Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 AC231760.1-201ENST00000498002 260 ntBASIC4.15□□□□□ -1.75
VPS29Q9UBQ0 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.15□□□□□ -1.75
VPS29Q9UBQ0 AC021483.2-201ENST00000567415 758 ntBASIC4.15□□□□□ -1.75
VPS29Q9UBQ0 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC4.15□□□□□ -1.75
VPS29Q9UBQ0 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.15□□□□□ -1.75
VPS29Q9UBQ0 AC025175.1-201ENST00000606482 759 ntBASIC4.15□□□□□ -1.75
VPS29Q9UBQ0 Mico1.1-201ENST00000611698 204 ntBASIC4.15□□□□□ -1.75
VPS29Q9UBQ0 uc_338.13-201ENST00000618243 179 ntBASIC4.15□□□□□ -1.75
VPS29Q9UBQ0 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC4.15□□□□□ -1.75
VPS29Q9UBQ0 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
VPS29Q9UBQ0 VPS35P1-201ENST00000563400 1518 ntBASIC4.15□□□□□ -1.75
VPS29Q9UBQ0 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
VPS29Q9UBQ0 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
VPS29Q9UBQ0 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.75
VPS29Q9UBQ0 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
VPS29Q9UBQ0 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
VPS29Q9UBQ0 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC4.14□□□□□ -1.75
VPS29Q9UBQ0 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
VPS29Q9UBQ0 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
VPS29Q9UBQ0 SNORA11F-201ENST00000408237 128 ntBASIC4.14□□□□□ -1.75
VPS29Q9UBQ0 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.14□□□□□ -1.75
VPS29Q9UBQ0 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.14□□□□□ -1.75
VPS29Q9UBQ0 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC4.14□□□□□ -1.75
VPS29Q9UBQ0 AL590139.1-201ENST00000416267 400 ntBASIC4.14□□□□□ -1.75
VPS29Q9UBQ0 AL161631.1-201ENST00000417933 486 ntBASIC4.14□□□□□ -1.75
VPS29Q9UBQ0 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.14□□□□□ -1.75
VPS29Q9UBQ0 BRWD1P3-201ENST00000428816 390 ntBASIC4.14□□□□□ -1.75
VPS29Q9UBQ0 HMGB3P10-201ENST00000434734 572 ntBASIC4.14□□□□□ -1.75
VPS29Q9UBQ0 HLA-N-201ENST00000437516 135 ntBASIC4.14□□□□□ -1.75
VPS29Q9UBQ0 AC016687.1-201ENST00000482574 353 ntBASIC4.14□□□□□ -1.75
VPS29Q9UBQ0 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
VPS29Q9UBQ0 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
VPS29Q9UBQ0 RNA5SP228-201ENST00000516232 133 ntBASIC4.14□□□□□ -1.75
VPS29Q9UBQ0 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
VPS29Q9UBQ0 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC4.14□□□□□ -1.75
VPS29Q9UBQ0 AC125612.1-201ENST00000547580 377 ntBASIC4.14□□□□□ -1.75
VPS29Q9UBQ0 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC4.14□□□□□ -1.75
VPS29Q9UBQ0 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC4.14□□□□□ -1.75
VPS29Q9UBQ0 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.14□□□□□ -1.75
VPS29Q9UBQ0 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC4.14□□□□□ -1.75
VPS29Q9UBQ0 RPL26P30-202ENST00000602923 645 ntBASIC4.14□□□□□ -1.75
VPS29Q9UBQ0 AC093765.1-201ENST00000603758 881 ntBASIC4.14□□□□□ -1.75
VPS29Q9UBQ0 AC023813.4-201ENST00000607580 580 ntBASIC4.14□□□□□ -1.75
VPS29Q9UBQ0 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.14□□□□□ -1.75
VPS29Q9UBQ0 AC010300.1-201ENST00000600671 5134 ntBASIC4.14□□□□□ -1.75
VPS29Q9UBQ0 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.14□□□□□ -1.75
VPS29Q9UBQ0 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.14□□□□□ -1.75
VPS29Q9UBQ0 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
VPS29Q9UBQ0 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
VPS29Q9UBQ0 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC4.14□□□□□ -1.75
VPS29Q9UBQ0 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.14□□□□□ -1.75
VPS29Q9UBQ0 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
VPS29Q9UBQ0 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
VPS29Q9UBQ0 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
VPS29Q9UBQ0 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
VPS29Q9UBQ0 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
VPS29Q9UBQ0 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.14□□□□□ -1.75
VPS29Q9UBQ0 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
VPS29Q9UBQ0 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.13□□□□□ -1.75
VPS29Q9UBQ0 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.13□□□□□ -1.75
VPS29Q9UBQ0 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
VPS29Q9UBQ0 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.13□□□□□ -1.75
VPS29Q9UBQ0 MIR331-201ENST00000362302 94 ntBASIC4.13□□□□□ -1.75
VPS29Q9UBQ0 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
VPS29Q9UBQ0 MIR129-1-201ENST00000384972 72 ntBASIC4.13□□□□□ -1.75
VPS29Q9UBQ0 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
VPS29Q9UBQ0 RPL23AP1-201ENST00000428990 471 ntBASIC4.13□□□□□ -1.75
VPS29Q9UBQ0 NFYAP1-201ENST00000431953 972 ntBASIC4.13□□□□□ -1.75
VPS29Q9UBQ0 AC011998.1-201ENST00000433403 117 ntBASIC4.13□□□□□ -1.75
VPS29Q9UBQ0 CEACAMP1-201ENST00000434624 1035 ntBASIC4.13□□□□□ -1.75
VPS29Q9UBQ0 FTH1P16-201ENST00000435241 552 ntBASIC4.13□□□□□ -1.75
VPS29Q9UBQ0 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.13□□□□□ -1.75
VPS29Q9UBQ0 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC4.13□□□□□ -1.75
VPS29Q9UBQ0 RPL23AP72-201ENST00000492447 435 ntBASIC4.13□□□□□ -1.75
VPS29Q9UBQ0 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.13□□□□□ -1.75
VPS29Q9UBQ0 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.13□□□□□ -1.75
VPS29Q9UBQ0 RN7SKP92-201ENST00000517266 244 ntBASIC4.13□□□□□ -1.75
VPS29Q9UBQ0 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
VPS29Q9UBQ0 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC4.13□□□□□ -1.75
VPS29Q9UBQ0 AC006064.5-201ENST00000541782 248 ntBASIC4.13□□□□□ -1.75
VPS29Q9UBQ0 AC063949.1-201ENST00000552900 865 ntBASIC4.13□□□□□ -1.75
VPS29Q9UBQ0 AL109766.1-201ENST00000555080 552 ntBASIC4.13□□□□□ -1.75
VPS29Q9UBQ0 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.13□□□□□ -1.75
VPS29Q9UBQ0 AC011270.1-201ENST00000558606 583 ntBASIC4.13□□□□□ -1.75
VPS29Q9UBQ0 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC4.13□□□□□ -1.75
VPS29Q9UBQ0 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.13□□□□□ -1.75
VPS29Q9UBQ0 AL031666.3-201ENST00000609320 1006 ntBASIC4.13□□□□□ -1.75
VPS29Q9UBQ0 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
VPS29Q9UBQ0 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
VPS29Q9UBQ0 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.13□□□□□ -1.75
VPS29Q9UBQ0 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.13□□□□□ -1.75
VPS29Q9UBQ0 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.13□□□□□ -1.75
VPS29Q9UBQ0 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
VPS29Q9UBQ0 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.13□□□□□ -1.75
VPS29Q9UBQ0 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
VPS29Q9UBQ0 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.13□□□□□ -1.75
VPS29Q9UBQ0 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
VPS29Q9UBQ0 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
VPS29Q9UBQ0 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.12□□□□□ -1.75
VPS29Q9UBQ0 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms