.35□□□□□ -1.71
MT-ND1P03886 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC4.35□□□□□ -1.71
MT-ND1P03886 ZNF736P11Y-201ENST00000442535 1213 ntBASIC4.35□□□□□ -1.71
MT-ND1P03886 AC092647.3-201ENST00000443044 633 ntBASIC4.35□□□□□ -1.71
MT-ND1P03886 ZNF736P12Y-201ENST00000443152 1243 ntBASIC4.35□□□□□ -1.71
MT-ND1P03886 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC4.35□□□□□ -1.71
MT-ND1P03886 PPIAP20-201ENST00000449839 135 ntBASIC4.35□□□□□ -1.71
MT-ND1P03886 AC010733.1-201ENST00000451515 401 ntBASIC4.35□□□□□ -1.71
MT-ND1P03886 ZNF736P4Y-201ENST00000454995 1243 ntBASIC4.35□□□□□ -1.71
MT-ND1P03886 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
MT-ND1P03886 RPL7P48-201ENST00000461513 746 ntBASIC4.35□□□□□ -1.71
MT-ND1P03886 AC092691.2-201ENST00000461787 803 ntBASIC4.35□□□□□ -1.71
MT-ND1P03886 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC4.35□□□□□ -1.71
MT-ND1P03886 AC117394.1-201ENST00000477323 567 ntBASIC4.35□□□□□ -1.71
MT-ND1P03886 AC091868.1-201ENST00000508746 304 ntBASIC4.35□□□□□ -1.71
MT-ND1P03886 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.35□□□□□ -1.71
MT-ND1P03886 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.35□□□□□ -1.71
MT-ND1P03886 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC4.35□□□□□ -1.71
MT-ND1P03886 SCARNA21.2-201ENST00000516600 166 ntBASIC4.35□□□□□ -1.71
MT-ND1P03886 RGS5-219ENST00000528019 512 ntTSL 4 BASIC4.35□□□□□ -1.71
MT-ND1P03886 AC100770.1-201ENST00000532310 322 ntBASIC4.35□□□□□ -1.71
MT-ND1P03886 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC4.35□□□□□ -1.71
MT-ND1P03886 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC4.35□□□□□ -1.71
MT-ND1P03886 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC4.35□□□□□ -1.71
MT-ND1P03886 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.35□□□□□ -1.71
MT-ND1P03886 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC4.35□□□□□ -1.71
MT-ND1P03886 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC4.35□□□□□ -1.71
MT-ND1P03886 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC4.35□□□□□ -1.71
MT-ND1P03886 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC4.35□□□□□ -1.71
MT-ND1P03886 MIR3691-201ENST00000578066 90 ntBASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms