Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 MIR6837-201ENST00000620884 64 ntBASIC5.54□□□□□ -1.52
PCDHB1Q9Y5F3 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
PCDHB1Q9Y5F3 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.54□□□□□ -1.52
PCDHB1Q9Y5F3 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC5.54□□□□□ -1.52
PCDHB1Q9Y5F3 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.54□□□□□ -1.52
PCDHB1Q9Y5F3 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.54□□□□□ -1.52
PCDHB1Q9Y5F3 AC015799.1-201ENST00000622996 3122 ntBASIC5.54□□□□□ -1.52
PCDHB1Q9Y5F3 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PCDHB1Q9Y5F3 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.54□□□□□ -1.52
PCDHB1Q9Y5F3 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PCDHB1Q9Y5F3 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.53□□□□□ -1.52
PCDHB1Q9Y5F3 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.53□□□□□ -1.52
PCDHB1Q9Y5F3 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
PCDHB1Q9Y5F3 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.53□□□□□ -1.52
PCDHB1Q9Y5F3 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
PCDHB1Q9Y5F3 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
PCDHB1Q9Y5F3 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.53□□□□□ -1.52
PCDHB1Q9Y5F3 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
PCDHB1Q9Y5F3 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
PCDHB1Q9Y5F3 HMGB1P5-201ENST00000255320 642 ntBASIC5.53□□□□□ -1.52
PCDHB1Q9Y5F3 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
PCDHB1Q9Y5F3 TMSB4XP8-201ENST00000402089 135 ntBASIC5.53□□□□□ -1.52
PCDHB1Q9Y5F3 GAPDHP42-201ENST00000406848 981 ntBASIC5.53□□□□□ -1.52
PCDHB1Q9Y5F3 TEX41-202ENST00000414256 604 ntTSL 5 BASIC5.53□□□□□ -1.52
PCDHB1Q9Y5F3 TMSB4XP6-201ENST00000415187 135 ntBASIC5.53□□□□□ -1.52
PCDHB1Q9Y5F3 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC5.53□□□□□ -1.52
PCDHB1Q9Y5F3 PTP4A1P5-201ENST00000420305 455 ntBASIC5.53□□□□□ -1.52
PCDHB1Q9Y5F3 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.53□□□□□ -1.52
PCDHB1Q9Y5F3 GTF2IP23-201ENST00000423746 351 ntBASIC5.53□□□□□ -1.52
PCDHB1Q9Y5F3 TMSB4XP1-201ENST00000424567 135 ntBASIC5.53□□□□□ -1.52
PCDHB1Q9Y5F3 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC5.53□□□□□ -1.52
PCDHB1Q9Y5F3 DPRXP1-201ENST00000426312 460 ntBASIC5.53□□□□□ -1.52
PCDHB1Q9Y5F3 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.53□□□□□ -1.52
PCDHB1Q9Y5F3 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC5.53□□□□□ -1.52
PCDHB1Q9Y5F3 MTCO1P54-201ENST00000430139 712 ntBASIC5.53□□□□□ -1.52
PCDHB1Q9Y5F3 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC5.53□□□□□ -1.52
PCDHB1Q9Y5F3 AC092393.1-201ENST00000439625 742 ntBASIC5.53□□□□□ -1.52
PCDHB1Q9Y5F3 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC5.53□□□□□ -1.52
PCDHB1Q9Y5F3 RPS7P5-201ENST00000441482 581 ntBASIC5.53□□□□□ -1.52
PCDHB1Q9Y5F3 AL450996.1-201ENST00000445574 1202 ntBASIC5.53□□□□□ -1.52
PCDHB1Q9Y5F3 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC5.53□□□□□ -1.52
PCDHB1Q9Y5F3 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
PCDHB1Q9Y5F3 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC5.53□□□□□ -1.52
PCDHB1Q9Y5F3 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
PCDHB1Q9Y5F3 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC5.53□□□□□ -1.52
PCDHB1Q9Y5F3 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC5.53□□□□□ -1.52
PCDHB1Q9Y5F3 RN7SL172P-201ENST00000460535 303 ntBASIC5.53□□□□□ -1.52
PCDHB1Q9Y5F3 RPL23AP12-201ENST00000467573 473 ntBASIC5.53□□□□□ -1.52
PCDHB1Q9Y5F3 RN7SL329P-201ENST00000467740 299 ntBASIC5.53□□□□□ -1.52
PCDHB1Q9Y5F3 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC5.53□□□□□ -1.52
PCDHB1Q9Y5F3 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC5.53□□□□□ -1.52
PCDHB1Q9Y5F3 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC5.53□□□□□ -1.52
PCDHB1Q9Y5F3 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC5.53□□□□□ -1.52
PCDHB1Q9Y5F3 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC5.53□□□□□ -1.52
PCDHB1Q9Y5F3 AC116353.3-201ENST00000511215 249 ntBASIC5.53□□□□□ -1.52
PCDHB1Q9Y5F3 OR5BM1P-201ENST00000512021 366 ntBASIC5.53□□□□□ -1.52
PCDHB1Q9Y5F3 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC5.53□□□□□ -1.52
PCDHB1Q9Y5F3 CDC42P3-201ENST00000518493 633 ntBASIC5.53□□□□□ -1.52
PCDHB1Q9Y5F3 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC5.53□□□□□ -1.52
PCDHB1Q9Y5F3 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.53□□□□□ -1.52
PCDHB1Q9Y5F3 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
PCDHB1Q9Y5F3 ELOCP32-201ENST00000548625 324 ntBASIC5.53□□□□□ -1.52
PCDHB1Q9Y5F3 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC5.53□□□□□ -1.52
PCDHB1Q9Y5F3 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.53□□□□□ -1.52
PCDHB1Q9Y5F3 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.53□□□□□ -1.52
PCDHB1Q9Y5F3 AC015720.2-201ENST00000567709 334 ntBASIC5.53□□□□□ -1.52
PCDHB1Q9Y5F3 MTCYBP33-201ENST00000575007 1130 ntBASIC5.53□□□□□ -1.52
PCDHB1Q9Y5F3 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC5.53□□□□□ -1.52
PCDHB1Q9Y5F3 AC110760.3-201ENST00000598794 467 ntBASIC5.53□□□□□ -1.52
PCDHB1Q9Y5F3 AC011453.2-201ENST00000603737 729 ntBASIC5.53□□□□□ -1.52
PCDHB1Q9Y5F3 AL031281.1-201ENST00000604049 488 ntBASIC5.53□□□□□ -1.52
PCDHB1Q9Y5F3 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
PCDHB1Q9Y5F3 AC090116.1-201ENST00000615679 446 ntBASIC5.53□□□□□ -1.52
PCDHB1Q9Y5F3 uc_338.9-201ENST00000617424 182 ntBASIC5.53□□□□□ -1.52
PCDHB1Q9Y5F3 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
PCDHB1Q9Y5F3 AC016717.3-201ENST00000624730 554 ntBASIC5.53□□□□□ -1.52
PCDHB1Q9Y5F3 MIR4278-201ENST00000636094 69 ntBASIC5.53□□□□□ -1.52
PCDHB1Q9Y5F3 AC073869.7-201ENST00000640874 297 ntBASIC5.53□□□□□ -1.52
PCDHB1Q9Y5F3 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.53□□□□□ -1.52
PCDHB1Q9Y5F3 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
PCDHB1Q9Y5F3 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.53□□□□□ -1.52
PCDHB1Q9Y5F3 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
PCDHB1Q9Y5F3 AC025263.3-201ENST00000622965 1396 ntBASIC5.53□□□□□ -1.52
PCDHB1Q9Y5F3 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
PCDHB1Q9Y5F3 AC120338.1-201ENST00000625074 1541 ntBASIC5.53□□□□□ -1.52
PCDHB1Q9Y5F3 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
PCDHB1Q9Y5F3 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
PCDHB1Q9Y5F3 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
PCDHB1Q9Y5F3 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
PCDHB1Q9Y5F3 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
PCDHB1Q9Y5F3 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.52□□□□□ -1.53
PCDHB1Q9Y5F3 AC020633.1-201ENST00000468439 2247 ntBASIC5.52□□□□□ -1.53
PCDHB1Q9Y5F3 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.52□□□□□ -1.53
PCDHB1Q9Y5F3 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.52□□□□□ -1.53
PCDHB1Q9Y5F3 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
PCDHB1Q9Y5F3 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PCDHB1Q9Y5F3 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PCDHB1Q9Y5F3 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
PCDHB1Q9Y5F3 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PCDHB1Q9Y5F3 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 143.1 ms