Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 AP000432.2-201ENST00000624164 2048 ntBASIC7.5□□□□□ -1.21
CUX2O14529 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
CUX2O14529 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC7.5□□□□□ -1.21
CUX2O14529 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC7.49□□□□□ -1.21
CUX2O14529 AC008549.2-201ENST00000333482 706 ntBASIC7.49□□□□□ -1.21
CUX2O14529 U8.11-201ENST00000384699 133 ntBASIC7.49□□□□□ -1.21
CUX2O14529 U8.12-201ENST00000384701 133 ntBASIC7.49□□□□□ -1.21
CUX2O14529 SNRPFP1-201ENST00000414761 252 ntBASIC7.49□□□□□ -1.21
CUX2O14529 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC7.49□□□□□ -1.21
CUX2O14529 U8.18-201ENST00000459285 133 ntBASIC7.49□□□□□ -1.21
CUX2O14529 AP001486.1-201ENST00000463339 476 ntBASIC7.49□□□□□ -1.21
CUX2O14529 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
CUX2O14529 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC7.49□□□□□ -1.21
CUX2O14529 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
CUX2O14529 AP005435.3-201ENST00000531260 3198 ntBASIC7.49□□□□□ -1.21
CUX2O14529 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC7.49□□□□□ -1.21
CUX2O14529 AL359219.2-201ENST00000555184 348 ntBASIC7.49□□□□□ -1.21
CUX2O14529 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC7.49□□□□□ -1.21
CUX2O14529 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
CUX2O14529 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
CUX2O14529 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
CUX2O14529 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
CUX2O14529 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
CUX2O14529 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
CUX2O14529 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC7.49□□□□□ -1.21
CUX2O14529 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC7.49□□□□□ -1.21
CUX2O14529 MIR3065-201ENST00000390137 79 ntBASIC7.49□□□□□ -1.21
CUX2O14529 CYCSP24-201ENST00000445119 316 ntBASIC7.49□□□□□ -1.21
CUX2O14529 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC7.49□□□□□ -1.21
CUX2O14529 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
CUX2O14529 AC079587.1-201ENST00000603846 277 ntBASIC7.49□□□□□ -1.21
CUX2O14529 AC016957.2-201ENST00000616998 848 ntBASIC7.49□□□□□ -1.21
CUX2O14529 AL445363.3-201ENST00000623080 671 ntBASIC7.49□□□□□ -1.21
CUX2O14529 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC7.48□□□□□ -1.21
CUX2O14529 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC7.48□□□□□ -1.21
CUX2O14529 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
CUX2O14529 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
CUX2O14529 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
CUX2O14529 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC7.48□□□□□ -1.21
CUX2O14529 AC099654.3-201ENST00000447087 1546 ntBASIC7.48□□□□□ -1.21
CUX2O14529 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC7.48□□□□□ -1.21
CUX2O14529 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC7.48□□□□□ -1.21
CUX2O14529 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC7.48□□□□□ -1.21
CUX2O14529 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
CUX2O14529 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
CUX2O14529 SYF2P2-201ENST00000417620 583 ntBASIC7.48□□□□□ -1.21
CUX2O14529 AL159987.2-201ENST00000432754 307 ntBASIC7.48□□□□□ -1.21
CUX2O14529 RPL12P46-201ENST00000436610 195 ntBASIC7.48□□□□□ -1.21
CUX2O14529 AC006994.1-201ENST00000438212 839 ntBASIC7.48□□□□□ -1.21
CUX2O14529 SETP4-201ENST00000455717 868 ntBASIC7.48□□□□□ -1.21
CUX2O14529 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC7.48□□□□□ -1.21
CUX2O14529 AC090602.1-201ENST00000469695 252 ntBASIC7.48□□□□□ -1.21
CUX2O14529 OR8G7P-201ENST00000616658 848 ntBASIC7.48□□□□□ -1.21
CUX2O14529 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC7.48□□□□□ -1.21
CUX2O14529 AC100778.3-201ENST00000580060 1750 ntBASIC7.48□□□□□ -1.21
CUX2O14529 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
CUX2O14529 SNORA57.3-201ENST00000411095 141 ntBASIC7.47□□□□□ -1.21
CUX2O14529 PTMAP3-201ENST00000447474 330 ntBASIC7.47□□□□□ -1.21
CUX2O14529 RPL5P24-201ENST00000463742 885 ntBASIC7.47□□□□□ -1.21
CUX2O14529 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC7.47□□□□□ -1.21
CUX2O14529 SNRPCP3-201ENST00000474888 476 ntBASIC7.47□□□□□ -1.21
CUX2O14529 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC7.47□□□□□ -1.21
CUX2O14529 CYCSP40-201ENST00000575927 294 ntBASIC7.47□□□□□ -1.21
CUX2O14529 AC127024.5-201ENST00000580085 462 ntBASIC7.47□□□□□ -1.21
CUX2O14529 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC7.47□□□□□ -1.21
CUX2O14529 AL513477.2-201ENST00000607858 568 ntBASIC7.47□□□□□ -1.21
CUX2O14529 AP000648.2-201ENST00000624182 404 ntBASIC7.47□□□□□ -1.21
CUX2O14529 AC055839.1-201ENST00000634467 498 ntBASIC7.47□□□□□ -1.21
CUX2O14529 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
CUX2O14529 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
CUX2O14529 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
CUX2O14529 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
CUX2O14529 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC7.47□□□□□ -1.21
CUX2O14529 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
CUX2O14529 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
CUX2O14529 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC7.46□□□□□ -1.21
CUX2O14529 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC7.46□□□□□ -1.21
CUX2O14529 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC7.46□□□□□ -1.22
CUX2O14529 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC7.46□□□□□ -1.22
CUX2O14529 RNU1-14P-201ENST00000362759 152 ntBASIC7.46□□□□□ -1.22
CUX2O14529 Y_RNA.510-201ENST00000384511 114 ntBASIC7.46□□□□□ -1.22
CUX2O14529 RNU2-65P-201ENST00000410162 185 ntBASIC7.46□□□□□ -1.22
CUX2O14529 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC7.46□□□□□ -1.22
CUX2O14529 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
CUX2O14529 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC7.46□□□□□ -1.22
CUX2O14529 RNA5SP519-201ENST00000516480 119 ntBASIC7.46□□□□□ -1.22
CUX2O14529 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC7.46□□□□□ -1.22
CUX2O14529 MEG8-217ENST00000556637 924 ntTSL 5 BASIC7.46□□□□□ -1.22
CUX2O14529 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC7.46□□□□□ -1.22
CUX2O14529 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC7.46□□□□□ -1.22
CUX2O14529 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC7.46□□□□□ -1.22
CUX2O14529 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
CUX2O14529 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
CUX2O14529 CASC19-261ENST00000641853 1638 ntBASIC7.45□□□□□ -1.22
CUX2O14529 DDX18P5-201ENST00000534547 1306 ntBASIC7.45□□□□□ -1.22
CUX2O14529 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC7.45□□□□□ -1.22
CUX2O14529 OR4A15-201ENST00000314706 1035 ntBASIC7.45□□□□□ -1.22
CUX2O14529 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
CUX2O14529 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC7.45□□□□□ -1.22
CUX2O14529 RN7SKP141-201ENST00000516167 338 ntBASIC7.45□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms