Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC3.12□□□□□ -1.91
SND1-IT1Q9HBX3 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
SND1-IT1Q9HBX3 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
SND1-IT1Q9HBX3 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.12□□□□□ -1.91
SND1-IT1Q9HBX3 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC3.11□□□□□ -1.91
SND1-IT1Q9HBX3 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC3.11□□□□□ -1.91
SND1-IT1Q9HBX3 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
SND1-IT1Q9HBX3 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
SND1-IT1Q9HBX3 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
SND1-IT1Q9HBX3 KPNA2P2-201ENST00000419546 1489 ntBASIC3.11□□□□□ -1.91
SND1-IT1Q9HBX3 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
SND1-IT1Q9HBX3 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
SND1-IT1Q9HBX3 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
SND1-IT1Q9HBX3 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
SND1-IT1Q9HBX3 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
SND1-IT1Q9HBX3 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
SND1-IT1Q9HBX3 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
SND1-IT1Q9HBX3 U3.2-201ENST00000362981 210 ntBASIC3.11□□□□□ -1.91
SND1-IT1Q9HBX3 RN7SKP115-201ENST00000363177 317 ntBASIC3.11□□□□□ -1.91
SND1-IT1Q9HBX3 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC3.11□□□□□ -1.91
SND1-IT1Q9HBX3 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
SND1-IT1Q9HBX3 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
SND1-IT1Q9HBX3 RNU6-1279P-201ENST00000383917 103 ntBASIC3.11□□□□□ -1.91
SND1-IT1Q9HBX3 AL160275.2-201ENST00000412010 394 ntBASIC3.11□□□□□ -1.91
SND1-IT1Q9HBX3 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC3.11□□□□□ -1.91
SND1-IT1Q9HBX3 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC3.11□□□□□ -1.91
SND1-IT1Q9HBX3 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC3.11□□□□□ -1.91
SND1-IT1Q9HBX3 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC3.11□□□□□ -1.91
SND1-IT1Q9HBX3 RPL23AP25-201ENST00000430973 463 ntBASIC3.11□□□□□ -1.91
SND1-IT1Q9HBX3 TRAPPC2P9-201ENST00000434556 343 ntBASIC3.11□□□□□ -1.91
SND1-IT1Q9HBX3 RPL34P20-201ENST00000442771 351 ntBASIC3.11□□□□□ -1.91
SND1-IT1Q9HBX3 SPRYD7P1-201ENST00000443861 570 ntBASIC3.11□□□□□ -1.91
SND1-IT1Q9HBX3 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC3.11□□□□□ -1.91
SND1-IT1Q9HBX3 AL645937.3-201ENST00000453647 936 ntBASIC3.11□□□□□ -1.91
SND1-IT1Q9HBX3 AC010469.1-201ENST00000463864 576 ntBASIC3.11□□□□□ -1.91
SND1-IT1Q9HBX3 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC3.11□□□□□ -1.91
SND1-IT1Q9HBX3 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC3.11□□□□□ -1.91
SND1-IT1Q9HBX3 RN7SL319P-201ENST00000480656 221 ntBASIC3.11□□□□□ -1.91
SND1-IT1Q9HBX3 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC3.11□□□□□ -1.91
SND1-IT1Q9HBX3 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC3.11□□□□□ -1.91
SND1-IT1Q9HBX3 AC025459.1-201ENST00000504072 156 ntBASIC3.11□□□□□ -1.91
SND1-IT1Q9HBX3 PGAM1P13-201ENST00000507497 754 ntBASIC3.11□□□□□ -1.91
SND1-IT1Q9HBX3 SSX6-203ENST00000509958 336 ntTSL 3 BASIC3.11□□□□□ -1.91
SND1-IT1Q9HBX3 BX510359.5-201ENST00000515651 304 ntBASIC3.11□□□□□ -1.91
SND1-IT1Q9HBX3 RN7SKP70-201ENST00000516655 271 ntBASIC3.11□□□□□ -1.91
SND1-IT1Q9HBX3 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC3.11□□□□□ -1.91
SND1-IT1Q9HBX3 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC3.11□□□□□ -1.91
SND1-IT1Q9HBX3 AC008694.2-201ENST00000517591 306 ntBASIC3.11□□□□□ -1.91
SND1-IT1Q9HBX3 TBCA-203ENST00000517679 545 ntTSL 3 BASIC3.11□□□□□ -1.91
SND1-IT1Q9HBX3 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC3.11□□□□□ -1.91
SND1-IT1Q9HBX3 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC3.11□□□□□ -1.91
SND1-IT1Q9HBX3 AC090151.1-201ENST00000520784 730 ntBASIC3.11□□□□□ -1.91
SND1-IT1Q9HBX3 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC3.11□□□□□ -1.91
SND1-IT1Q9HBX3 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC3.11□□□□□ -1.91
SND1-IT1Q9HBX3 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC3.11□□□□□ -1.91
SND1-IT1Q9HBX3 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC3.11□□□□□ -1.91
SND1-IT1Q9HBX3 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC3.11□□□□□ -1.91
SND1-IT1Q9HBX3 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC3.11□□□□□ -1.91
SND1-IT1Q9HBX3 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC3.11□□□□□ -1.91
SND1-IT1Q9HBX3 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC3.11□□□□□ -1.91
SND1-IT1Q9HBX3 AC063949.1-201ENST00000552900 865 ntBASIC3.11□□□□□ -1.91
SND1-IT1Q9HBX3 AL161713.1-201ENST00000555538 145 ntBASIC3.11□□□□□ -1.91
SND1-IT1Q9HBX3 AC093249.4-201ENST00000564755 259 ntBASIC3.11□□□□□ -1.91
SND1-IT1Q9HBX3 AC209154.1-201ENST00000582156 337 ntBASIC3.11□□□□□ -1.91
SND1-IT1Q9HBX3 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC3.11□□□□□ -1.91
SND1-IT1Q9HBX3 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC3.11□□□□□ -1.91
SND1-IT1Q9HBX3 AC079395.2-201ENST00000610982 737 ntBASIC3.11□□□□□ -1.91
SND1-IT1Q9HBX3 AL591926.8-201ENST00000616876 211 ntBASIC3.11□□□□□ -1.91
SND1-IT1Q9HBX3 AC067852.7-201ENST00000623270 535 ntBASIC3.11□□□□□ -1.91
SND1-IT1Q9HBX3 AC020763.5-201ENST00000623298 430 ntBASIC3.11□□□□□ -1.91
SND1-IT1Q9HBX3 AP002505.2-201ENST00000623585 696 ntBASIC3.11□□□□□ -1.91
SND1-IT1Q9HBX3 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC3.11□□□□□ -1.91
SND1-IT1Q9HBX3 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC3.11□□□□□ -1.91
SND1-IT1Q9HBX3 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
SND1-IT1Q9HBX3 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
SND1-IT1Q9HBX3 CASC19-264ENST00000641912 1184 ntBASIC3.11□□□□□ -1.91
SND1-IT1Q9HBX3 SUPT16HP1-201ENST00000537175 3133 ntBASIC3.11□□□□□ -1.91
SND1-IT1Q9HBX3 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC3.11□□□□□ -1.91
SND1-IT1Q9HBX3 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
SND1-IT1Q9HBX3 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
SND1-IT1Q9HBX3 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
SND1-IT1Q9HBX3 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
SND1-IT1Q9HBX3 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC3.11□□□□□ -1.91
SND1-IT1Q9HBX3 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
SND1-IT1Q9HBX3 USP9YP4-201ENST00000424401 1745 ntBASIC3.1□□□□□ -1.91
SND1-IT1Q9HBX3 TLK1P1-201ENST00000456760 2440 ntBASIC3.1□□□□□ -1.91
SND1-IT1Q9HBX3 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
SND1-IT1Q9HBX3 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
SND1-IT1Q9HBX3 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
SND1-IT1Q9HBX3 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC3.1□□□□□ -1.91
SND1-IT1Q9HBX3 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
SND1-IT1Q9HBX3 AL031985.1-201ENST00000392713 418 ntBASIC3.1□□□□□ -1.91
SND1-IT1Q9HBX3 AL589647.1-201ENST00000402485 466 ntBASIC3.1□□□□□ -1.91
SND1-IT1Q9HBX3 Z86062.1-201ENST00000406773 777 ntBASIC3.1□□□□□ -1.91
SND1-IT1Q9HBX3 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC3.1□□□□□ -1.91
SND1-IT1Q9HBX3 RNA5SP104-201ENST00000410989 118 ntBASIC3.1□□□□□ -1.91
SND1-IT1Q9HBX3 RPL35AP24-201ENST00000413846 330 ntBASIC3.1□□□□□ -1.91
SND1-IT1Q9HBX3 AL691447.1-201ENST00000419456 387 ntBASIC3.1□□□□□ -1.91
SND1-IT1Q9HBX3 RPL7P57-201ENST00000423238 740 ntBASIC3.1□□□□□ -1.91
SND1-IT1Q9HBX3 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 141.1 ms