Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SEC61A2Q9H9S3 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
SEC61A2Q9H9S3 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.38□□□□□ -1.55
SEC61A2Q9H9S3 AC103591.2-201ENST00000265259 766 ntBASIC5.38□□□□□ -1.55
SEC61A2Q9H9S3 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
SEC61A2Q9H9S3 RNU6-452P-201ENST00000384406 107 ntBASIC5.38□□□□□ -1.55
SEC61A2Q9H9S3 U3.23-201ENST00000391132 200 ntBASIC5.38□□□□□ -1.55
SEC61A2Q9H9S3 MIR1277-201ENST00000408536 78 ntBASIC5.38□□□□□ -1.55
SEC61A2Q9H9S3 AP000357.1-201ENST00000409926 1165 ntBASIC5.38□□□□□ -1.55
SEC61A2Q9H9S3 RNU2-42P-201ENST00000410697 113 ntBASIC5.38□□□□□ -1.55
SEC61A2Q9H9S3 AC015977.1-201ENST00000418887 292 ntBASIC5.38□□□□□ -1.55
SEC61A2Q9H9S3 PTP4A1P1-201ENST00000420539 515 ntBASIC5.38□□□□□ -1.55
SEC61A2Q9H9S3 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC5.38□□□□□ -1.55
SEC61A2Q9H9S3 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC5.38□□□□□ -1.55
SEC61A2Q9H9S3 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC5.38□□□□□ -1.55
SEC61A2Q9H9S3 AL050321.1-201ENST00000432363 400 ntBASIC5.38□□□□□ -1.55
SEC61A2Q9H9S3 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC5.38□□□□□ -1.55
SEC61A2Q9H9S3 PNKDP1-201ENST00000435914 430 ntBASIC5.38□□□□□ -1.55
SEC61A2Q9H9S3 AL138899.2-201ENST00000439139 499 ntBASIC5.38□□□□□ -1.55
SEC61A2Q9H9S3 DNAJC19P4-201ENST00000440115 345 ntBASIC5.38□□□□□ -1.55
SEC61A2Q9H9S3 AL353093.1-201ENST00000441292 436 ntBASIC5.38□□□□□ -1.55
SEC61A2Q9H9S3 VN1R10P-201ENST00000447106 875 ntBASIC5.38□□□□□ -1.55
SEC61A2Q9H9S3 Z99127.3-201ENST00000448158 395 ntBASIC5.38□□□□□ -1.55
SEC61A2Q9H9S3 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC5.38□□□□□ -1.55
SEC61A2Q9H9S3 PPIAP7-201ENST00000454070 489 ntBASIC5.38□□□□□ -1.55
SEC61A2Q9H9S3 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC5.38□□□□□ -1.55
SEC61A2Q9H9S3 Z83838.1-202ENST00000456225 839 ntBASIC5.38□□□□□ -1.55
SEC61A2Q9H9S3 OR5H5P-201ENST00000503164 928 ntBASIC5.38□□□□□ -1.55
SEC61A2Q9H9S3 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SEC61A2Q9H9S3 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC5.38□□□□□ -1.55
SEC61A2Q9H9S3 RNU6-1225P-201ENST00000516336 65 ntBASIC5.38□□□□□ -1.55
SEC61A2Q9H9S3 IGKV3D-25-201ENST00000519599 235 ntBASIC5.38□□□□□ -1.55
SEC61A2Q9H9S3 AP000620.1-201ENST00000527147 504 ntBASIC5.38□□□□□ -1.55
SEC61A2Q9H9S3 AC104383.1-201ENST00000530297 370 ntBASIC5.38□□□□□ -1.55
SEC61A2Q9H9S3 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC5.38□□□□□ -1.55
SEC61A2Q9H9S3 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.38□□□□□ -1.55
SEC61A2Q9H9S3 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC5.38□□□□□ -1.55
SEC61A2Q9H9S3 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC5.38□□□□□ -1.55
SEC61A2Q9H9S3 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC5.38□□□□□ -1.55
SEC61A2Q9H9S3 MIR4666A-201ENST00000580160 79 ntBASIC5.38□□□□□ -1.55
SEC61A2Q9H9S3 AC005730.3-201ENST00000583067 366 ntBASIC5.38□□□□□ -1.55
SEC61A2Q9H9S3 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
SEC61A2Q9H9S3 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC5.38□□□□□ -1.55
SEC61A2Q9H9S3 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC5.38□□□□□ -1.55
SEC61A2Q9H9S3 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.38□□□□□ -1.55
SEC61A2Q9H9S3 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC5.38□□□□□ -1.55
SEC61A2Q9H9S3 AC133552.5-201ENST00000604266 540 ntBASIC5.38□□□□□ -1.55
SEC61A2Q9H9S3 AL390816.3-201ENST00000604527 1066 ntBASIC5.38□□□□□ -1.55
SEC61A2Q9H9S3 AP000860.1-201ENST00000605250 559 ntBASIC5.38□□□□□ -1.55
SEC61A2Q9H9S3 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
SEC61A2Q9H9S3 AC069234.4-201ENST00000621276 412 ntBASIC5.38□□□□□ -1.55
SEC61A2Q9H9S3 AC004009.2-201ENST00000623016 728 ntBASIC5.38□□□□□ -1.55
SEC61A2Q9H9S3 AC099654.5-201ENST00000636479 350 ntBASIC5.38□□□□□ -1.55
SEC61A2Q9H9S3 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC5.38□□□□□ -1.55
SEC61A2Q9H9S3 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SEC61A2Q9H9S3 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
SEC61A2Q9H9S3 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SEC61A2Q9H9S3 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
SEC61A2Q9H9S3 MTND4P23-201ENST00000447723 1363 ntBASIC5.38□□□□□ -1.55
SEC61A2Q9H9S3 AL161912.4-201ENST00000623889 2468 ntBASIC5.38□□□□□ -1.55
SEC61A2Q9H9S3 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
SEC61A2Q9H9S3 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SEC61A2Q9H9S3 Z99496.1-201ENST00000469424 1477 ntBASIC5.38□□□□□ -1.55
SEC61A2Q9H9S3 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
SEC61A2Q9H9S3 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SEC61A2Q9H9S3 AC022325.1-201ENST00000502748 2199 ntBASIC5.38□□□□□ -1.55
SEC61A2Q9H9S3 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
SEC61A2Q9H9S3 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SEC61A2Q9H9S3 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
SEC61A2Q9H9S3 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC5.37□□□□□ -1.55
SEC61A2Q9H9S3 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC5.37□□□□□ -1.55
SEC61A2Q9H9S3 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
SEC61A2Q9H9S3 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SEC61A2Q9H9S3 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
SEC61A2Q9H9S3 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SEC61A2Q9H9S3 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.37□□□□□ -1.55
SEC61A2Q9H9S3 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SEC61A2Q9H9S3 OR9G4-201ENST00000302957 984 ntBASIC5.37□□□□□ -1.55
SEC61A2Q9H9S3 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
SEC61A2Q9H9S3 OR10R3P-201ENST00000361688 942 ntBASIC5.37□□□□□ -1.55
SEC61A2Q9H9S3 Y_RNA.61-201ENST00000362835 102 ntBASIC5.37□□□□□ -1.55
SEC61A2Q9H9S3 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.37□□□□□ -1.55
SEC61A2Q9H9S3 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC5.37□□□□□ -1.55
SEC61A2Q9H9S3 SNORA51.9-201ENST00000384295 124 ntBASIC5.37□□□□□ -1.55
SEC61A2Q9H9S3 MIR130B-202ENST00000385018 82 ntBASIC5.37□□□□□ -1.55
SEC61A2Q9H9S3 AL096800.1-201ENST00000405326 893 ntBASIC5.37□□□□□ -1.55
SEC61A2Q9H9S3 SNORA11.5-201ENST00000408163 128 ntBASIC5.37□□□□□ -1.55
SEC61A2Q9H9S3 SNORA77.2-201ENST00000408571 112 ntBASIC5.37□□□□□ -1.55
SEC61A2Q9H9S3 AL096829.1-201ENST00000413677 457 ntBASIC5.37□□□□□ -1.55
SEC61A2Q9H9S3 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC5.37□□□□□ -1.55
SEC61A2Q9H9S3 AC009237.5-201ENST00000414271 501 ntBASIC5.37□□□□□ -1.55
SEC61A2Q9H9S3 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC5.37□□□□□ -1.55
SEC61A2Q9H9S3 RPL35AP31-201ENST00000418340 337 ntBASIC5.37□□□□□ -1.55
SEC61A2Q9H9S3 AC092647.1-201ENST00000420654 287 ntBASIC5.37□□□□□ -1.55
SEC61A2Q9H9S3 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC5.37□□□□□ -1.55
SEC61A2Q9H9S3 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC5.37□□□□□ -1.55
SEC61A2Q9H9S3 AMYP1-201ENST00000440059 1023 ntBASIC5.37□□□□□ -1.55
SEC61A2Q9H9S3 AC112653.1-201ENST00000443851 386 ntBASIC5.37□□□□□ -1.55
SEC61A2Q9H9S3 COX6CP18-201ENST00000448769 222 ntBASIC5.37□□□□□ -1.55
SEC61A2Q9H9S3 MTCO3P11-201ENST00000455103 774 ntBASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 117.8 ms