Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 AL451050.1-201ENST00000450126 415 ntBASIC3.62□□□□□ -1.83
SDCBPO00560 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC3.62□□□□□ -1.83
SDCBPO00560 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC3.62□□□□□ -1.83
SDCBPO00560 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC3.62□□□□□ -1.83
SDCBPO00560 AP006289.1-201ENST00000538089 277 ntBASIC3.62□□□□□ -1.83
SDCBPO00560 AC027176.2-201ENST00000559166 746 ntBASIC3.62□□□□□ -1.83
SDCBPO00560 AC018552.1-201ENST00000562099 811 ntBASIC3.62□□□□□ -1.83
SDCBPO00560 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC3.62□□□□□ -1.83
SDCBPO00560 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
SDCBPO00560 AP001160.4-201ENST00000596971 382 ntBASIC3.62□□□□□ -1.83
SDCBPO00560 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
SDCBPO00560 AC131238.1-201ENST00000617135 328 ntBASIC3.62□□□□□ -1.83
SDCBPO00560 AC233309.1-201ENST00000619522 751 ntBASIC3.62□□□□□ -1.83
SDCBPO00560 AC074276.2-201ENST00000619891 348 ntBASIC3.62□□□□□ -1.83
SDCBPO00560 AC138907.10-201ENST00000623708 983 ntBASIC3.62□□□□□ -1.83
SDCBPO00560 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.62□□□□□ -1.83
SDCBPO00560 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
SDCBPO00560 AC097504.1-201ENST00000515103 2415 ntBASIC3.62□□□□□ -1.83
SDCBPO00560 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
SDCBPO00560 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
SDCBPO00560 Z82217.1-201ENST00000625157 8149 ntBASIC3.62□□□□□ -1.83
SDCBPO00560 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.61□□□□□ -1.83
SDCBPO00560 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SDCBPO00560 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
SDCBPO00560 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC3.61□□□□□ -1.83
SDCBPO00560 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SDCBPO00560 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
SDCBPO00560 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SDCBPO00560 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SDCBPO00560 MIR3065-201ENST00000390137 79 ntBASIC3.61□□□□□ -1.83
SDCBPO00560 ATP5F1P2-201ENST00000398143 760 ntBASIC3.61□□□□□ -1.83
SDCBPO00560 AC097374.1-203ENST00000400783 485 ntBASIC3.61□□□□□ -1.83
SDCBPO00560 AMMECR1LP1-201ENST00000415152 841 ntBASIC3.61□□□□□ -1.83
SDCBPO00560 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SDCBPO00560 AC069213.2-201ENST00000420238 366 ntBASIC3.61□□□□□ -1.83
SDCBPO00560 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC3.61□□□□□ -1.83
SDCBPO00560 AC006065.1-201ENST00000422539 802 ntBASIC3.61□□□□□ -1.83
SDCBPO00560 RPS12P5-201ENST00000423449 371 ntBASIC3.61□□□□□ -1.83
SDCBPO00560 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC3.61□□□□□ -1.83
SDCBPO00560 AC011998.1-201ENST00000433403 117 ntBASIC3.61□□□□□ -1.83
SDCBPO00560 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC3.61□□□□□ -1.83
SDCBPO00560 AC114495.1-201ENST00000441274 436 ntBASIC3.61□□□□□ -1.83
SDCBPO00560 FGF7P3-201ENST00000454645 303 ntBASIC3.61□□□□□ -1.83
SDCBPO00560 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC3.61□□□□□ -1.83
SDCBPO00560 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC3.61□□□□□ -1.83
SDCBPO00560 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC3.61□□□□□ -1.83
SDCBPO00560 RPL23AP72-201ENST00000492447 435 ntBASIC3.61□□□□□ -1.83
SDCBPO00560 F11-205ENST00000492972 1204 ntTSL 2 BASIC3.61□□□□□ -1.83
SDCBPO00560 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC3.61□□□□□ -1.83
SDCBPO00560 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC3.61□□□□□ -1.83
SDCBPO00560 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
SDCBPO00560 RFPL4AP3-201ENST00000515267 345 ntBASIC3.61□□□□□ -1.83
SDCBPO00560 AP000827.1-201ENST00000527814 258 ntBASIC3.61□□□□□ -1.83
SDCBPO00560 OR5BC1P-201ENST00000529327 739 ntBASIC3.61□□□□□ -1.83
SDCBPO00560 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SDCBPO00560 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC3.61□□□□□ -1.83
SDCBPO00560 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC3.61□□□□□ -1.83
SDCBPO00560 AC008782.1-201ENST00000603386 430 ntBASIC3.61□□□□□ -1.83
SDCBPO00560 AC002044.3-201ENST00000623314 541 ntBASIC3.61□□□□□ -1.83
SDCBPO00560 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SDCBPO00560 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.61□□□□□ -1.83
SDCBPO00560 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SDCBPO00560 MAPK10-253ENST00000641010 4072 ntBASIC3.61□□□□□ -1.83
SDCBPO00560 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC3.61□□□□□ -1.83
SDCBPO00560 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
SDCBPO00560 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC3.6□□□□□ -1.83
SDCBPO00560 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SDCBPO00560 OR56B2P-202ENST00000641377 2453 ntBASIC3.6□□□□□ -1.83
SDCBPO00560 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC3.6□□□□□ -1.83
SDCBPO00560 RNA5SP175-201ENST00000364275 119 ntBASIC3.6□□□□□ -1.83
SDCBPO00560 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC3.6□□□□□ -1.83
SDCBPO00560 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
SDCBPO00560 AC007068.1-201ENST00000396690 844 ntBASIC3.6□□□□□ -1.83
SDCBPO00560 AL607077.1-201ENST00000401718 499 ntBASIC3.6□□□□□ -1.83
SDCBPO00560 JKAMPP1-201ENST00000413804 919 ntBASIC3.6□□□□□ -1.83
SDCBPO00560 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SDCBPO00560 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SDCBPO00560 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC3.6□□□□□ -1.83
SDCBPO00560 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SDCBPO00560 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC3.6□□□□□ -1.83
SDCBPO00560 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC3.6□□□□□ -1.83
SDCBPO00560 AC104306.1-201ENST00000449702 371 ntBASIC3.6□□□□□ -1.83
SDCBPO00560 AL513533.1-201ENST00000453728 415 ntBASIC3.6□□□□□ -1.83
SDCBPO00560 MTND2P28-201ENST00000457540 1044 ntBASIC3.6□□□□□ -1.83
SDCBPO00560 AC104849.1-201ENST00000462623 405 ntBASIC3.6□□□□□ -1.83
SDCBPO00560 AC053481.1-201ENST00000467217 306 ntBASIC3.6□□□□□ -1.83
SDCBPO00560 OR52A4P-201ENST00000472867 958 ntBASIC3.6□□□□□ -1.83
SDCBPO00560 AC006517.1-201ENST00000480485 328 ntBASIC3.6□□□□□ -1.83
SDCBPO00560 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC3.6□□□□□ -1.83
SDCBPO00560 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC3.6□□□□□ -1.83
SDCBPO00560 RPS6P4-201ENST00000494693 758 ntBASIC3.6□□□□□ -1.83
SDCBPO00560 IGLVIV-65-201ENST00000517313 360 ntBASIC3.6□□□□□ -1.83
SDCBPO00560 IGLVVI-25-1-201ENST00000521893 249 ntBASIC3.6□□□□□ -1.83
SDCBPO00560 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC3.6□□□□□ -1.83
SDCBPO00560 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC3.6□□□□□ -1.83
SDCBPO00560 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC3.6□□□□□ -1.83
SDCBPO00560 AC084783.1-201ENST00000565846 910 ntBASIC3.6□□□□□ -1.83
SDCBPO00560 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC3.6□□□□□ -1.83
SDCBPO00560 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC3.6□□□□□ -1.83
SDCBPO00560 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 140.2 ms