Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
RSPO3Q9BXY4 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
RSPO3Q9BXY4 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
RSPO3Q9BXY4 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
RSPO3Q9BXY4 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
RSPO3Q9BXY4 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
RSPO3Q9BXY4 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.04□□□□□ -1.76
RSPO3Q9BXY4 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
RSPO3Q9BXY4 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.04□□□□□ -1.76
RSPO3Q9BXY4 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
RSPO3Q9BXY4 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
RSPO3Q9BXY4 OR52B1P-201ENST00000316506 909 ntBASIC4.04□□□□□ -1.76
RSPO3Q9BXY4 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
RSPO3Q9BXY4 RNU1-108P-201ENST00000362556 161 ntBASIC4.04□□□□□ -1.76
RSPO3Q9BXY4 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
RSPO3Q9BXY4 SNORA11-201ENST00000408789 128 ntBASIC4.04□□□□□ -1.76
RSPO3Q9BXY4 RPS20P14-201ENST00000412545 360 ntBASIC4.04□□□□□ -1.76
RSPO3Q9BXY4 AC106901.1-201ENST00000425086 698 ntBASIC4.04□□□□□ -1.76
RSPO3Q9BXY4 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.04□□□□□ -1.76
RSPO3Q9BXY4 AC096741.1-201ENST00000472250 846 ntBASIC4.04□□□□□ -1.76
RSPO3Q9BXY4 OR52A4P-201ENST00000472867 958 ntBASIC4.04□□□□□ -1.76
RSPO3Q9BXY4 RPS27AP16-201ENST00000492222 470 ntBASIC4.04□□□□□ -1.76
RSPO3Q9BXY4 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.04□□□□□ -1.76
RSPO3Q9BXY4 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC4.04□□□□□ -1.76
RSPO3Q9BXY4 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
RSPO3Q9BXY4 PPBPP1-201ENST00000510807 373 ntBASIC4.04□□□□□ -1.76
RSPO3Q9BXY4 AP002981.1-201ENST00000517692 975 ntBASIC4.04□□□□□ -1.76
RSPO3Q9BXY4 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.04□□□□□ -1.76
RSPO3Q9BXY4 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.04□□□□□ -1.76
RSPO3Q9BXY4 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC4.04□□□□□ -1.76
RSPO3Q9BXY4 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC4.04□□□□□ -1.76
RSPO3Q9BXY4 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.04□□□□□ -1.76
RSPO3Q9BXY4 TOMM20P2-201ENST00000540082 421 ntBASIC4.04□□□□□ -1.76
RSPO3Q9BXY4 MEG8-217ENST00000556637 924 ntTSL 5 BASIC4.04□□□□□ -1.76
RSPO3Q9BXY4 AC084783.1-201ENST00000565846 910 ntBASIC4.04□□□□□ -1.76
RSPO3Q9BXY4 AC105036.1-201ENST00000566222 271 ntBASIC4.04□□□□□ -1.76
RSPO3Q9BXY4 AC021483.2-201ENST00000567415 758 ntBASIC4.04□□□□□ -1.76
RSPO3Q9BXY4 MIR4284-201ENST00000578924 81 ntBASIC4.04□□□□□ -1.76
RSPO3Q9BXY4 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.04□□□□□ -1.76
RSPO3Q9BXY4 AC008782.1-201ENST00000603386 430 ntBASIC4.04□□□□□ -1.76
RSPO3Q9BXY4 AC087468.1-201ENST00000604365 630 ntBASIC4.04□□□□□ -1.76
RSPO3Q9BXY4 LINC00901.1-201ENST00000617252 152 ntBASIC4.04□□□□□ -1.76
RSPO3Q9BXY4 AC019278.1-201ENST00000623516 479 ntBASIC4.04□□□□□ -1.76
RSPO3Q9BXY4 AP002967.1-201ENST00000624203 539 ntBASIC4.04□□□□□ -1.76
RSPO3Q9BXY4 AC016717.3-201ENST00000624730 554 ntBASIC4.04□□□□□ -1.76
RSPO3Q9BXY4 AL049536.1-201ENST00000625043 744 ntBASIC4.04□□□□□ -1.76
RSPO3Q9BXY4 AC055839.1-201ENST00000634467 498 ntBASIC4.04□□□□□ -1.76
RSPO3Q9BXY4 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
RSPO3Q9BXY4 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
RSPO3Q9BXY4 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
RSPO3Q9BXY4 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
RSPO3Q9BXY4 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.04□□□□□ -1.76
RSPO3Q9BXY4 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.04□□□□□ -1.76
RSPO3Q9BXY4 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC4.03□□□□□ -1.76
RSPO3Q9BXY4 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
RSPO3Q9BXY4 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
RSPO3Q9BXY4 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
RSPO3Q9BXY4 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
RSPO3Q9BXY4 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
RSPO3Q9BXY4 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC4.03□□□□□ -1.76
RSPO3Q9BXY4 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
RSPO3Q9BXY4 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.03□□□□□ -1.76
RSPO3Q9BXY4 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
RSPO3Q9BXY4 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.03□□□□□ -1.76
RSPO3Q9BXY4 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
RSPO3Q9BXY4 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.03□□□□□ -1.76
RSPO3Q9BXY4 AL035696.2-201ENST00000407941 709 ntBASIC4.03□□□□□ -1.76
RSPO3Q9BXY4 TMSB10P2-201ENST00000416049 131 ntBASIC4.03□□□□□ -1.76
RSPO3Q9BXY4 AC119751.6-201ENST00000416712 186 ntBASIC4.03□□□□□ -1.76
RSPO3Q9BXY4 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.03□□□□□ -1.76
RSPO3Q9BXY4 AL606490.8-201ENST00000441624 319 ntBASIC4.03□□□□□ -1.76
RSPO3Q9BXY4 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.03□□□□□ -1.76
RSPO3Q9BXY4 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.03□□□□□ -1.76
RSPO3Q9BXY4 RPL35AP15-201ENST00000468042 339 ntBASIC4.03□□□□□ -1.76
RSPO3Q9BXY4 RN7SL354P-201ENST00000469282 294 ntBASIC4.03□□□□□ -1.76
RSPO3Q9BXY4 RPS26P28-201ENST00000470806 348 ntBASIC4.03□□□□□ -1.76
RSPO3Q9BXY4 AC068587.1-201ENST00000483613 781 ntBASIC4.03□□□□□ -1.76
RSPO3Q9BXY4 UBA52P3-201ENST00000491303 382 ntBASIC4.03□□□□□ -1.76
RSPO3Q9BXY4 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC4.03□□□□□ -1.76
RSPO3Q9BXY4 AC113430.1-201ENST00000506872 718 ntBASIC4.03□□□□□ -1.76
RSPO3Q9BXY4 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.03□□□□□ -1.76
RSPO3Q9BXY4 ATP1B1P1-201ENST00000509767 915 ntBASIC4.03□□□□□ -1.76
RSPO3Q9BXY4 C1GALT1P3-201ENST00000522049 819 ntBASIC4.03□□□□□ -1.76
RSPO3Q9BXY4 OR5BC1P-201ENST00000529327 739 ntBASIC4.03□□□□□ -1.76
RSPO3Q9BXY4 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
RSPO3Q9BXY4 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.03□□□□□ -1.76
RSPO3Q9BXY4 AC079587.1-201ENST00000603846 277 ntBASIC4.03□□□□□ -1.76
RSPO3Q9BXY4 AL031666.3-201ENST00000609320 1006 ntBASIC4.03□□□□□ -1.76
RSPO3Q9BXY4 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
RSPO3Q9BXY4 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC4.03□□□□□ -1.76
RSPO3Q9BXY4 AP000346.3-201ENST00000622821 210 ntBASIC4.03□□□□□ -1.76
RSPO3Q9BXY4 FP325313.1-201ENST00000638228 703 ntBASIC4.03□□□□□ -1.76
RSPO3Q9BXY4 LINC01808-202ENST00000641680 1116 ntBASIC4.03□□□□□ -1.76
RSPO3Q9BXY4 RAD17P1-201ENST00000418130 2042 ntBASIC4.03□□□□□ -1.76
RSPO3Q9BXY4 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.03□□□□□ -1.76
RSPO3Q9BXY4 AC016588.2-201ENST00000632484 3021 ntBASIC4.03□□□□□ -1.76
RSPO3Q9BXY4 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
RSPO3Q9BXY4 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
RSPO3Q9BXY4 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
RSPO3Q9BXY4 AL132640.2-201ENST00000559968 1698 ntBASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms