Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.49□□□□□ -1.69
ECHDC3Q96DC8 AL596275.2-204ENST00000641628 552 ntBASIC4.49□□□□□ -1.69
ECHDC3Q96DC8 AL596275.2-206ENST00000641957 626 ntBASIC4.49□□□□□ -1.69
ECHDC3Q96DC8 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.49□□□□□ -1.69
ECHDC3Q96DC8 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.49□□□□□ -1.69
ECHDC3Q96DC8 HSPD1P14-201ENST00000432666 1618 ntBASIC4.49□□□□□ -1.69
ECHDC3Q96DC8 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
ECHDC3Q96DC8 AC107027.3-201ENST00000565095 3473 ntBASIC4.49□□□□□ -1.69
ECHDC3Q96DC8 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.49□□□□□ -1.69
ECHDC3Q96DC8 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
ECHDC3Q96DC8 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
ECHDC3Q96DC8 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.48□□□□□ -1.69
ECHDC3Q96DC8 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
ECHDC3Q96DC8 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
ECHDC3Q96DC8 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
ECHDC3Q96DC8 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
ECHDC3Q96DC8 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
ECHDC3Q96DC8 NXPH1-205ENST00000602349 1953 ntBASIC4.48□□□□□ -1.69
ECHDC3Q96DC8 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.48□□□□□ -1.69
ECHDC3Q96DC8 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.48□□□□□ -1.69
ECHDC3Q96DC8 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
ECHDC3Q96DC8 RNU1-63P-201ENST00000383902 164 ntBASIC4.48□□□□□ -1.69
ECHDC3Q96DC8 VDAC1P9-201ENST00000412766 841 ntBASIC4.48□□□□□ -1.69
ECHDC3Q96DC8 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC4.48□□□□□ -1.69
ECHDC3Q96DC8 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC4.48□□□□□ -1.69
ECHDC3Q96DC8 AL139095.3-201ENST00000419672 1203 ntBASIC4.48□□□□□ -1.69
ECHDC3Q96DC8 ARAFP1-201ENST00000422172 605 ntBASIC4.48□□□□□ -1.69
ECHDC3Q96DC8 AL592293.2-201ENST00000422292 996 ntBASIC4.48□□□□□ -1.69
ECHDC3Q96DC8 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.48□□□□□ -1.69
ECHDC3Q96DC8 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.48□□□□□ -1.69
ECHDC3Q96DC8 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC4.48□□□□□ -1.69
ECHDC3Q96DC8 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC4.48□□□□□ -1.69
ECHDC3Q96DC8 AC114495.1-201ENST00000441274 436 ntBASIC4.48□□□□□ -1.69
ECHDC3Q96DC8 MTCO3P17-201ENST00000443775 513 ntBASIC4.48□□□□□ -1.69
ECHDC3Q96DC8 RPL7P33-201ENST00000444159 742 ntBASIC4.48□□□□□ -1.69
ECHDC3Q96DC8 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
ECHDC3Q96DC8 AC009220.1-201ENST00000451614 275 ntBASIC4.48□□□□□ -1.69
ECHDC3Q96DC8 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
ECHDC3Q96DC8 OR51K1P-201ENST00000510214 950 ntBASIC4.48□□□□□ -1.69
ECHDC3Q96DC8 BTG4P1-201ENST00000510421 183 ntBASIC4.48□□□□□ -1.69
ECHDC3Q96DC8 RNU4-18P-201ENST00000516751 149 ntBASIC4.48□□□□□ -1.69
ECHDC3Q96DC8 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC4.48□□□□□ -1.69
ECHDC3Q96DC8 NPM1P6-201ENST00000521088 871 ntBASIC4.48□□□□□ -1.69
ECHDC3Q96DC8 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.48□□□□□ -1.69
ECHDC3Q96DC8 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC4.48□□□□□ -1.69
ECHDC3Q96DC8 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC4.48□□□□□ -1.69
ECHDC3Q96DC8 GSTP1P1-201ENST00000548078 319 ntBASIC4.48□□□□□ -1.69
ECHDC3Q96DC8 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC4.48□□□□□ -1.69
ECHDC3Q96DC8 AC091905.2-201ENST00000623143 306 ntBASIC4.48□□□□□ -1.69
ECHDC3Q96DC8 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.48□□□□□ -1.69
ECHDC3Q96DC8 MAPK10-320ENST00000641462 6696 ntBASIC4.48□□□□□ -1.69
ECHDC3Q96DC8 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.48□□□□□ -1.69
ECHDC3Q96DC8 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
ECHDC3Q96DC8 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC4.47□□□□□ -1.69
ECHDC3Q96DC8 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.47□□□□□ -1.69
ECHDC3Q96DC8 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
ECHDC3Q96DC8 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.47□□□□□ -1.69
ECHDC3Q96DC8 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
ECHDC3Q96DC8 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
ECHDC3Q96DC8 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.47□□□□□ -1.69
ECHDC3Q96DC8 AC008033.1-201ENST00000216407 1162 ntBASIC4.47□□□□□ -1.69
ECHDC3Q96DC8 OR5P1P-201ENST00000299512 925 ntBASIC4.47□□□□□ -1.69
ECHDC3Q96DC8 AC126755.2-208ENST00000327792 462 ntBASIC4.47□□□□□ -1.69
ECHDC3Q96DC8 AC138969.1-213ENST00000331436 462 ntBASIC4.47□□□□□ -1.69
ECHDC3Q96DC8 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
ECHDC3Q96DC8 Y_RNA.62-201ENST00000362840 99 ntBASIC4.47□□□□□ -1.69
ECHDC3Q96DC8 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.47□□□□□ -1.69
ECHDC3Q96DC8 MIR141-201ENST00000384975 95 ntBASIC4.47□□□□□ -1.69
ECHDC3Q96DC8 MIR3065-201ENST00000390137 79 ntBASIC4.47□□□□□ -1.69
ECHDC3Q96DC8 SNORA74C-2-201ENST00000411179 201 ntBASIC4.47□□□□□ -1.69
ECHDC3Q96DC8 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC4.47□□□□□ -1.69
ECHDC3Q96DC8 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC4.47□□□□□ -1.69
ECHDC3Q96DC8 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC4.47□□□□□ -1.69
ECHDC3Q96DC8 AC022022.1-201ENST00000430304 178 ntBASIC4.47□□□□□ -1.69
ECHDC3Q96DC8 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.47□□□□□ -1.69
ECHDC3Q96DC8 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC4.47□□□□□ -1.69
ECHDC3Q96DC8 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.47□□□□□ -1.69
ECHDC3Q96DC8 AC099063.2-201ENST00000446360 662 ntBASIC4.47□□□□□ -1.69
ECHDC3Q96DC8 OR6C72P-201ENST00000451403 892 ntBASIC4.47□□□□□ -1.69
ECHDC3Q96DC8 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC4.47□□□□□ -1.69
ECHDC3Q96DC8 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC4.47□□□□□ -1.69
ECHDC3Q96DC8 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
ECHDC3Q96DC8 RN7SL481P-201ENST00000477764 299 ntBASIC4.47□□□□□ -1.69
ECHDC3Q96DC8 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC4.47□□□□□ -1.69
ECHDC3Q96DC8 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.47□□□□□ -1.69
ECHDC3Q96DC8 RN7SL810P-201ENST00000493031 276 ntBASIC4.47□□□□□ -1.69
ECHDC3Q96DC8 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC4.47□□□□□ -1.69
ECHDC3Q96DC8 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC4.47□□□□□ -1.69
ECHDC3Q96DC8 RNA5SP497-201ENST00000516081 97 ntBASIC4.47□□□□□ -1.69
ECHDC3Q96DC8 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC4.47□□□□□ -1.69
ECHDC3Q96DC8 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.47□□□□□ -1.69
ECHDC3Q96DC8 AC009643.1-201ENST00000532030 391 ntBASIC4.47□□□□□ -1.69
ECHDC3Q96DC8 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
ECHDC3Q96DC8 MEG8-217ENST00000556637 924 ntTSL 5 BASIC4.47□□□□□ -1.69
ECHDC3Q96DC8 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC4.47□□□□□ -1.69
ECHDC3Q96DC8 MIR4284-201ENST00000578924 81 ntBASIC4.47□□□□□ -1.69
ECHDC3Q96DC8 AF230666.2-201ENST00000602328 725 ntBASIC4.47□□□□□ -1.69
ECHDC3Q96DC8 AC079587.1-201ENST00000603846 277 ntBASIC4.47□□□□□ -1.69
ECHDC3Q96DC8 AC010201.1-201ENST00000605051 540 ntBASIC4.47□□□□□ -1.69
ECHDC3Q96DC8 AL023583.1-201ENST00000607518 1143 ntBASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms