Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.46□□□□□ -1.7
NPIPA3F8WFD2 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC4.46□□□□□ -1.7
NPIPA3F8WFD2 AC234781.3-201ENST00000452540 973 ntBASIC4.46□□□□□ -1.7
NPIPA3F8WFD2 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC4.46□□□□□ -1.7
NPIPA3F8WFD2 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC4.46□□□□□ -1.7
NPIPA3F8WFD2 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC4.46□□□□□ -1.7
NPIPA3F8WFD2 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC4.46□□□□□ -1.7
NPIPA3F8WFD2 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC4.46□□□□□ -1.7
NPIPA3F8WFD2 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.46□□□□□ -1.7
NPIPA3F8WFD2 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
NPIPA3F8WFD2 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC4.46□□□□□ -1.7
NPIPA3F8WFD2 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC4.46□□□□□ -1.7
NPIPA3F8WFD2 MIR4660-201ENST00000583549 74 ntBASIC4.46□□□□□ -1.7
NPIPA3F8WFD2 AC120053.1-201ENST00000607706 736 ntBASIC4.46□□□□□ -1.7
NPIPA3F8WFD2 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC4.46□□□□□ -1.7
NPIPA3F8WFD2 BX005214.3-202ENST00000619809 325 ntBASIC4.46□□□□□ -1.7
NPIPA3F8WFD2 AC006249.1-201ENST00000621223 471 ntBASIC4.46□□□□□ -1.7
NPIPA3F8WFD2 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC4.46□□□□□ -1.7
NPIPA3F8WFD2 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC4.46□□□□□ -1.7
NPIPA3F8WFD2 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.46□□□□□ -1.7
NPIPA3F8WFD2 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
NPIPA3F8WFD2 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
NPIPA3F8WFD2 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
NPIPA3F8WFD2 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
NPIPA3F8WFD2 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
NPIPA3F8WFD2 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
NPIPA3F8WFD2 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.46□□□□□ -1.7
NPIPA3F8WFD2 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
NPIPA3F8WFD2 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
NPIPA3F8WFD2 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
NPIPA3F8WFD2 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.45□□□□□ -1.7
NPIPA3F8WFD2 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
NPIPA3F8WFD2 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
NPIPA3F8WFD2 ECM1P2-201ENST00000503354 1577 ntBASIC4.45□□□□□ -1.7
NPIPA3F8WFD2 AC011447.7-201ENST00000624228 1590 ntBASIC4.45□□□□□ -1.7
NPIPA3F8WFD2 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.45□□□□□ -1.7
NPIPA3F8WFD2 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.45□□□□□ -1.7
NPIPA3F8WFD2 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
NPIPA3F8WFD2 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
NPIPA3F8WFD2 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
NPIPA3F8WFD2 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
NPIPA3F8WFD2 RNVU1-6-201ENST00000364688 164 ntBASIC4.45□□□□□ -1.7
NPIPA3F8WFD2 RNU6-304P-201ENST00000364855 107 ntBASIC4.45□□□□□ -1.7
NPIPA3F8WFD2 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
NPIPA3F8WFD2 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
NPIPA3F8WFD2 AC013442.1-201ENST00000397347 228 ntBASIC4.45□□□□□ -1.7
NPIPA3F8WFD2 RPS16P5-201ENST00000406501 404 ntBASIC4.45□□□□□ -1.7
NPIPA3F8WFD2 RNA5SP113-201ENST00000410486 84 ntBASIC4.45□□□□□ -1.7
NPIPA3F8WFD2 AC016397.1-201ENST00000412463 242 ntBASIC4.45□□□□□ -1.7
NPIPA3F8WFD2 GTF2IP5-201ENST00000414608 731 ntBASIC4.45□□□□□ -1.7
NPIPA3F8WFD2 AL158825.1-201ENST00000414735 521 ntBASIC4.45□□□□□ -1.7
NPIPA3F8WFD2 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC4.45□□□□□ -1.7
NPIPA3F8WFD2 AC007559.1-201ENST00000428736 355 ntBASIC4.45□□□□□ -1.7
NPIPA3F8WFD2 AC005189.1-201ENST00000431286 310 ntBASIC4.45□□□□□ -1.7
NPIPA3F8WFD2 AC093414.1-201ENST00000434712 514 ntBASIC4.45□□□□□ -1.7
NPIPA3F8WFD2 AL353093.1-201ENST00000441292 436 ntBASIC4.45□□□□□ -1.7
NPIPA3F8WFD2 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.45□□□□□ -1.7
NPIPA3F8WFD2 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.45□□□□□ -1.7
NPIPA3F8WFD2 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
NPIPA3F8WFD2 MOB1AP2-201ENST00000446060 614 ntBASIC4.45□□□□□ -1.7
NPIPA3F8WFD2 AC099063.2-201ENST00000446360 662 ntBASIC4.45□□□□□ -1.7
NPIPA3F8WFD2 SLC25A18P1-201ENST00000449385 454 ntBASIC4.45□□□□□ -1.7
NPIPA3F8WFD2 RPL7P55-201ENST00000450522 746 ntBASIC4.45□□□□□ -1.7
NPIPA3F8WFD2 AL691482.1-201ENST00000453255 87 ntBASIC4.45□□□□□ -1.7
NPIPA3F8WFD2 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
NPIPA3F8WFD2 NDUFA12P1-201ENST00000455914 406 ntBASIC4.45□□□□□ -1.7
NPIPA3F8WFD2 RPL23AP12-201ENST00000467573 473 ntBASIC4.45□□□□□ -1.7
NPIPA3F8WFD2 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC4.45□□□□□ -1.7
NPIPA3F8WFD2 AC015908.1-201ENST00000478739 476 ntBASIC4.45□□□□□ -1.7
NPIPA3F8WFD2 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
NPIPA3F8WFD2 AC112518.2-201ENST00000508565 425 ntBASIC4.45□□□□□ -1.7
NPIPA3F8WFD2 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC4.45□□□□□ -1.7
NPIPA3F8WFD2 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC4.45□□□□□ -1.7
NPIPA3F8WFD2 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC4.45□□□□□ -1.7
NPIPA3F8WFD2 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.45□□□□□ -1.7
NPIPA3F8WFD2 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC4.45□□□□□ -1.7
NPIPA3F8WFD2 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC4.45□□□□□ -1.7
NPIPA3F8WFD2 AC079610.2-201ENST00000604818 690 ntBASIC4.45□□□□□ -1.7
NPIPA3F8WFD2 AC026741.1-201ENST00000605892 482 ntBASIC4.45□□□□□ -1.7
NPIPA3F8WFD2 AL049794.2-201ENST00000616301 365 ntBASIC4.45□□□□□ -1.7
NPIPA3F8WFD2 AC016957.2-201ENST00000616998 848 ntBASIC4.45□□□□□ -1.7
NPIPA3F8WFD2 AC253576.2-201ENST00000618815 580 ntBASIC4.45□□□□□ -1.7
NPIPA3F8WFD2 AP002967.1-201ENST00000624203 539 ntBASIC4.45□□□□□ -1.7
NPIPA3F8WFD2 AC015726.3-201ENST00000624501 418 ntBASIC4.45□□□□□ -1.7
NPIPA3F8WFD2 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
NPIPA3F8WFD2 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.45□□□□□ -1.7
NPIPA3F8WFD2 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.45□□□□□ -1.7
NPIPA3F8WFD2 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
NPIPA3F8WFD2 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
NPIPA3F8WFD2 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC4.45□□□□□ -1.7
NPIPA3F8WFD2 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
NPIPA3F8WFD2 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.45□□□□□ -1.7
NPIPA3F8WFD2 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
NPIPA3F8WFD2 MAPK10-320ENST00000641462 6696 ntBASIC4.45□□□□□ -1.7
NPIPA3F8WFD2 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
NPIPA3F8WFD2 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
NPIPA3F8WFD2 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.45□□□□□ -1.7
NPIPA3F8WFD2 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
NPIPA3F8WFD2 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
NPIPA3F8WFD2 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms