Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 MIR5685-201ENST00000579080 79 ntBASIC6.52□□□□□ -1.37
SCAPERQ9BY12 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC6.52□□□□□ -1.37
SCAPERQ9BY12 AL121772.2-201ENST00000614331 297 ntBASIC6.52□□□□□ -1.37
SCAPERQ9BY12 AL021997.2-201ENST00000615674 271 ntBASIC6.52□□□□□ -1.37
SCAPERQ9BY12 MIR7151-201ENST00000617477 60 ntBASIC6.52□□□□□ -1.37
SCAPERQ9BY12 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC6.52□□□□□ -1.37
SCAPERQ9BY12 MAPK10-286ENST00000641208 8747 ntBASIC6.52□□□□□ -1.37
SCAPERQ9BY12 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
SCAPERQ9BY12 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
SCAPERQ9BY12 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC6.52□□□□□ -1.37
SCAPERQ9BY12 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC6.51□□□□□ -1.37
SCAPERQ9BY12 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
SCAPERQ9BY12 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
SCAPERQ9BY12 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC6.51□□□□□ -1.37
SCAPERQ9BY12 RNU6-525P-201ENST00000363685 104 ntBASIC6.51□□□□□ -1.37
SCAPERQ9BY12 RPS20P14-201ENST00000412545 360 ntBASIC6.51□□□□□ -1.37
SCAPERQ9BY12 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC6.51□□□□□ -1.37
SCAPERQ9BY12 AL157884.3-201ENST00000448273 1184 ntBASIC6.51□□□□□ -1.37
SCAPERQ9BY12 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC6.51□□□□□ -1.37
SCAPERQ9BY12 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
SCAPERQ9BY12 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC6.51□□□□□ -1.37
SCAPERQ9BY12 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC6.51□□□□□ -1.37
SCAPERQ9BY12 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC6.51□□□□□ -1.37
SCAPERQ9BY12 SNORA51-201ENST00000606420 132 ntBASIC6.51□□□□□ -1.37
SCAPERQ9BY12 AC090912.3-201ENST00000609775 533 ntBASIC6.51□□□□□ -1.37
SCAPERQ9BY12 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
SCAPERQ9BY12 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC6.51□□□□□ -1.37
SCAPERQ9BY12 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC6.51□□□□□ -1.37
SCAPERQ9BY12 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC6.51□□□□□ -1.37
SCAPERQ9BY12 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
SCAPERQ9BY12 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC6.51□□□□□ -1.37
SCAPERQ9BY12 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
SCAPERQ9BY12 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC6.51□□□□□ -1.37
SCAPERQ9BY12 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC6.51□□□□□ -1.37
SCAPERQ9BY12 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC6.51□□□□□ -1.37
SCAPERQ9BY12 RNA5SP119-201ENST00000362715 117 ntBASIC6.5□□□□□ -1.37
SCAPERQ9BY12 TPT1P2-201ENST00000413105 503 ntBASIC6.5□□□□□ -1.37
SCAPERQ9BY12 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC6.5□□□□□ -1.37
SCAPERQ9BY12 MRPL48P1-201ENST00000445390 636 ntBASIC6.5□□□□□ -1.37
SCAPERQ9BY12 PGBD4P4-201ENST00000509673 613 ntBASIC6.5□□□□□ -1.37
SCAPERQ9BY12 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC6.5□□□□□ -1.37
SCAPERQ9BY12 FTH1P11-201ENST00000517577 551 ntBASIC6.5□□□□□ -1.37
SCAPERQ9BY12 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC6.5□□□□□ -1.37
SCAPERQ9BY12 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC6.5□□□□□ -1.37
SCAPERQ9BY12 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC6.5□□□□□ -1.37
SCAPERQ9BY12 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC6.5□□□□□ -1.37
SCAPERQ9BY12 AC091953.5-201ENST00000622919 233 ntBASIC6.5□□□□□ -1.37
SCAPERQ9BY12 FP325313.1-201ENST00000638228 703 ntBASIC6.5□□□□□ -1.37
SCAPERQ9BY12 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC6.5□□□□□ -1.37
SCAPERQ9BY12 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SCAPERQ9BY12 AL359922.3-201ENST00000624779 1670 ntBASIC6.5□□□□□ -1.37
SCAPERQ9BY12 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC6.5□□□□□ -1.37
SCAPERQ9BY12 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC6.5□□□□□ -1.37
SCAPERQ9BY12 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
SCAPERQ9BY12 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
SCAPERQ9BY12 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SCAPERQ9BY12 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC6.5□□□□□ -1.37
SCAPERQ9BY12 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC6.5□□□□□ -1.37
SCAPERQ9BY12 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SCAPERQ9BY12 AC008280.1-201ENST00000418851 412 ntBASIC6.5□□□□□ -1.37
SCAPERQ9BY12 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC6.5□□□□□ -1.37
SCAPERQ9BY12 AL050321.1-201ENST00000432363 400 ntBASIC6.5□□□□□ -1.37
SCAPERQ9BY12 TPT1P1-201ENST00000458495 518 ntBASIC6.5□□□□□ -1.37
SCAPERQ9BY12 RPL35AP15-201ENST00000468042 339 ntBASIC6.5□□□□□ -1.37
SCAPERQ9BY12 AC007688.1-201ENST00000475592 759 ntBASIC6.5□□□□□ -1.37
SCAPERQ9BY12 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC6.5□□□□□ -1.37
SCAPERQ9BY12 OR4A2P-201ENST00000527276 913 ntBASIC6.5□□□□□ -1.37
SCAPERQ9BY12 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC6.5□□□□□ -1.37
SCAPERQ9BY12 AC107982.3-201ENST00000584957 985 ntBASIC6.5□□□□□ -1.37
SCAPERQ9BY12 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC6.5□□□□□ -1.37
SCAPERQ9BY12 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
SCAPERQ9BY12 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SCAPERQ9BY12 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC6.49□□□□□ -1.37
SCAPERQ9BY12 FAM91A3P-201ENST00000456826 2544 ntBASIC6.49□□□□□ -1.37
SCAPERQ9BY12 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
SCAPERQ9BY12 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
SCAPERQ9BY12 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC6.49□□□□□ -1.37
SCAPERQ9BY12 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC6.49□□□□□ -1.37
SCAPERQ9BY12 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
SCAPERQ9BY12 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC6.49□□□□□ -1.37
SCAPERQ9BY12 RNA5SP175-201ENST00000364275 119 ntBASIC6.49□□□□□ -1.37
SCAPERQ9BY12 RNU1-63P-201ENST00000383902 164 ntBASIC6.49□□□□□ -1.37
SCAPERQ9BY12 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC6.49□□□□□ -1.37
SCAPERQ9BY12 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC6.49□□□□□ -1.37
SCAPERQ9BY12 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC6.49□□□□□ -1.37
SCAPERQ9BY12 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC6.49□□□□□ -1.37
SCAPERQ9BY12 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC6.49□□□□□ -1.37
SCAPERQ9BY12 RN7SL435P-201ENST00000584418 282 ntBASIC6.49□□□□□ -1.37
SCAPERQ9BY12 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC6.49□□□□□ -1.37
SCAPERQ9BY12 AC008013.2-202ENST00000637965 364 ntBASIC6.49□□□□□ -1.37
SCAPERQ9BY12 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC6.49□□□□□ -1.37
SCAPERQ9BY12 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
SCAPERQ9BY12 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SCAPERQ9BY12 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC6.48□□□□□ -1.37
SCAPERQ9BY12 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SCAPERQ9BY12 AL121839.2-201ENST00000565058 6943 ntBASIC6.48□□□□□ -1.37
SCAPERQ9BY12 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SCAPERQ9BY12 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC6.48□□□□□ -1.37
SCAPERQ9BY12 RNU1-20P-201ENST00000363314 162 ntBASIC6.48□□□□□ -1.37
SCAPERQ9BY12 RNU6-316P-201ENST00000391027 107 ntBASIC6.48□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms