Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC4.49□□□□□ -1.69
SHROOM3Q8TF72 AC012409.3-201ENST00000611343 981 ntBASIC4.49□□□□□ -1.69
SHROOM3Q8TF72 BNIP3P41-202ENST00000616656 861 ntBASIC4.49□□□□□ -1.69
SHROOM3Q8TF72 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC4.49□□□□□ -1.69
SHROOM3Q8TF72 AC006065.6-201ENST00000625201 545 ntBASIC4.49□□□□□ -1.69
SHROOM3Q8TF72 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SHROOM3Q8TF72 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.49□□□□□ -1.69
SHROOM3Q8TF72 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.49□□□□□ -1.69
SHROOM3Q8TF72 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
SHROOM3Q8TF72 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
SHROOM3Q8TF72 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SHROOM3Q8TF72 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SHROOM3Q8TF72 CYP1D1P-201ENST00000416662 1433 ntBASIC4.49□□□□□ -1.69
SHROOM3Q8TF72 AP001273.1-201ENST00000624493 3152 ntBASIC4.49□□□□□ -1.69
SHROOM3Q8TF72 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.49□□□□□ -1.69
SHROOM3Q8TF72 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
SHROOM3Q8TF72 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.49□□□□□ -1.69
SHROOM3Q8TF72 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.49□□□□□ -1.69
SHROOM3Q8TF72 RPS26P8-201ENST00000393490 348 ntBASIC4.49□□□□□ -1.69
SHROOM3Q8TF72 ATP5F1P3-201ENST00000397213 657 ntBASIC4.49□□□□□ -1.69
SHROOM3Q8TF72 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.49□□□□□ -1.69
SHROOM3Q8TF72 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.49□□□□□ -1.69
SHROOM3Q8TF72 AC069157.1-201ENST00000421749 137 ntBASIC4.49□□□□□ -1.69
SHROOM3Q8TF72 AL356387.2-201ENST00000422272 243 ntBASIC4.49□□□□□ -1.69
SHROOM3Q8TF72 AC073335.1-201ENST00000427776 363 ntBASIC4.49□□□□□ -1.69
SHROOM3Q8TF72 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC4.49□□□□□ -1.69
SHROOM3Q8TF72 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.49□□□□□ -1.69
SHROOM3Q8TF72 AC114495.1-201ENST00000441274 436 ntBASIC4.49□□□□□ -1.69
SHROOM3Q8TF72 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC4.49□□□□□ -1.69
SHROOM3Q8TF72 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SHROOM3Q8TF72 RPL21P7-201ENST00000557463 483 ntBASIC4.49□□□□□ -1.69
SHROOM3Q8TF72 AC090515.3-201ENST00000560431 315 ntBASIC4.49□□□□□ -1.69
SHROOM3Q8TF72 RPL23AP97-201ENST00000568955 471 ntBASIC4.49□□□□□ -1.69
SHROOM3Q8TF72 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.49□□□□□ -1.69
SHROOM3Q8TF72 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC4.49□□□□□ -1.69
SHROOM3Q8TF72 AC008739.3-201ENST00000603262 127 ntBASIC4.49□□□□□ -1.69
SHROOM3Q8TF72 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.49□□□□□ -1.69
SHROOM3Q8TF72 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SHROOM3Q8TF72 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SHROOM3Q8TF72 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SHROOM3Q8TF72 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.49□□□□□ -1.69
SHROOM3Q8TF72 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
SHROOM3Q8TF72 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC4.48□□□□□ -1.69
SHROOM3Q8TF72 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.48□□□□□ -1.69
SHROOM3Q8TF72 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
SHROOM3Q8TF72 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
SHROOM3Q8TF72 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
SHROOM3Q8TF72 AL157831.1-201ENST00000426134 473 ntBASIC4.48□□□□□ -1.69
SHROOM3Q8TF72 KATNBL1P2-201ENST00000433311 835 ntBASIC4.48□□□□□ -1.69
SHROOM3Q8TF72 ACTR3P2-201ENST00000439585 1257 ntBASIC4.48□□□□□ -1.69
SHROOM3Q8TF72 RPL7L1P8-201ENST00000469911 741 ntBASIC4.48□□□□□ -1.69
SHROOM3Q8TF72 RN7SL691P-201ENST00000494487 301 ntBASIC4.48□□□□□ -1.69
SHROOM3Q8TF72 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
SHROOM3Q8TF72 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.48□□□□□ -1.69
SHROOM3Q8TF72 AC015795.1-201ENST00000513669 327 ntBASIC4.48□□□□□ -1.69
SHROOM3Q8TF72 AL121834.1-201ENST00000572284 509 ntBASIC4.48□□□□□ -1.69
SHROOM3Q8TF72 AC090948.1-201ENST00000607464 549 ntBASIC4.48□□□□□ -1.69
SHROOM3Q8TF72 AC015922.4-201ENST00000612568 690 ntBASIC4.48□□□□□ -1.69
SHROOM3Q8TF72 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC4.48□□□□□ -1.69
SHROOM3Q8TF72 AL023881.1-201ENST00000621088 301 ntBASIC4.48□□□□□ -1.69
SHROOM3Q8TF72 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
SHROOM3Q8TF72 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC4.48□□□□□ -1.69
SHROOM3Q8TF72 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
SHROOM3Q8TF72 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SHROOM3Q8TF72 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
SHROOM3Q8TF72 BOLA3P4-201ENST00000418151 400 ntBASIC4.47□□□□□ -1.69
SHROOM3Q8TF72 RPEP3-201ENST00000425462 676 ntBASIC4.47□□□□□ -1.69
SHROOM3Q8TF72 RPL36AP13-201ENST00000457490 317 ntBASIC4.47□□□□□ -1.69
SHROOM3Q8TF72 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.47□□□□□ -1.69
SHROOM3Q8TF72 AC108475.1-201ENST00000507880 950 ntBASIC4.47□□□□□ -1.69
SHROOM3Q8TF72 BTG4P1-201ENST00000510421 183 ntBASIC4.47□□□□□ -1.69
SHROOM3Q8TF72 AC021146.3-201ENST00000511911 260 ntBASIC4.47□□□□□ -1.69
SHROOM3Q8TF72 AC023136.1-201ENST00000513093 1105 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SHROOM3Q8TF72 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC4.47□□□□□ -1.69
SHROOM3Q8TF72 AP001804.2-201ENST00000533932 910 ntBASIC4.47□□□□□ -1.69
SHROOM3Q8TF72 AC026979.4-201ENST00000606555 645 ntBASIC4.47□□□□□ -1.69
SHROOM3Q8TF72 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.47□□□□□ -1.69
SHROOM3Q8TF72 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.47□□□□□ -1.69
SHROOM3Q8TF72 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.47□□□□□ -1.69
SHROOM3Q8TF72 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
SHROOM3Q8TF72 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SHROOM3Q8TF72 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.47□□□□□ -1.69
SHROOM3Q8TF72 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SHROOM3Q8TF72 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SHROOM3Q8TF72 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
SHROOM3Q8TF72 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC4.47□□□□□ -1.69
SHROOM3Q8TF72 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SHROOM3Q8TF72 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
SHROOM3Q8TF72 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
SHROOM3Q8TF72 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.47□□□□□ -1.69
SHROOM3Q8TF72 AL139095.3-201ENST00000419672 1203 ntBASIC4.47□□□□□ -1.69
SHROOM3Q8TF72 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC4.47□□□□□ -1.69
SHROOM3Q8TF72 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.47□□□□□ -1.69
SHROOM3Q8TF72 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC4.47□□□□□ -1.69
SHROOM3Q8TF72 HSFY6P-201ENST00000445573 403 ntBASIC4.47□□□□□ -1.69
SHROOM3Q8TF72 VN1R32P-201ENST00000452234 905 ntBASIC4.47□□□□□ -1.69
SHROOM3Q8TF72 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC4.47□□□□□ -1.69
SHROOM3Q8TF72 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.47□□□□□ -1.69
SHROOM3Q8TF72 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC4.47□□□□□ -1.69
SHROOM3Q8TF72 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms