Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
SSU72Q9NP77 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SSU72Q9NP77 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SSU72Q9NP77 RNU6-462P-201ENST00000362659 105 ntBASIC6.17□□□□□ -1.42
SSU72Q9NP77 RN7SKP191-201ENST00000364713 306 ntBASIC6.17□□□□□ -1.42
SSU72Q9NP77 Y_RNA.279-201ENST00000364763 95 ntBASIC6.17□□□□□ -1.42
SSU72Q9NP77 RNA5SP427-201ENST00000365323 119 ntBASIC6.17□□□□□ -1.42
SSU72Q9NP77 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC6.17□□□□□ -1.42
SSU72Q9NP77 RNU6-692P-201ENST00000384496 107 ntBASIC6.17□□□□□ -1.42
SSU72Q9NP77 Y_RNA.529-201ENST00000384586 119 ntBASIC6.17□□□□□ -1.42
SSU72Q9NP77 Y_RNA.573-201ENST00000384763 105 ntBASIC6.17□□□□□ -1.42
SSU72Q9NP77 AL356776.1-201ENST00000406574 447 ntBASIC6.17□□□□□ -1.42
SSU72Q9NP77 RNA5SP498-201ENST00000411342 120 ntBASIC6.17□□□□□ -1.42
SSU72Q9NP77 AC245096.1-201ENST00000413104 546 ntBASIC6.17□□□□□ -1.42
SSU72Q9NP77 AL450992.3-201ENST00000413192 568 ntBASIC6.17□□□□□ -1.42
SSU72Q9NP77 AL583805.2-201ENST00000418571 486 ntTSL 5 BASIC6.17□□□□□ -1.42
SSU72Q9NP77 AL590095.1-201ENST00000420049 436 ntTSL 3 BASIC6.17□□□□□ -1.42
SSU72Q9NP77 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
SSU72Q9NP77 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC6.17□□□□□ -1.42
SSU72Q9NP77 GRM7-AS2-201ENST00000427748 520 ntTSL 2 BASIC6.17□□□□□ -1.42
SSU72Q9NP77 NPM1P22-201ENST00000427761 952 ntBASIC6.17□□□□□ -1.42
SSU72Q9NP77 AL358934.1-201ENST00000432346 324 ntBASIC6.17□□□□□ -1.42
SSU72Q9NP77 AC012485.2-201ENST00000437372 982 ntTSL 5 BASIC6.17□□□□□ -1.42
SSU72Q9NP77 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC6.17□□□□□ -1.42
SSU72Q9NP77 AC092421.1-201ENST00000448148 418 ntBASIC6.17□□□□□ -1.42
SSU72Q9NP77 AC147651.1-201ENST00000453149 572 ntTSL 2 BASIC6.17□□□□□ -1.42
SSU72Q9NP77 Z83838.1-202ENST00000456225 839 ntBASIC6.17□□□□□ -1.42
SSU72Q9NP77 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC6.17□□□□□ -1.42
SSU72Q9NP77 RN7SL352P-201ENST00000466002 277 ntBASIC6.17□□□□□ -1.42
SSU72Q9NP77 UCK2-205ENST00000469256 753 ntTSL 3 BASIC6.17□□□□□ -1.42
SSU72Q9NP77 RN7SL643P-201ENST00000471845 291 ntBASIC6.17□□□□□ -1.42
SSU72Q9NP77 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC6.17□□□□□ -1.42
SSU72Q9NP77 PPP1R11P1-201ENST00000486095 376 ntBASIC6.17□□□□□ -1.42
SSU72Q9NP77 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC6.17□□□□□ -1.42
SSU72Q9NP77 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SSU72Q9NP77 AC111193.1-201ENST00000504097 155 ntBASIC6.17□□□□□ -1.42
SSU72Q9NP77 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC6.17□□□□□ -1.42
SSU72Q9NP77 AC098799.3-201ENST00000506095 438 ntBASIC6.17□□□□□ -1.42
SSU72Q9NP77 OR5M14P-201ENST00000506803 618 ntBASIC6.17□□□□□ -1.42
SSU72Q9NP77 AC106872.4-201ENST00000510050 523 ntBASIC6.17□□□□□ -1.42
SSU72Q9NP77 AC026412.2-201ENST00000512270 1075 ntBASIC6.17□□□□□ -1.42
SSU72Q9NP77 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC6.17□□□□□ -1.42
SSU72Q9NP77 AF235103.2-201ENST00000525753 346 ntBASIC6.17□□□□□ -1.42
SSU72Q9NP77 RGS5-218ENST00000526176 574 ntTSL 4 BASIC6.17□□□□□ -1.42
SSU72Q9NP77 AC022878.1-201ENST00000530684 149 ntBASIC6.17□□□□□ -1.42
SSU72Q9NP77 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC6.17□□□□□ -1.42
SSU72Q9NP77 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC6.17□□□□□ -1.42
SSU72Q9NP77 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC6.17□□□□□ -1.42
SSU72Q9NP77 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC6.17□□□□□ -1.42
SSU72Q9NP77 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC6.17□□□□□ -1.42
SSU72Q9NP77 AC022432.1-201ENST00000595739 310 ntBASIC6.17□□□□□ -1.42
SSU72Q9NP77 RPS11-205ENST00000599561 430 ntTSL 5 BASIC6.17□□□□□ -1.42
SSU72Q9NP77 XIST-210ENST00000602863 775 ntTSL 3 BASIC6.17□□□□□ -1.42
SSU72Q9NP77 AC112191.3-201ENST00000604371 277 ntBASIC6.17□□□□□ -1.42
SSU72Q9NP77 AL009028.1-201ENST00000604895 802 ntBASIC6.17□□□□□ -1.42
SSU72Q9NP77 AC103710.4-201ENST00000609301 899 ntBASIC6.17□□□□□ -1.42
SSU72Q9NP77 AL137000.1-201ENST00000610528 1244 ntBASIC6.17□□□□□ -1.42
SSU72Q9NP77 AL137067.2-201ENST00000621202 131 ntBASIC6.17□□□□□ -1.42
SSU72Q9NP77 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC6.17□□□□□ -1.42
SSU72Q9NP77 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SSU72Q9NP77 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC6.17□□□□□ -1.42
SSU72Q9NP77 AC005224.3-201ENST00000584683 2140 ntBASIC6.17□□□□□ -1.42
SSU72Q9NP77 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC6.17□□□□□ -1.42
SSU72Q9NP77 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC6.17□□□□□ -1.42
SSU72Q9NP77 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC6.17□□□□□ -1.42
SSU72Q9NP77 AC016583.1-201ENST00000624221 2431 ntBASIC6.17□□□□□ -1.42
SSU72Q9NP77 BX284613.1-201ENST00000452221 1641 ntBASIC6.17□□□□□ -1.42
SSU72Q9NP77 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SSU72Q9NP77 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
SSU72Q9NP77 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
SSU72Q9NP77 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
SSU72Q9NP77 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SSU72Q9NP77 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SSU72Q9NP77 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SSU72Q9NP77 AC140134.1-201ENST00000511830 3544 ntBASIC6.16□□□□□ -1.42
SSU72Q9NP77 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC6.16□□□□□ -1.42
SSU72Q9NP77 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SSU72Q9NP77 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SSU72Q9NP77 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
SSU72Q9NP77 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SSU72Q9NP77 SNORA43.1-201ENST00000364863 140 ntBASIC6.16□□□□□ -1.42
SSU72Q9NP77 TINAG-202ENST00000370864 692 ntTSL 2 BASIC6.16□□□□□ -1.42
SSU72Q9NP77 CUBN-201ENST00000377823 705 ntTSL 3 BASIC6.16□□□□□ -1.42
SSU72Q9NP77 Y_RNA.409-201ENST00000383990 98 ntBASIC6.16□□□□□ -1.42
SSU72Q9NP77 RNU4-55P-201ENST00000410731 137 ntBASIC6.16□□□□□ -1.42
SSU72Q9NP77 AMD1P2-201ENST00000412936 992 ntBASIC6.16□□□□□ -1.42
SSU72Q9NP77 FCF1P2-201ENST00000415284 583 ntBASIC6.16□□□□□ -1.42
SSU72Q9NP77 RPS3AP9-201ENST00000417027 792 ntBASIC6.16□□□□□ -1.42
SSU72Q9NP77 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC6.16□□□□□ -1.42
SSU72Q9NP77 AL953862.1-201ENST00000423016 168 ntBASIC6.16□□□□□ -1.42
SSU72Q9NP77 RPL23AP4-201ENST00000427757 463 ntBASIC6.16□□□□□ -1.42
SSU72Q9NP77 HSPD1P12-201ENST00000429127 1069 ntBASIC6.16□□□□□ -1.42
SSU72Q9NP77 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC6.16□□□□□ -1.42
SSU72Q9NP77 RPL7P59-201ENST00000447700 943 ntBASIC6.16□□□□□ -1.42
SSU72Q9NP77 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC6.16□□□□□ -1.42
SSU72Q9NP77 RPS20P24-201ENST00000457473 361 ntBASIC6.16□□□□□ -1.42
SSU72Q9NP77 RPS4XP19-201ENST00000460237 736 ntBASIC6.16□□□□□ -1.42
SSU72Q9NP77 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC6.16□□□□□ -1.42
SSU72Q9NP77 HMGB1P29-201ENST00000505659 499 ntBASIC6.16□□□□□ -1.42
SSU72Q9NP77 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms