Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC5.46□□□□□ -1.53
SLC44A3Q8N4M1 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.46□□□□□ -1.53
SLC44A3Q8N4M1 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC5.46□□□□□ -1.53
SLC44A3Q8N4M1 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
SLC44A3Q8N4M1 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.46□□□□□ -1.53
SLC44A3Q8N4M1 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.46□□□□□ -1.53
SLC44A3Q8N4M1 IRF5P1-201ENST00000504852 2164 ntBASIC5.46□□□□□ -1.53
SLC44A3Q8N4M1 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
SLC44A3Q8N4M1 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC5.46□□□□□ -1.53
SLC44A3Q8N4M1 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.46□□□□□ -1.53
SLC44A3Q8N4M1 OR4F13P-202ENST00000560066 2054 ntBASIC5.46□□□□□ -1.53
SLC44A3Q8N4M1 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SLC44A3Q8N4M1 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
SLC44A3Q8N4M1 MIR133A2-201ENST00000347538 102 ntBASIC5.46□□□□□ -1.54
SLC44A3Q8N4M1 UBE2Q2P1-202ENST00000354771 883 ntBASIC5.46□□□□□ -1.54
SLC44A3Q8N4M1 RNU1-32P-201ENST00000363937 159 ntBASIC5.46□□□□□ -1.54
SLC44A3Q8N4M1 Y_RNA.194-201ENST00000363985 102 ntBASIC5.46□□□□□ -1.54
SLC44A3Q8N4M1 RNA5SP455-201ENST00000365190 119 ntBASIC5.46□□□□□ -1.54
SLC44A3Q8N4M1 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
SLC44A3Q8N4M1 U6.112-201ENST00000384129 70 ntBASIC5.46□□□□□ -1.54
SLC44A3Q8N4M1 MTCO1P56-201ENST00000401674 224 ntBASIC5.46□□□□□ -1.54
SLC44A3Q8N4M1 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.46□□□□□ -1.54
SLC44A3Q8N4M1 TEX41-202ENST00000414256 604 ntTSL 5 BASIC5.46□□□□□ -1.54
SLC44A3Q8N4M1 AL354868.1-201ENST00000417077 482 ntBASIC5.46□□□□□ -1.54
SLC44A3Q8N4M1 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC5.46□□□□□ -1.54
SLC44A3Q8N4M1 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SLC44A3Q8N4M1 RPL7P56-201ENST00000429441 717 ntBASIC5.46□□□□□ -1.54
SLC44A3Q8N4M1 DLGAP5P1-201ENST00000430307 464 ntBASIC5.46□□□□□ -1.54
SLC44A3Q8N4M1 USP24P1-201ENST00000433802 779 ntBASIC5.46□□□□□ -1.54
SLC44A3Q8N4M1 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC5.46□□□□□ -1.54
SLC44A3Q8N4M1 UBE2D3P4-201ENST00000441973 436 ntBASIC5.46□□□□□ -1.54
SLC44A3Q8N4M1 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC5.46□□□□□ -1.54
SLC44A3Q8N4M1 RPL34P26-201ENST00000445636 354 ntBASIC5.46□□□□□ -1.54
SLC44A3Q8N4M1 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC5.46□□□□□ -1.54
SLC44A3Q8N4M1 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SLC44A3Q8N4M1 AC234781.3-201ENST00000452540 973 ntBASIC5.46□□□□□ -1.54
SLC44A3Q8N4M1 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC5.46□□□□□ -1.54
SLC44A3Q8N4M1 RPL12P39-201ENST00000455456 496 ntBASIC5.46□□□□□ -1.54
SLC44A3Q8N4M1 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC5.46□□□□□ -1.54
SLC44A3Q8N4M1 GTF2IP12-201ENST00000456547 356 ntBASIC5.46□□□□□ -1.54
SLC44A3Q8N4M1 AC108734.3-201ENST00000481241 1165 ntBASIC5.46□□□□□ -1.54
SLC44A3Q8N4M1 AC058823.1-201ENST00000485315 474 ntBASIC5.46□□□□□ -1.54
SLC44A3Q8N4M1 ST13P12-201ENST00000508958 1094 ntBASIC5.46□□□□□ -1.54
SLC44A3Q8N4M1 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC5.46□□□□□ -1.54
SLC44A3Q8N4M1 AC011352.1-201ENST00000512300 793 ntBASIC5.46□□□□□ -1.54
SLC44A3Q8N4M1 RNA5SP303-201ENST00000516192 130 ntBASIC5.46□□□□□ -1.54
SLC44A3Q8N4M1 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC5.46□□□□□ -1.54
SLC44A3Q8N4M1 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SLC44A3Q8N4M1 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SLC44A3Q8N4M1 AC136777.2-201ENST00000522979 358 ntBASIC5.46□□□□□ -1.54
SLC44A3Q8N4M1 AC104417.1-201ENST00000523974 751 ntBASIC5.46□□□□□ -1.54
SLC44A3Q8N4M1 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SLC44A3Q8N4M1 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.46□□□□□ -1.54
SLC44A3Q8N4M1 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC5.46□□□□□ -1.54
SLC44A3Q8N4M1 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC5.46□□□□□ -1.54
SLC44A3Q8N4M1 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC5.46□□□□□ -1.54
SLC44A3Q8N4M1 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC5.46□□□□□ -1.54
SLC44A3Q8N4M1 AC015688.2-201ENST00000584523 262 ntBASIC5.46□□□□□ -1.54
SLC44A3Q8N4M1 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC5.46□□□□□ -1.54
SLC44A3Q8N4M1 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC5.46□□□□□ -1.54
SLC44A3Q8N4M1 AC025857.2-201ENST00000602711 238 ntBASIC5.46□□□□□ -1.54
SLC44A3Q8N4M1 AC124312.4-201ENST00000605533 310 ntBASIC5.46□□□□□ -1.54
SLC44A3Q8N4M1 AC016877.3-201ENST00000606778 504 ntBASIC5.46□□□□□ -1.54
SLC44A3Q8N4M1 AL161616.1-201ENST00000611867 286 ntBASIC5.46□□□□□ -1.54
SLC44A3Q8N4M1 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC5.46□□□□□ -1.54
SLC44A3Q8N4M1 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.46□□□□□ -1.54
SLC44A3Q8N4M1 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SLC44A3Q8N4M1 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SLC44A3Q8N4M1 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC5.46□□□□□ -1.54
SLC44A3Q8N4M1 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SLC44A3Q8N4M1 AC084035.1-201ENST00000634543 607 ntBASIC5.46□□□□□ -1.54
SLC44A3Q8N4M1 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
SLC44A3Q8N4M1 AP000473.2-201ENST00000602659 1537 ntBASIC5.46□□□□□ -1.54
SLC44A3Q8N4M1 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC5.46□□□□□ -1.54
SLC44A3Q8N4M1 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC5.46□□□□□ -1.54
SLC44A3Q8N4M1 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.46□□□□□ -1.54
SLC44A3Q8N4M1 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
SLC44A3Q8N4M1 AL356317.1-201ENST00000396110 1436 ntBASIC5.46□□□□□ -1.54
SLC44A3Q8N4M1 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SLC44A3Q8N4M1 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
SLC44A3Q8N4M1 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SLC44A3Q8N4M1 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
SLC44A3Q8N4M1 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SLC44A3Q8N4M1 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SLC44A3Q8N4M1 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SLC44A3Q8N4M1 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SLC44A3Q8N4M1 AC079298.1-201ENST00000625026 1619 ntBASIC5.45□□□□□ -1.54
SLC44A3Q8N4M1 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SLC44A3Q8N4M1 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SLC44A3Q8N4M1 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SLC44A3Q8N4M1 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SLC44A3Q8N4M1 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.45□□□□□ -1.54
SLC44A3Q8N4M1 GNAS-202ENST00000306090 477 ntTSL 5 BASIC5.45□□□□□ -1.54
SLC44A3Q8N4M1 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
SLC44A3Q8N4M1 Y_RNA.77-201ENST00000362962 107 ntBASIC5.45□□□□□ -1.54
SLC44A3Q8N4M1 RSL24D1P4-201ENST00000400938 484 ntBASIC5.45□□□□□ -1.54
SLC44A3Q8N4M1 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC5.45□□□□□ -1.54
SLC44A3Q8N4M1 AL133482.1-201ENST00000415988 498 ntBASIC5.45□□□□□ -1.54
SLC44A3Q8N4M1 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC5.45□□□□□ -1.54
SLC44A3Q8N4M1 AC011233.1-201ENST00000422812 283 ntBASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 160.5 ms