Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
SSSCA1O60232 RPS29P19-201ENST00000479709 171 ntBASIC3.4□□□□□ -1.87
SSSCA1O60232 BNIP3P41-201ENST00000503774 571 ntBASIC3.4□□□□□ -1.87
SSSCA1O60232 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.4□□□□□ -1.87
SSSCA1O60232 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
SSSCA1O60232 AC110775.1-201ENST00000513721 462 ntBASIC3.4□□□□□ -1.87
SSSCA1O60232 RNA5SP143-201ENST00000516936 115 ntBASIC3.4□□□□□ -1.87
SSSCA1O60232 NARSP2-201ENST00000518524 679 ntBASIC3.4□□□□□ -1.87
SSSCA1O60232 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
SSSCA1O60232 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC3.4□□□□□ -1.87
SSSCA1O60232 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.4□□□□□ -1.87
SSSCA1O60232 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC3.4□□□□□ -1.87
SSSCA1O60232 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC3.4□□□□□ -1.87
SSSCA1O60232 AP001160.4-201ENST00000596971 382 ntBASIC3.4□□□□□ -1.87
SSSCA1O60232 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC3.4□□□□□ -1.87
SSSCA1O60232 SUMO2P15-201ENST00000604285 278 ntBASIC3.4□□□□□ -1.87
SSSCA1O60232 HMGB1P50-201ENST00000605814 607 ntBASIC3.4□□□□□ -1.87
SSSCA1O60232 AP003392.5-201ENST00000607857 415 ntBASIC3.4□□□□□ -1.87
SSSCA1O60232 AP000255.1-201ENST00000610276 676 ntBASIC3.4□□□□□ -1.87
SSSCA1O60232 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
SSSCA1O60232 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC3.4□□□□□ -1.87
SSSCA1O60232 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.4□□□□□ -1.87
SSSCA1O60232 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC3.4□□□□□ -1.87
SSSCA1O60232 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
SSSCA1O60232 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC3.4□□□□□ -1.87
SSSCA1O60232 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC3.4□□□□□ -1.87
SSSCA1O60232 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
SSSCA1O60232 AL031985.3-201ENST00000565390 2449 ntBASIC3.4□□□□□ -1.87
SSSCA1O60232 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
SSSCA1O60232 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
SSSCA1O60232 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SSSCA1O60232 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.39□□□□□ -1.87
SSSCA1O60232 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SSSCA1O60232 FAM35DP-201ENST00000323387 2712 ntBASIC3.39□□□□□ -1.87
SSSCA1O60232 SDAD1P1-202ENST00000524156 2051 ntBASIC3.39□□□□□ -1.87
SSSCA1O60232 AC092111.2-201ENST00000611627 1414 ntBASIC3.39□□□□□ -1.87
SSSCA1O60232 AC008033.1-201ENST00000216407 1162 ntBASIC3.39□□□□□ -1.87
SSSCA1O60232 RN7SKP149-201ENST00000363008 344 ntBASIC3.39□□□□□ -1.87
SSSCA1O60232 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
SSSCA1O60232 ADIG-201ENST00000373348 430 ntTSL 2 BASIC3.39□□□□□ -1.87
SSSCA1O60232 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
SSSCA1O60232 SNORA37-201ENST00000384504 129 ntBASIC3.39□□□□□ -1.87
SSSCA1O60232 TRAV35-201ENST00000390462 330 ntBASIC3.39□□□□□ -1.87
SSSCA1O60232 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC3.39□□□□□ -1.87
SSSCA1O60232 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC3.39□□□□□ -1.87
SSSCA1O60232 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC3.39□□□□□ -1.87
SSSCA1O60232 AL034379.1-201ENST00000423216 253 ntBASIC3.39□□□□□ -1.87
SSSCA1O60232 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC3.39□□□□□ -1.87
SSSCA1O60232 AC011742.1-201ENST00000431448 434 ntBASIC3.39□□□□□ -1.87
SSSCA1O60232 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC3.39□□□□□ -1.87
SSSCA1O60232 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SSSCA1O60232 KRTAP8-2P-201ENST00000440620 186 ntBASIC3.39□□□□□ -1.87
SSSCA1O60232 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC3.39□□□□□ -1.87
SSSCA1O60232 DHFRP3-201ENST00000455595 559 ntBASIC3.39□□□□□ -1.87
SSSCA1O60232 AC107015.1-201ENST00000466902 747 ntBASIC3.39□□□□□ -1.87
SSSCA1O60232 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC3.39□□□□□ -1.87
SSSCA1O60232 RPL31P61-201ENST00000496160 376 ntBASIC3.39□□□□□ -1.87
SSSCA1O60232 AC083829.1-201ENST00000503756 657 ntBASIC3.39□□□□□ -1.87
SSSCA1O60232 HPRT1P2-201ENST00000505250 544 ntBASIC3.39□□□□□ -1.87
SSSCA1O60232 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC3.39□□□□□ -1.87
SSSCA1O60232 AC147055.3-201ENST00000510547 851 ntBASIC3.39□□□□□ -1.87
SSSCA1O60232 MIR2114-201ENST00000516645 80 ntBASIC3.39□□□□□ -1.87
SSSCA1O60232 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC3.39□□□□□ -1.87
SSSCA1O60232 OR5AZ1P-201ENST00000527448 943 ntBASIC3.39□□□□□ -1.87
SSSCA1O60232 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC3.39□□□□□ -1.87
SSSCA1O60232 GNRHR2P1-201ENST00000555315 631 ntBASIC3.39□□□□□ -1.87
SSSCA1O60232 AC011445.2-201ENST00000599274 173 ntBASIC3.39□□□□□ -1.87
SSSCA1O60232 AC025946.2-201ENST00000603398 234 ntBASIC3.39□□□□□ -1.87
SSSCA1O60232 AC025175.1-201ENST00000606482 759 ntBASIC3.39□□□□□ -1.87
SSSCA1O60232 AC026368.1-201ENST00000614934 690 ntBASIC3.39□□□□□ -1.87
SSSCA1O60232 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC3.39□□□□□ -1.87
SSSCA1O60232 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.39□□□□□ -1.87
SSSCA1O60232 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC3.39□□□□□ -1.87
SSSCA1O60232 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
SSSCA1O60232 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
SSSCA1O60232 MARK2P15-201ENST00000432204 2186 ntBASIC3.39□□□□□ -1.87
SSSCA1O60232 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SSSCA1O60232 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
SSSCA1O60232 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
SSSCA1O60232 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC3.38□□□□□ -1.87
SSSCA1O60232 MTND5P12-201ENST00000502851 1449 ntBASIC3.38□□□□□ -1.87
SSSCA1O60232 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
SSSCA1O60232 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.38□□□□□ -1.87
SSSCA1O60232 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
SSSCA1O60232 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
SSSCA1O60232 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
SSSCA1O60232 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
SSSCA1O60232 RNU1-130P-201ENST00000363930 160 ntBASIC3.38□□□□□ -1.87
SSSCA1O60232 SNORA51.8-201ENST00000384234 132 ntBASIC3.38□□□□□ -1.87
SSSCA1O60232 RNA5SP397-201ENST00000391323 118 ntBASIC3.38□□□□□ -1.87
SSSCA1O60232 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
SSSCA1O60232 RN7SKP106-201ENST00000410832 272 ntBASIC3.38□□□□□ -1.87
SSSCA1O60232 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC3.38□□□□□ -1.87
SSSCA1O60232 PGBD4P8-201ENST00000412993 562 ntBASIC3.38□□□□□ -1.87
SSSCA1O60232 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC3.38□□□□□ -1.87
SSSCA1O60232 PTP4A1P1-201ENST00000420539 515 ntBASIC3.38□□□□□ -1.87
SSSCA1O60232 USP12PY-201ENST00000427677 1064 ntBASIC3.38□□□□□ -1.87
SSSCA1O60232 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC3.38□□□□□ -1.87
SSSCA1O60232 AC096638.2-201ENST00000434965 711 ntBASIC3.38□□□□□ -1.87
SSSCA1O60232 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms