Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 STX3-208ENST00000641815 3236 ntBASIC5.61□□□□□ -1.51
SSX2IPQ9Y2D8 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.61□□□□□ -1.51
SSX2IPQ9Y2D8 SNURFL-201ENST00000309296 343 ntBASIC5.61□□□□□ -1.51
SSX2IPQ9Y2D8 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
SSX2IPQ9Y2D8 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SSX2IPQ9Y2D8 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
SSX2IPQ9Y2D8 SNORD116-2-201ENST00000384274 95 ntBASIC5.61□□□□□ -1.51
SSX2IPQ9Y2D8 SNORD116-6-201ENST00000384711 96 ntBASIC5.61□□□□□ -1.51
SSX2IPQ9Y2D8 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
SSX2IPQ9Y2D8 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
SSX2IPQ9Y2D8 AL021331.1-201ENST00000402817 582 ntBASIC5.61□□□□□ -1.51
SSX2IPQ9Y2D8 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC5.61□□□□□ -1.51
SSX2IPQ9Y2D8 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC5.61□□□□□ -1.51
SSX2IPQ9Y2D8 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.61□□□□□ -1.51
SSX2IPQ9Y2D8 AC006065.1-201ENST00000422539 802 ntBASIC5.61□□□□□ -1.51
SSX2IPQ9Y2D8 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC5.61□□□□□ -1.51
SSX2IPQ9Y2D8 RPS4XP16-201ENST00000427198 791 ntBASIC5.61□□□□□ -1.51
SSX2IPQ9Y2D8 GTF2IP3-201ENST00000433887 494 ntBASIC5.61□□□□□ -1.51
SSX2IPQ9Y2D8 AL161722.2-201ENST00000434731 981 ntBASIC5.61□□□□□ -1.51
SSX2IPQ9Y2D8 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.61□□□□□ -1.51
SSX2IPQ9Y2D8 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.61□□□□□ -1.51
SSX2IPQ9Y2D8 SETD6P1-201ENST00000444575 317 ntBASIC5.61□□□□□ -1.51
SSX2IPQ9Y2D8 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.61□□□□□ -1.51
SSX2IPQ9Y2D8 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC5.61□□□□□ -1.51
SSX2IPQ9Y2D8 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC5.61□□□□□ -1.51
SSX2IPQ9Y2D8 CCNB1IP1P3-201ENST00000454702 829 ntBASIC5.61□□□□□ -1.51
SSX2IPQ9Y2D8 PTGES3P5-201ENST00000455109 434 ntBASIC5.61□□□□□ -1.51
SSX2IPQ9Y2D8 RPS29P22-201ENST00000472363 168 ntBASIC5.61□□□□□ -1.51
SSX2IPQ9Y2D8 AC079203.1-201ENST00000487972 404 ntBASIC5.61□□□□□ -1.51
SSX2IPQ9Y2D8 RPS27AP16-201ENST00000492222 470 ntBASIC5.61□□□□□ -1.51
SSX2IPQ9Y2D8 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC5.61□□□□□ -1.51
SSX2IPQ9Y2D8 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC5.61□□□□□ -1.51
SSX2IPQ9Y2D8 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC5.61□□□□□ -1.51
SSX2IPQ9Y2D8 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC5.61□□□□□ -1.51
SSX2IPQ9Y2D8 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC5.61□□□□□ -1.51
SSX2IPQ9Y2D8 AC011611.5-201ENST00000552477 578 ntBASIC5.61□□□□□ -1.51
SSX2IPQ9Y2D8 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
SSX2IPQ9Y2D8 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
SSX2IPQ9Y2D8 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
SSX2IPQ9Y2D8 MIR4480-201ENST00000582492 71 ntBASIC5.61□□□□□ -1.51
SSX2IPQ9Y2D8 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC5.61□□□□□ -1.51
SSX2IPQ9Y2D8 ZNF849P-201ENST00000594711 1566 ntBASIC5.61□□□□□ -1.51
SSX2IPQ9Y2D8 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC5.61□□□□□ -1.51
SSX2IPQ9Y2D8 AC004817.4-201ENST00000602396 3625 ntBASIC5.61□□□□□ -1.51
SSX2IPQ9Y2D8 AP002906.1-201ENST00000603405 233 ntBASIC5.61□□□□□ -1.51
SSX2IPQ9Y2D8 AC024060.1-201ENST00000607052 494 ntBASIC5.61□□□□□ -1.51
SSX2IPQ9Y2D8 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC5.61□□□□□ -1.51
SSX2IPQ9Y2D8 AC091304.6-201ENST00000619761 202 ntBASIC5.61□□□□□ -1.51
SSX2IPQ9Y2D8 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SSX2IPQ9Y2D8 AC006840.1-201ENST00000623069 542 ntBASIC5.61□□□□□ -1.51
SSX2IPQ9Y2D8 BANCR-201ENST00000624238 473 ntTSL 2 BASIC5.61□□□□□ -1.51
SSX2IPQ9Y2D8 AP003399.1-201ENST00000637534 361 ntBASIC5.61□□□□□ -1.51
SSX2IPQ9Y2D8 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SSX2IPQ9Y2D8 AC104964.3-201ENST00000606115 2860 ntBASIC5.61□□□□□ -1.51
SSX2IPQ9Y2D8 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SSX2IPQ9Y2D8 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.6□□□□□ -1.51
SSX2IPQ9Y2D8 MAPK10-263ENST00000641052 4307 ntBASIC5.6□□□□□ -1.51
SSX2IPQ9Y2D8 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SSX2IPQ9Y2D8 AC021242.1-201ENST00000507315 2035 ntBASIC5.6□□□□□ -1.51
SSX2IPQ9Y2D8 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.6□□□□□ -1.51
SSX2IPQ9Y2D8 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.6□□□□□ -1.51
SSX2IPQ9Y2D8 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SSX2IPQ9Y2D8 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SSX2IPQ9Y2D8 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SSX2IPQ9Y2D8 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SSX2IPQ9Y2D8 NXF4-202ENST00000416098 1465 ntBASIC5.6□□□□□ -1.51
SSX2IPQ9Y2D8 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SSX2IPQ9Y2D8 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.6□□□□□ -1.51
SSX2IPQ9Y2D8 NF1-214ENST00000490416 1329 ntTSL 3 BASIC5.6□□□□□ -1.51
SSX2IPQ9Y2D8 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
SSX2IPQ9Y2D8 RNU4-68P-201ENST00000364314 141 ntBASIC5.6□□□□□ -1.51
SSX2IPQ9Y2D8 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC5.6□□□□□ -1.51
SSX2IPQ9Y2D8 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
SSX2IPQ9Y2D8 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
SSX2IPQ9Y2D8 VDAC2P1-201ENST00000399358 958 ntBASIC5.6□□□□□ -1.51
SSX2IPQ9Y2D8 HMGB1P13-201ENST00000406019 642 ntBASIC5.6□□□□□ -1.51
SSX2IPQ9Y2D8 MIR1182-201ENST00000408363 97 ntBASIC5.6□□□□□ -1.51
SSX2IPQ9Y2D8 Y_RNA.625-201ENST00000411256 107 ntBASIC5.6□□□□□ -1.51
SSX2IPQ9Y2D8 HMGB1P49-201ENST00000418882 569 ntBASIC5.6□□□□□ -1.51
SSX2IPQ9Y2D8 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC5.6□□□□□ -1.51
SSX2IPQ9Y2D8 USP9YP11-201ENST00000427537 717 ntBASIC5.6□□□□□ -1.51
SSX2IPQ9Y2D8 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC5.6□□□□□ -1.51
SSX2IPQ9Y2D8 AC073465.2-201ENST00000440938 498 ntBASIC5.6□□□□□ -1.51
SSX2IPQ9Y2D8 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC5.6□□□□□ -1.51
SSX2IPQ9Y2D8 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.6□□□□□ -1.51
SSX2IPQ9Y2D8 OR6K5P-201ENST00000447050 945 ntBASIC5.6□□□□□ -1.51
SSX2IPQ9Y2D8 RPL31P44-201ENST00000447680 377 ntBASIC5.6□□□□□ -1.51
SSX2IPQ9Y2D8 AC004022.1-201ENST00000447766 1066 ntBASIC5.6□□□□□ -1.51
SSX2IPQ9Y2D8 AC092647.2-201ENST00000452998 253 ntBASIC5.6□□□□□ -1.51
SSX2IPQ9Y2D8 RPS3AP41-201ENST00000462701 778 ntBASIC5.6□□□□□ -1.51
SSX2IPQ9Y2D8 AC058823.1-201ENST00000485315 474 ntBASIC5.6□□□□□ -1.51
SSX2IPQ9Y2D8 AC083982.1-201ENST00000485679 344 ntBASIC5.6□□□□□ -1.51
SSX2IPQ9Y2D8 AC022133.1-201ENST00000490961 571 ntBASIC5.6□□□□□ -1.51
SSX2IPQ9Y2D8 RPS12P31-201ENST00000491419 398 ntBASIC5.6□□□□□ -1.51
SSX2IPQ9Y2D8 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC5.6□□□□□ -1.51
SSX2IPQ9Y2D8 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC5.6□□□□□ -1.51
SSX2IPQ9Y2D8 AC118465.1-201ENST00000513820 1271 ntBASIC5.6□□□□□ -1.51
SSX2IPQ9Y2D8 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC5.6□□□□□ -1.51
SSX2IPQ9Y2D8 AC022360.1-201ENST00000521058 340 ntBASIC5.6□□□□□ -1.51
SSX2IPQ9Y2D8 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms