Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC6.57□□□□□ -1.36
SOX1O00570 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC6.57□□□□□ -1.36
SOX1O00570 ABBA01000935.2-201ENST00000637477 838 ntBASIC6.57□□□□□ -1.36
SOX1O00570 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC6.57□□□□□ -1.36
SOX1O00570 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC6.57□□□□□ -1.36
SOX1O00570 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC6.57□□□□□ -1.36
SOX1O00570 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
SOX1O00570 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC6.57□□□□□ -1.36
SOX1O00570 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC6.57□□□□□ -1.36
SOX1O00570 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SOX1O00570 MROH9-201ENST00000367758 2227 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
SOX1O00570 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC6.57□□□□□ -1.36
SOX1O00570 DCAF10-201ENST00000242323 7393 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SOX1O00570 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC6.57□□□□□ -1.36
SOX1O00570 OPALIN-202ENST00000393870 3578 ntTSL 3 BASIC6.57□□□□□ -1.36
SOX1O00570 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
SOX1O00570 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
SOX1O00570 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SOX1O00570 ZHX3-217ENST00000560361 4140 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
SOX1O00570 ZNF83-205ENST00000594682 2890 ntTSL 4 BASIC6.56□□□□□ -1.36
SOX1O00570 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC6.56□□□□□ -1.36
SOX1O00570 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
SOX1O00570 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
SOX1O00570 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SOX1O00570 AC107982.1-201ENST00000507171 1300 ntBASIC6.56□□□□□ -1.36
SOX1O00570 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SOX1O00570 MRPS27-202ENST00000457646 2628 ntTSL 2 BASIC6.56□□□□□ -1.36
SOX1O00570 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
SOX1O00570 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
SOX1O00570 AL031985.3-201ENST00000565390 2449 ntBASIC6.56□□□□□ -1.36
SOX1O00570 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
SOX1O00570 OR2T2-203ENST00000642130 3331 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
SOX1O00570 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
SOX1O00570 AL359551.1-201ENST00000442726 2900 ntTSL 2 BASIC6.56□□□□□ -1.36
SOX1O00570 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
SOX1O00570 RNU6-839P-201ENST00000363347 108 ntBASIC6.56□□□□□ -1.36
SOX1O00570 RNU6-723P-201ENST00000383973 107 ntBASIC6.56□□□□□ -1.36
SOX1O00570 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
SOX1O00570 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
SOX1O00570 RPL31P1-201ENST00000398116 372 ntBASIC6.56□□□□□ -1.36
SOX1O00570 TMSB4XP8-201ENST00000402089 135 ntBASIC6.56□□□□□ -1.36
SOX1O00570 AC109780.2-201ENST00000413467 845 ntBASIC6.56□□□□□ -1.36
SOX1O00570 TMSB4XP6-201ENST00000415187 135 ntBASIC6.56□□□□□ -1.36
SOX1O00570 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC6.56□□□□□ -1.36
SOX1O00570 RPS7P8-201ENST00000418311 581 ntBASIC6.56□□□□□ -1.36
SOX1O00570 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC6.56□□□□□ -1.36
SOX1O00570 EIF4A1P7-201ENST00000421800 1220 ntBASIC6.56□□□□□ -1.36
SOX1O00570 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC6.56□□□□□ -1.36
SOX1O00570 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC6.56□□□□□ -1.36
SOX1O00570 TMSB4XP1-201ENST00000424567 135 ntBASIC6.56□□□□□ -1.36
SOX1O00570 AL356583.2-201ENST00000426536 280 ntBASIC6.56□□□□□ -1.36
SOX1O00570 AC008850.1-201ENST00000427546 362 ntBASIC6.56□□□□□ -1.36
SOX1O00570 AC126120.1-201ENST00000431082 470 ntBASIC6.56□□□□□ -1.36
SOX1O00570 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC6.56□□□□□ -1.36
SOX1O00570 AC104850.1-201ENST00000435940 476 ntBASIC6.56□□□□□ -1.36
SOX1O00570 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC6.56□□□□□ -1.36
SOX1O00570 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC6.56□□□□□ -1.36
SOX1O00570 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC6.56□□□□□ -1.36
SOX1O00570 BX322784.1-201ENST00000455793 1077 ntBASIC6.56□□□□□ -1.36
SOX1O00570 PSMC1P13-201ENST00000458195 985 ntBASIC6.56□□□□□ -1.36
SOX1O00570 AC104687.1-201ENST00000485829 412 ntBASIC6.56□□□□□ -1.36
SOX1O00570 AC073610.1-201ENST00000489971 396 ntBASIC6.56□□□□□ -1.36
SOX1O00570 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC6.56□□□□□ -1.36
SOX1O00570 RPL7L1P13-201ENST00000511702 739 ntBASIC6.56□□□□□ -1.36
SOX1O00570 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC6.56□□□□□ -1.36
SOX1O00570 RGS5-218ENST00000526176 574 ntTSL 4 BASIC6.56□□□□□ -1.36
SOX1O00570 AP001189.2-201ENST00000527320 189 ntBASIC6.56□□□□□ -1.36
SOX1O00570 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC6.56□□□□□ -1.36
SOX1O00570 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC6.56□□□□□ -1.36
SOX1O00570 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC6.56□□□□□ -1.36
SOX1O00570 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC6.56□□□□□ -1.36
SOX1O00570 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC6.56□□□□□ -1.36
SOX1O00570 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC6.56□□□□□ -1.36
SOX1O00570 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC6.56□□□□□ -1.36
SOX1O00570 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC6.56□□□□□ -1.36
SOX1O00570 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC6.56□□□□□ -1.36
SOX1O00570 AP001836.1-201ENST00000604675 523 ntBASIC6.56□□□□□ -1.36
SOX1O00570 AC008115.3-201ENST00000614874 549 ntBASIC6.56□□□□□ -1.36
SOX1O00570 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC6.56□□□□□ -1.36
SOX1O00570 AC010338.1-201ENST00000621823 717 ntBASIC6.56□□□□□ -1.36
SOX1O00570 OFCC1-218ENST00000622909 754 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
SOX1O00570 AP003400.3-201ENST00000624904 346 ntBASIC6.56□□□□□ -1.36
SOX1O00570 BX284613.1-201ENST00000452221 1641 ntBASIC6.56□□□□□ -1.36
SOX1O00570 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC6.56□□□□□ -1.36
SOX1O00570 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
SOX1O00570 MELK-207ENST00000536860 2342 ntTSL 2 BASIC6.56□□□□□ -1.36
SOX1O00570 METTL21EP-202ENST00000605100 2312 ntTSL 2 BASIC6.56□□□□□ -1.36
SOX1O00570 ERLIN2-201ENST00000276461 6073 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SOX1O00570 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
SOX1O00570 DEFB132-201ENST00000382376 2121 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SOX1O00570 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
SOX1O00570 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
SOX1O00570 AL450423.1-201ENST00000615176 1857 ntTSL 2 BASIC6.56□□□□□ -1.36
SOX1O00570 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC6.55□□□□□ -1.36
SOX1O00570 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC6.55□□□□□ -1.36
SOX1O00570 PTPRG-AS1-204ENST00000474795 2661 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
SOX1O00570 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC6.55□□□□□ -1.36
SOX1O00570 ZNF254-206ENST00000611359 3982 ntTSL 3 BASIC6.55□□□□□ -1.36
SOX1O00570 CDR1-202ENST00000625883 1485 ntBASIC6.55□□□□□ -1.36
SOX1O00570 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms