Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 AC122108.2-201ENST00000611946 526 ntBASIC5.32□□□□□ -1.56
ATG4AQ8WYN0 AC011472.4-201ENST00000615848 491 ntBASIC5.32□□□□□ -1.56
ATG4AQ8WYN0 AC037198.3-201ENST00000616754 526 ntBASIC5.32□□□□□ -1.56
ATG4AQ8WYN0 AC005840.5-201ENST00000619166 599 ntBASIC5.32□□□□□ -1.56
ATG4AQ8WYN0 BX005214.3-202ENST00000619809 325 ntBASIC5.32□□□□□ -1.56
ATG4AQ8WYN0 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
ATG4AQ8WYN0 AP001962.1-201ENST00000624114 559 ntBASIC5.32□□□□□ -1.56
ATG4AQ8WYN0 AL691477.1-201ENST00000624398 162 ntBASIC5.32□□□□□ -1.56
ATG4AQ8WYN0 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.32□□□□□ -1.56
ATG4AQ8WYN0 UGT2B26P-201ENST00000508672 1613 ntBASIC5.32□□□□□ -1.56
ATG4AQ8WYN0 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.32□□□□□ -1.56
ATG4AQ8WYN0 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
ATG4AQ8WYN0 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
ATG4AQ8WYN0 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
ATG4AQ8WYN0 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.32□□□□□ -1.56
ATG4AQ8WYN0 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.32□□□□□ -1.56
ATG4AQ8WYN0 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
ATG4AQ8WYN0 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC5.32□□□□□ -1.56
ATG4AQ8WYN0 ACTR3BP5-201ENST00000448440 1479 ntBASIC5.32□□□□□ -1.56
ATG4AQ8WYN0 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.32□□□□□ -1.56
ATG4AQ8WYN0 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.32□□□□□ -1.56
ATG4AQ8WYN0 POMP-202ENST00000460403 1428 ntTSL 3 BASIC5.31□□□□□ -1.56
ATG4AQ8WYN0 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.31□□□□□ -1.56
ATG4AQ8WYN0 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
ATG4AQ8WYN0 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
ATG4AQ8WYN0 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
ATG4AQ8WYN0 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
ATG4AQ8WYN0 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
ATG4AQ8WYN0 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC5.31□□□□□ -1.56
ATG4AQ8WYN0 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
ATG4AQ8WYN0 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
ATG4AQ8WYN0 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
ATG4AQ8WYN0 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
ATG4AQ8WYN0 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
ATG4AQ8WYN0 AC011447.7-201ENST00000624228 1590 ntBASIC5.31□□□□□ -1.56
ATG4AQ8WYN0 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
ATG4AQ8WYN0 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
ATG4AQ8WYN0 FAM133CP-201ENST00000332869 704 ntBASIC5.31□□□□□ -1.56
ATG4AQ8WYN0 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
ATG4AQ8WYN0 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC5.31□□□□□ -1.56
ATG4AQ8WYN0 RNU6-413P-201ENST00000384115 107 ntBASIC5.31□□□□□ -1.56
ATG4AQ8WYN0 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
ATG4AQ8WYN0 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
ATG4AQ8WYN0 MIR1302-8-201ENST00000408342 128 ntBASIC5.31□□□□□ -1.56
ATG4AQ8WYN0 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC5.31□□□□□ -1.56
ATG4AQ8WYN0 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC5.31□□□□□ -1.56
ATG4AQ8WYN0 RAP1BP1-201ENST00000412709 553 ntBASIC5.31□□□□□ -1.56
ATG4AQ8WYN0 LUZP4P1-201ENST00000415420 344 ntBASIC5.31□□□□□ -1.56
ATG4AQ8WYN0 OR4K6P-201ENST00000416478 897 ntBASIC5.31□□□□□ -1.56
ATG4AQ8WYN0 AL139148.1-201ENST00000427122 680 ntBASIC5.31□□□□□ -1.56
ATG4AQ8WYN0 MOB1AP1-201ENST00000430903 535 ntBASIC5.31□□□□□ -1.56
ATG4AQ8WYN0 YWHAEP5-201ENST00000431545 765 ntBASIC5.31□□□□□ -1.56
ATG4AQ8WYN0 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC5.31□□□□□ -1.56
ATG4AQ8WYN0 AC002542.1-201ENST00000440683 193 ntBASIC5.31□□□□□ -1.56
ATG4AQ8WYN0 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC5.31□□□□□ -1.56
ATG4AQ8WYN0 AC012512.1-201ENST00000446594 718 ntBASIC5.31□□□□□ -1.56
ATG4AQ8WYN0 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
ATG4AQ8WYN0 AC144530.1-201ENST00000452862 555 ntBASIC5.31□□□□□ -1.56
ATG4AQ8WYN0 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC5.31□□□□□ -1.56
ATG4AQ8WYN0 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC5.31□□□□□ -1.56
ATG4AQ8WYN0 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC5.31□□□□□ -1.56
ATG4AQ8WYN0 AC021205.1-201ENST00000468797 348 ntBASIC5.31□□□□□ -1.56
ATG4AQ8WYN0 SIAH1P1-201ENST00000479411 923 ntBASIC5.31□□□□□ -1.56
ATG4AQ8WYN0 AC113347.3-201ENST00000509113 148 ntBASIC5.31□□□□□ -1.56
ATG4AQ8WYN0 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.31□□□□□ -1.56
ATG4AQ8WYN0 TMEM97P2-201ENST00000517841 403 ntBASIC5.31□□□□□ -1.56
ATG4AQ8WYN0 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
ATG4AQ8WYN0 AC012400.1-201ENST00000518452 381 ntBASIC5.31□□□□□ -1.56
ATG4AQ8WYN0 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC5.31□□□□□ -1.56
ATG4AQ8WYN0 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC5.31□□□□□ -1.56
ATG4AQ8WYN0 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC5.31□□□□□ -1.56
ATG4AQ8WYN0 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC5.31□□□□□ -1.56
ATG4AQ8WYN0 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC5.31□□□□□ -1.56
ATG4AQ8WYN0 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
ATG4AQ8WYN0 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
ATG4AQ8WYN0 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC5.31□□□□□ -1.56
ATG4AQ8WYN0 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC5.31□□□□□ -1.56
ATG4AQ8WYN0 AC022662.1-201ENST00000580252 331 ntBASIC5.31□□□□□ -1.56
ATG4AQ8WYN0 AL451086.1-201ENST00000605596 223 ntBASIC5.31□□□□□ -1.56
ATG4AQ8WYN0 AC018638.7-201ENST00000605836 1114 ntBASIC5.31□□□□□ -1.56
ATG4AQ8WYN0 AP003392.5-201ENST00000607857 415 ntBASIC5.31□□□□□ -1.56
ATG4AQ8WYN0 VIS1.1-201ENST00000610517 203 ntBASIC5.31□□□□□ -1.56
ATG4AQ8WYN0 AC139769.3-201ENST00000618383 175 ntBASIC5.31□□□□□ -1.56
ATG4AQ8WYN0 VN1R7P-201ENST00000619242 903 ntBASIC5.31□□□□□ -1.56
ATG4AQ8WYN0 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC5.31□□□□□ -1.56
ATG4AQ8WYN0 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.31□□□□□ -1.56
ATG4AQ8WYN0 OR8B1P-202ENST00000641132 1178 ntBASIC5.31□□□□□ -1.56
ATG4AQ8WYN0 BX005019.1-201ENST00000561881 1810 ntBASIC5.31□□□□□ -1.56
ATG4AQ8WYN0 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
ATG4AQ8WYN0 Z95331.1-201ENST00000623075 23112 ntBASIC5.31□□□□□ -1.56
ATG4AQ8WYN0 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
ATG4AQ8WYN0 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
ATG4AQ8WYN0 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
ATG4AQ8WYN0 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
ATG4AQ8WYN0 AC010266.2-201ENST00000564741 3255 ntBASIC5.31□□□□□ -1.56
ATG4AQ8WYN0 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.31□□□□□ -1.56
ATG4AQ8WYN0 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
ATG4AQ8WYN0 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC5.31□□□□□ -1.56
ATG4AQ8WYN0 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
ATG4AQ8WYN0 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms