Protein–RNA interactions for Protein: Q9UH17

APOBEC3B, DNA dC->dU-editing enzyme APOBEC-3B, humanhuman

Known RBP Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3BQ9UH17 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC4.49□□□□□ -1.69
APOBEC3BQ9UH17 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
APOBEC3BQ9UH17 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
APOBEC3BQ9UH17 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.49□□□□□ -1.69
APOBEC3BQ9UH17 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
APOBEC3BQ9UH17 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
APOBEC3BQ9UH17 AC135352.1-201ENST00000506173 1418 ntBASIC4.49□□□□□ -1.69
APOBEC3BQ9UH17 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
APOBEC3BQ9UH17 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.49□□□□□ -1.69
APOBEC3BQ9UH17 AL359922.3-201ENST00000624779 1670 ntBASIC4.49□□□□□ -1.69
APOBEC3BQ9UH17 DHX9P1-201ENST00000436565 3076 ntBASIC4.49□□□□□ -1.69
APOBEC3BQ9UH17 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
APOBEC3BQ9UH17 Y_RNA.62-201ENST00000362840 99 ntBASIC4.49□□□□□ -1.69
APOBEC3BQ9UH17 AC083799.1-201ENST00000366451 910 ntBASIC4.49□□□□□ -1.69
APOBEC3BQ9UH17 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC4.49□□□□□ -1.69
APOBEC3BQ9UH17 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
APOBEC3BQ9UH17 NPM1P10-201ENST00000398310 865 ntBASIC4.49□□□□□ -1.69
APOBEC3BQ9UH17 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC4.49□□□□□ -1.69
APOBEC3BQ9UH17 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
APOBEC3BQ9UH17 AL356967.1-201ENST00000406305 431 ntBASIC4.49□□□□□ -1.69
APOBEC3BQ9UH17 MTATP6P19-201ENST00000413797 659 ntBASIC4.49□□□□□ -1.69
APOBEC3BQ9UH17 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.49□□□□□ -1.69
APOBEC3BQ9UH17 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
APOBEC3BQ9UH17 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.49□□□□□ -1.69
APOBEC3BQ9UH17 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.49□□□□□ -1.69
APOBEC3BQ9UH17 RSL24D1P6-201ENST00000426934 401 ntBASIC4.49□□□□□ -1.69
APOBEC3BQ9UH17 RPL34P6-201ENST00000432390 345 ntBASIC4.49□□□□□ -1.69
APOBEC3BQ9UH17 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
APOBEC3BQ9UH17 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.49□□□□□ -1.69
APOBEC3BQ9UH17 EIF4A2P4-201ENST00000458691 1196 ntBASIC4.49□□□□□ -1.69
APOBEC3BQ9UH17 AC020890.1-201ENST00000491837 504 ntBASIC4.49□□□□□ -1.69
APOBEC3BQ9UH17 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.49□□□□□ -1.69
APOBEC3BQ9UH17 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC4.49□□□□□ -1.69
APOBEC3BQ9UH17 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.49□□□□□ -1.69
APOBEC3BQ9UH17 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC4.49□□□□□ -1.69
APOBEC3BQ9UH17 AC138701.1-201ENST00000524329 714 ntBASIC4.49□□□□□ -1.69
APOBEC3BQ9UH17 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC4.49□□□□□ -1.69
APOBEC3BQ9UH17 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
APOBEC3BQ9UH17 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.49□□□□□ -1.69
APOBEC3BQ9UH17 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.49□□□□□ -1.69
APOBEC3BQ9UH17 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.49□□□□□ -1.69
APOBEC3BQ9UH17 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC4.49□□□□□ -1.69
APOBEC3BQ9UH17 LINC01808-202ENST00000641680 1116 ntBASIC4.49□□□□□ -1.69
APOBEC3BQ9UH17 AC125257.1-201ENST00000560400 2930 ntBASIC4.49□□□□□ -1.69
APOBEC3BQ9UH17 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.49□□□□□ -1.69
APOBEC3BQ9UH17 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.49□□□□□ -1.69
APOBEC3BQ9UH17 MFSD8-242ENST00000641690 4199 ntBASIC4.49□□□□□ -1.69
APOBEC3BQ9UH17 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
APOBEC3BQ9UH17 AL391684.1-202ENST00000641293 1636 ntBASIC4.49□□□□□ -1.69
APOBEC3BQ9UH17 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
APOBEC3BQ9UH17 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.49□□□□□ -1.69
APOBEC3BQ9UH17 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
APOBEC3BQ9UH17 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.49□□□□□ -1.69
APOBEC3BQ9UH17 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
APOBEC3BQ9UH17 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.48□□□□□ -1.69
APOBEC3BQ9UH17 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
APOBEC3BQ9UH17 AC091046.3-201ENST00000631455 1574 ntBASIC4.48□□□□□ -1.69
APOBEC3BQ9UH17 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
APOBEC3BQ9UH17 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
APOBEC3BQ9UH17 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
APOBEC3BQ9UH17 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.48□□□□□ -1.69
APOBEC3BQ9UH17 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
APOBEC3BQ9UH17 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
APOBEC3BQ9UH17 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
APOBEC3BQ9UH17 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
APOBEC3BQ9UH17 OR4K17-201ENST00000315543 1032 ntBASIC4.48□□□□□ -1.69
APOBEC3BQ9UH17 ATP5F1P2-201ENST00000398143 760 ntBASIC4.48□□□□□ -1.69
APOBEC3BQ9UH17 AL592291.1-201ENST00000403830 352 ntBASIC4.48□□□□□ -1.69
APOBEC3BQ9UH17 AC234779.1-201ENST00000425910 285 ntBASIC4.48□□□□□ -1.69
APOBEC3BQ9UH17 RPS26P4-201ENST00000431743 355 ntBASIC4.48□□□□□ -1.69
APOBEC3BQ9UH17 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.48□□□□□ -1.69
APOBEC3BQ9UH17 FHP1-201ENST00000442741 703 ntBASIC4.48□□□□□ -1.69
APOBEC3BQ9UH17 TDGF1P1-201ENST00000445734 527 ntBASIC4.48□□□□□ -1.69
APOBEC3BQ9UH17 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.48□□□□□ -1.69
APOBEC3BQ9UH17 HMGN1P8-201ENST00000463578 288 ntBASIC4.48□□□□□ -1.69
APOBEC3BQ9UH17 PPIAP21-201ENST00000464473 501 ntBASIC4.48□□□□□ -1.69
APOBEC3BQ9UH17 RPL5P30-201ENST00000465511 891 ntBASIC4.48□□□□□ -1.69
APOBEC3BQ9UH17 AC103987.1-201ENST00000473394 348 ntBASIC4.48□□□□□ -1.69
APOBEC3BQ9UH17 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC4.48□□□□□ -1.69
APOBEC3BQ9UH17 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC4.48□□□□□ -1.69
APOBEC3BQ9UH17 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.48□□□□□ -1.69
APOBEC3BQ9UH17 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC4.48□□□□□ -1.69
APOBEC3BQ9UH17 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC4.48□□□□□ -1.69
APOBEC3BQ9UH17 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.48□□□□□ -1.69
APOBEC3BQ9UH17 AC233280.2-201ENST00000603917 1070 ntBASIC4.48□□□□□ -1.69
APOBEC3BQ9UH17 AC091979.2-201ENST00000607514 214 ntBASIC4.48□□□□□ -1.69
APOBEC3BQ9UH17 OR7M1P-201ENST00000608946 533 ntBASIC4.48□□□□□ -1.69
APOBEC3BQ9UH17 AL118556.2-201ENST00000614375 824 ntBASIC4.48□□□□□ -1.69
APOBEC3BQ9UH17 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.48□□□□□ -1.69
APOBEC3BQ9UH17 OR52H1-202ENST00000641796 1061 ntBASIC4.48□□□□□ -1.69
APOBEC3BQ9UH17 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.48□□□□□ -1.69
APOBEC3BQ9UH17 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
APOBEC3BQ9UH17 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
APOBEC3BQ9UH17 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
APOBEC3BQ9UH17 ASNSP1-201ENST00000518311 1939 ntBASIC4.48□□□□□ -1.69
APOBEC3BQ9UH17 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.48□□□□□ -1.69
APOBEC3BQ9UH17 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
APOBEC3BQ9UH17 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
APOBEC3BQ9UH17 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.47□□□□□ -1.69
APOBEC3BQ9UH17 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 121.1 ms