Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 AC091046.2-201ENST00000620775 665 ntBASIC4.82□□□□□ -1.64
LDLRP01130 AC012414.7-202ENST00000622705 1090 ntBASIC4.82□□□□□ -1.64
LDLRP01130 TEX41-254ENST00000626394 423 ntTSL 5 BASIC4.82□□□□□ -1.64
LDLRP01130 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC4.82□□□□□ -1.64
LDLRP01130 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
LDLRP01130 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
LDLRP01130 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
LDLRP01130 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
LDLRP01130 UGT2B26P-201ENST00000508672 1613 ntBASIC4.82□□□□□ -1.64
LDLRP01130 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
LDLRP01130 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
LDLRP01130 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC4.81□□□□□ -1.64
LDLRP01130 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
LDLRP01130 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC4.81□□□□□ -1.64
LDLRP01130 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC4.81□□□□□ -1.64
LDLRP01130 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
LDLRP01130 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
LDLRP01130 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
LDLRP01130 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
LDLRP01130 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
LDLRP01130 RNU6-252P-201ENST00000363232 107 ntBASIC4.81□□□□□ -1.64
LDLRP01130 RN7SKP224-201ENST00000364140 325 ntBASIC4.81□□□□□ -1.64
LDLRP01130 RNU6-1005P-201ENST00000384519 107 ntBASIC4.81□□□□□ -1.64
LDLRP01130 RNU6-925P-201ENST00000384629 104 ntBASIC4.81□□□□□ -1.64
LDLRP01130 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
LDLRP01130 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
LDLRP01130 RNU6-244P-201ENST00000391028 104 ntBASIC4.81□□□□□ -1.64
LDLRP01130 OR8V1P-201ENST00000395193 873 ntBASIC4.81□□□□□ -1.64
LDLRP01130 RSL24D1P1-201ENST00000404972 493 ntBASIC4.81□□□□□ -1.64
LDLRP01130 RN7SKP247-201ENST00000411094 308 ntBASIC4.81□□□□□ -1.64
LDLRP01130 XKRYP4-201ENST00000414395 483 ntBASIC4.81□□□□□ -1.64
LDLRP01130 VN1R37P-201ENST00000419096 748 ntBASIC4.81□□□□□ -1.64
LDLRP01130 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC4.81□□□□□ -1.64
LDLRP01130 AL606495.1-201ENST00000422100 813 ntBASIC4.81□□□□□ -1.64
LDLRP01130 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC4.81□□□□□ -1.64
LDLRP01130 AC016712.1-201ENST00000431088 378 ntBASIC4.81□□□□□ -1.64
LDLRP01130 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC4.81□□□□□ -1.64
LDLRP01130 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC4.81□□□□□ -1.64
LDLRP01130 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.81□□□□□ -1.64
LDLRP01130 XKRYP5-201ENST00000449659 483 ntBASIC4.81□□□□□ -1.64
LDLRP01130 FCF1P6-201ENST00000456841 595 ntBASIC4.81□□□□□ -1.64
LDLRP01130 PSMC1P13-201ENST00000458195 985 ntBASIC4.81□□□□□ -1.64
LDLRP01130 AC096741.1-201ENST00000472250 846 ntBASIC4.81□□□□□ -1.64
LDLRP01130 PPM1AP1-201ENST00000502740 1135 ntBASIC4.81□□□□□ -1.64
LDLRP01130 UBE2V1P12-201ENST00000503954 474 ntBASIC4.81□□□□□ -1.64
LDLRP01130 RPS4XP20-201ENST00000505751 772 ntBASIC4.81□□□□□ -1.64
LDLRP01130 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC4.81□□□□□ -1.64
LDLRP01130 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC4.81□□□□□ -1.64
LDLRP01130 AC121161.1-201ENST00000510606 652 ntBASIC4.81□□□□□ -1.64
LDLRP01130 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC4.81□□□□□ -1.64
LDLRP01130 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC4.81□□□□□ -1.64
LDLRP01130 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC4.81□□□□□ -1.64
LDLRP01130 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC4.81□□□□□ -1.64
LDLRP01130 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC4.81□□□□□ -1.64
LDLRP01130 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC4.81□□□□□ -1.64
LDLRP01130 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC4.81□□□□□ -1.64
LDLRP01130 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.81□□□□□ -1.64
LDLRP01130 AC233702.9-201ENST00000581528 203 ntBASIC4.81□□□□□ -1.64
LDLRP01130 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
LDLRP01130 AC011487.3-201ENST00000593607 453 ntBASIC4.81□□□□□ -1.64
LDLRP01130 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC4.81□□□□□ -1.64
LDLRP01130 AC112503.2-201ENST00000609005 552 ntBASIC4.81□□□□□ -1.64
LDLRP01130 AL050303.3-201ENST00000613704 284 ntBASIC4.81□□□□□ -1.64
LDLRP01130 AC022960.3-201ENST00000619794 441 ntBASIC4.81□□□□□ -1.64
LDLRP01130 AP000770.2-201ENST00000623694 100 ntBASIC4.81□□□□□ -1.64
LDLRP01130 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
LDLRP01130 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
LDLRP01130 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC4.81□□□□□ -1.64
LDLRP01130 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
LDLRP01130 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
LDLRP01130 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC4.8□□□□□ -1.64
LDLRP01130 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
LDLRP01130 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
LDLRP01130 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
LDLRP01130 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
LDLRP01130 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
LDLRP01130 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
LDLRP01130 RNU2-17P-201ENST00000410290 190 ntBASIC4.8□□□□□ -1.64
LDLRP01130 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
LDLRP01130 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC4.8□□□□□ -1.64
LDLRP01130 COX6B1P1-201ENST00000415962 213 ntBASIC4.8□□□□□ -1.64
LDLRP01130 TMBIM7P-201ENST00000418074 855 ntBASIC4.8□□□□□ -1.64
LDLRP01130 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.8□□□□□ -1.64
LDLRP01130 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC4.8□□□□□ -1.64
LDLRP01130 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC4.8□□□□□ -1.64
LDLRP01130 TRAPPC13P1-201ENST00000435991 1062 ntBASIC4.8□□□□□ -1.64
LDLRP01130 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC4.8□□□□□ -1.64
LDLRP01130 AP000936.3-201ENST00000438127 255 ntBASIC4.8□□□□□ -1.64
LDLRP01130 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC4.8□□□□□ -1.64
LDLRP01130 AC004980.3-201ENST00000447046 365 ntBASIC4.8□□□□□ -1.64
LDLRP01130 AC098826.2-201ENST00000452011 651 ntBASIC4.8□□□□□ -1.64
LDLRP01130 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
LDLRP01130 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC4.8□□□□□ -1.64
LDLRP01130 AC009127.1-201ENST00000467090 155 ntBASIC4.8□□□□□ -1.64
LDLRP01130 RPL7P16-201ENST00000479738 738 ntBASIC4.8□□□□□ -1.64
LDLRP01130 RPL7P40-201ENST00000481703 745 ntBASIC4.8□□□□□ -1.64
LDLRP01130 AC020890.1-201ENST00000491837 504 ntBASIC4.8□□□□□ -1.64
LDLRP01130 OR5H3P-201ENST00000502817 919 ntBASIC4.8□□□□□ -1.64
LDLRP01130 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC4.8□□□□□ -1.64
LDLRP01130 AC097173.1-201ENST00000505862 819 ntBASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms