Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SNX18Q96RF0 AC027544.3-201ENST00000535082 757 ntBASIC5.05□□□□□ -1.6
SNX18Q96RF0 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC5.05□□□□□ -1.6
SNX18Q96RF0 AC010198.2-201ENST00000550612 259 ntBASIC5.05□□□□□ -1.6
SNX18Q96RF0 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.05□□□□□ -1.6
SNX18Q96RF0 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC5.05□□□□□ -1.6
SNX18Q96RF0 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC5.05□□□□□ -1.6
SNX18Q96RF0 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC5.05□□□□□ -1.6
SNX18Q96RF0 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC5.05□□□□□ -1.6
SNX18Q96RF0 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC5.05□□□□□ -1.6
SNX18Q96RF0 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC5.05□□□□□ -1.6
SNX18Q96RF0 AC022069.1-201ENST00000582910 658 ntBASIC5.05□□□□□ -1.6
SNX18Q96RF0 AC119751.7-201ENST00000600494 245 ntBASIC5.05□□□□□ -1.6
SNX18Q96RF0 AC105129.3-201ENST00000605455 485 ntBASIC5.05□□□□□ -1.6
SNX18Q96RF0 AP005431.1-201ENST00000618479 319 ntBASIC5.05□□□□□ -1.6
SNX18Q96RF0 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
SNX18Q96RF0 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SNX18Q96RF0 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC5.05□□□□□ -1.6
SNX18Q96RF0 AC011933.2-201ENST00000578539 2790 ntBASIC5.05□□□□□ -1.6
SNX18Q96RF0 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SNX18Q96RF0 AC007996.1-201ENST00000620414 2821 ntBASIC5.05□□□□□ -1.6
SNX18Q96RF0 AC138393.1-206ENST00000540997 1886 ntBASIC5.05□□□□□ -1.6
SNX18Q96RF0 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
SNX18Q96RF0 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.04□□□□□ -1.6
SNX18Q96RF0 MTND4P5-201ENST00000435821 1374 ntBASIC5.04□□□□□ -1.6
SNX18Q96RF0 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.04□□□□□ -1.6
SNX18Q96RF0 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.04□□□□□ -1.6
SNX18Q96RF0 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.04□□□□□ -1.6
SNX18Q96RF0 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
SNX18Q96RF0 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC5.04□□□□□ -1.6
SNX18Q96RF0 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
SNX18Q96RF0 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.04□□□□□ -1.6
SNX18Q96RF0 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
SNX18Q96RF0 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
SNX18Q96RF0 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC5.04□□□□□ -1.6
SNX18Q96RF0 RNA5SP326-201ENST00000363209 110 ntBASIC5.04□□□□□ -1.6
SNX18Q96RF0 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
SNX18Q96RF0 ATP5F1P3-201ENST00000397213 657 ntBASIC5.04□□□□□ -1.6
SNX18Q96RF0 OR7E101P-201ENST00000400428 513 ntBASIC5.04□□□□□ -1.6
SNX18Q96RF0 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
SNX18Q96RF0 RN7SKP229-201ENST00000410465 302 ntBASIC5.04□□□□□ -1.6
SNX18Q96RF0 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC5.04□□□□□ -1.6
SNX18Q96RF0 AC027644.1-201ENST00000419595 298 ntBASIC5.04□□□□□ -1.6
SNX18Q96RF0 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC5.04□□□□□ -1.6
SNX18Q96RF0 MTND1P32-201ENST00000433043 938 ntBASIC5.04□□□□□ -1.6
SNX18Q96RF0 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC5.04□□□□□ -1.6
SNX18Q96RF0 HSD52-202ENST00000436225 772 ntTSL 3 BASIC5.04□□□□□ -1.6
SNX18Q96RF0 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC5.04□□□□□ -1.6
SNX18Q96RF0 RPS27AP8-201ENST00000452665 445 ntBASIC5.04□□□□□ -1.6
SNX18Q96RF0 AC108734.3-201ENST00000481241 1165 ntBASIC5.04□□□□□ -1.6
SNX18Q96RF0 RPL7P40-201ENST00000481703 745 ntBASIC5.04□□□□□ -1.6
SNX18Q96RF0 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC5.04□□□□□ -1.6
SNX18Q96RF0 NENFP3-201ENST00000503735 313 ntBASIC5.04□□□□□ -1.6
SNX18Q96RF0 MTCYBP16-201ENST00000509187 1129 ntBASIC5.04□□□□□ -1.6
SNX18Q96RF0 FGB-207ENST00000509493 1164 ntTSL 5 BASIC5.04□□□□□ -1.6
SNX18Q96RF0 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC5.04□□□□□ -1.6
SNX18Q96RF0 AL671862.1-201ENST00000515851 349 ntBASIC5.04□□□□□ -1.6
SNX18Q96RF0 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC5.04□□□□□ -1.6
SNX18Q96RF0 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC5.04□□□□□ -1.6
SNX18Q96RF0 AC124293.1-201ENST00000530034 493 ntBASIC5.04□□□□□ -1.6
SNX18Q96RF0 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC5.04□□□□□ -1.6
SNX18Q96RF0 NBEAP1-201ENST00000554452 979 ntBASIC5.04□□□□□ -1.6
SNX18Q96RF0 AC040958.1-201ENST00000561102 201 ntBASIC5.04□□□□□ -1.6
SNX18Q96RF0 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC5.04□□□□□ -1.6
SNX18Q96RF0 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC5.04□□□□□ -1.6
SNX18Q96RF0 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC5.04□□□□□ -1.6
SNX18Q96RF0 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC5.04□□□□□ -1.6
SNX18Q96RF0 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC5.04□□□□□ -1.6
SNX18Q96RF0 AC135628.1-201ENST00000568867 534 ntBASIC5.04□□□□□ -1.6
SNX18Q96RF0 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC5.04□□□□□ -1.6
SNX18Q96RF0 FAM27E4-201ENST00000605259 342 ntBASIC5.04□□□□□ -1.6
SNX18Q96RF0 AC107075.1-201ENST00000613695 314 ntBASIC5.04□□□□□ -1.6
SNX18Q96RF0 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.04□□□□□ -1.6
SNX18Q96RF0 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC5.04□□□□□ -1.6
SNX18Q96RF0 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC5.04□□□□□ -1.6
SNX18Q96RF0 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
SNX18Q96RF0 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SNX18Q96RF0 NSRP1P1-201ENST00000444067 1693 ntBASIC5.04□□□□□ -1.6
SNX18Q96RF0 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SNX18Q96RF0 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SNX18Q96RF0 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.04□□□□□ -1.6
SNX18Q96RF0 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SNX18Q96RF0 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC5.03□□□□□ -1.6
SNX18Q96RF0 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
SNX18Q96RF0 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SNX18Q96RF0 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
SNX18Q96RF0 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC5.03□□□□□ -1.6
SNX18Q96RF0 AC100871.1-201ENST00000507871 1456 ntBASIC5.03□□□□□ -1.6
SNX18Q96RF0 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
SNX18Q96RF0 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SNX18Q96RF0 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SNX18Q96RF0 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SNX18Q96RF0 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC5.03□□□□□ -1.6
SNX18Q96RF0 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.03□□□□□ -1.6
SNX18Q96RF0 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
SNX18Q96RF0 RNA5SP242-201ENST00000364171 118 ntBASIC5.03□□□□□ -1.6
SNX18Q96RF0 snoZ40.1-201ENST00000364540 72 ntBASIC5.03□□□□□ -1.6
SNX18Q96RF0 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SNX18Q96RF0 Y_RNA.465-201ENST00000384293 102 ntBASIC5.03□□□□□ -1.6
SNX18Q96RF0 RSL24D1P4-201ENST00000400938 484 ntBASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms