Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC5.02□□□□□ -1.61
COL4A1P02462 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC5.02□□□□□ -1.61
COL4A1P02462 AC019278.1-201ENST00000623516 479 ntBASIC5.02□□□□□ -1.61
COL4A1P02462 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
COL4A1P02462 AC093591.2-201ENST00000565254 3843 ntBASIC5.01□□□□□ -1.61
COL4A1P02462 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC5.01□□□□□ -1.61
COL4A1P02462 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
COL4A1P02462 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC5.01□□□□□ -1.61
COL4A1P02462 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.01□□□□□ -1.61
COL4A1P02462 AL929601.4-201ENST00000613011 1341 ntBASIC5.01□□□□□ -1.61
COL4A1P02462 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
COL4A1P02462 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
COL4A1P02462 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC5.01□□□□□ -1.61
COL4A1P02462 AC068533.1-201ENST00000418542 415 ntBASIC5.01□□□□□ -1.61
COL4A1P02462 EIF1P3-201ENST00000423841 334 ntBASIC5.01□□□□□ -1.61
COL4A1P02462 PRELID3BP10-201ENST00000431957 584 ntBASIC5.01□□□□□ -1.61
COL4A1P02462 AL035246.1-201ENST00000433554 1255 ntBASIC5.01□□□□□ -1.61
COL4A1P02462 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC5.01□□□□□ -1.61
COL4A1P02462 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC5.01□□□□□ -1.61
COL4A1P02462 FCF1P7-201ENST00000451185 558 ntBASIC5.01□□□□□ -1.61
COL4A1P02462 GAPDHP36-201ENST00000480688 918 ntBASIC5.01□□□□□ -1.61
COL4A1P02462 NPM1P28-201ENST00000492269 840 ntBASIC5.01□□□□□ -1.61
COL4A1P02462 AC138938.1-201ENST00000515431 782 ntBASIC5.01□□□□□ -1.61
COL4A1P02462 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC5.01□□□□□ -1.61
COL4A1P02462 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC5.01□□□□□ -1.61
COL4A1P02462 DPPA3P2-201ENST00000553589 478 ntBASIC5.01□□□□□ -1.61
COL4A1P02462 AC011462.3-201ENST00000598988 540 ntTSL 3 BASIC5.01□□□□□ -1.61
COL4A1P02462 AL161756.2-201ENST00000604597 246 ntBASIC5.01□□□□□ -1.61
COL4A1P02462 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC5.01□□□□□ -1.61
COL4A1P02462 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
COL4A1P02462 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
COL4A1P02462 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.01□□□□□ -1.61
COL4A1P02462 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC5.01□□□□□ -1.61
COL4A1P02462 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
COL4A1P02462 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5□□□□□ -1.61
COL4A1P02462 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
COL4A1P02462 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC5□□□□□ -1.61
COL4A1P02462 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC5□□□□□ -1.61
COL4A1P02462 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
COL4A1P02462 PMCHL2-202ENST00000450213 1917 ntTSL 1 (best) BASIC5□□□□□ -1.61
COL4A1P02462 SNORA62.3-201ENST00000365110 153 ntBASIC5□□□□□ -1.61
COL4A1P02462 RNU6-761P-201ENST00000384148 107 ntBASIC5□□□□□ -1.61
COL4A1P02462 TCEA1P4-201ENST00000415066 844 ntBASIC5□□□□□ -1.61
COL4A1P02462 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC5□□□□□ -1.61
COL4A1P02462 EIF2S2P5-201ENST00000457635 968 ntBASIC5□□□□□ -1.61
COL4A1P02462 IGLV3-26-201ENST00000520756 302 ntBASIC5□□□□□ -1.61
COL4A1P02462 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC5□□□□□ -1.61
COL4A1P02462 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC5□□□□□ -1.61
COL4A1P02462 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC5□□□□□ -1.61
COL4A1P02462 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC5□□□□□ -1.61
COL4A1P02462 PACRG-211ENST00000621363 360 ntTSL 5 BASIC5□□□□□ -1.61
COL4A1P02462 AC140113.4-201ENST00000622087 222 ntBASIC5□□□□□ -1.61
COL4A1P02462 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
COL4A1P02462 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
COL4A1P02462 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC5□□□□□ -1.61
COL4A1P02462 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC5□□□□□ -1.61
COL4A1P02462 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5□□□□□ -1.61
COL4A1P02462 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
COL4A1P02462 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
COL4A1P02462 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
COL4A1P02462 OR4A15-201ENST00000314706 1035 ntBASIC4.99□□□□□ -1.61
COL4A1P02462 AC067945.1-201ENST00000342609 618 ntBASIC4.99□□□□□ -1.61
COL4A1P02462 UBTFL3-201ENST00000418934 1024 ntBASIC4.99□□□□□ -1.61
COL4A1P02462 RPL23AP25-201ENST00000430973 463 ntBASIC4.99□□□□□ -1.61
COL4A1P02462 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC4.99□□□□□ -1.61
COL4A1P02462 UBTFL6-201ENST00000477929 1024 ntBASIC4.99□□□□□ -1.61
COL4A1P02462 AC110792.1-201ENST00000491826 472 ntBASIC4.99□□□□□ -1.61
COL4A1P02462 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.99□□□□□ -1.61
COL4A1P02462 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.99□□□□□ -1.61
COL4A1P02462 AC026403.1-201ENST00000518938 295 ntBASIC4.99□□□□□ -1.61
COL4A1P02462 AC087369.1-201ENST00000520775 996 ntBASIC4.99□□□□□ -1.61
COL4A1P02462 MTND1P6-201ENST00000523621 946 ntBASIC4.99□□□□□ -1.61
COL4A1P02462 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.99□□□□□ -1.61
COL4A1P02462 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC4.99□□□□□ -1.61
COL4A1P02462 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC4.99□□□□□ -1.61
COL4A1P02462 AC007599.1-201ENST00000568688 1174 ntBASIC4.99□□□□□ -1.61
COL4A1P02462 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.99□□□□□ -1.61
COL4A1P02462 AC023509.5-201ENST00000617434 807 ntBASIC4.99□□□□□ -1.61
COL4A1P02462 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
COL4A1P02462 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.99□□□□□ -1.61
COL4A1P02462 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
COL4A1P02462 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
COL4A1P02462 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
COL4A1P02462 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
COL4A1P02462 ZEB2-227ENST00000627532 9541 ntAPPRIS P2 TSL 1 (best) BASIC4.99□□□□□ -1.61
COL4A1P02462 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
COL4A1P02462 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
COL4A1P02462 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
COL4A1P02462 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
COL4A1P02462 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.99□□□□□ -1.61
COL4A1P02462 AL139247.1-201ENST00000422768 325 ntBASIC4.99□□□□□ -1.61
COL4A1P02462 SKP1P3-201ENST00000429280 487 ntBASIC4.99□□□□□ -1.61
COL4A1P02462 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
COL4A1P02462 AC104306.1-201ENST00000449702 371 ntBASIC4.99□□□□□ -1.61
COL4A1P02462 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC4.99□□□□□ -1.61
COL4A1P02462 NDUFA5P2-201ENST00000519723 344 ntBASIC4.99□□□□□ -1.61
COL4A1P02462 NAT2-202ENST00000520116 716 ntTSL 3 BASIC4.99□□□□□ -1.61
COL4A1P02462 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC4.99□□□□□ -1.61
COL4A1P02462 AC069200.1-201ENST00000609511 323 ntBASIC4.99□□□□□ -1.61
COL4A1P02462 AL354798.1-201ENST00000622505 329 ntBASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms