Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 AL662791.3-201ENST00000413771 776 ntBASIC7.44□□□□□ -1.22
SCUBE3Q8IX30 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC7.44□□□□□ -1.22
SCUBE3Q8IX30 MICG-208ENST00000416822 132 ntBASIC7.44□□□□□ -1.22
SCUBE3Q8IX30 MCFD2P1-201ENST00000417812 300 ntBASIC7.44□□□□□ -1.22
SCUBE3Q8IX30 GSTA6P-201ENST00000424144 582 ntBASIC7.44□□□□□ -1.22
SCUBE3Q8IX30 FGF12-202ENST00000430714 603 ntTSL 2 BASIC7.44□□□□□ -1.22
SCUBE3Q8IX30 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC7.44□□□□□ -1.22
SCUBE3Q8IX30 AL356133.1-201ENST00000444762 372 ntBASIC7.44□□□□□ -1.22
SCUBE3Q8IX30 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC7.44□□□□□ -1.22
SCUBE3Q8IX30 SDHCP3-201ENST00000445371 506 ntBASIC7.44□□□□□ -1.22
SCUBE3Q8IX30 AC090142.1-201ENST00000465776 462 ntBASIC7.44□□□□□ -1.22
SCUBE3Q8IX30 AC015724.1-201ENST00000478577 156 ntBASIC7.44□□□□□ -1.22
SCUBE3Q8IX30 AC015911.1-201ENST00000495111 156 ntBASIC7.44□□□□□ -1.22
SCUBE3Q8IX30 RPS4XP18-201ENST00000495480 763 ntBASIC7.44□□□□□ -1.22
SCUBE3Q8IX30 RNU4-29P-201ENST00000515943 174 ntBASIC7.44□□□□□ -1.22
SCUBE3Q8IX30 Y_RNA.665-201ENST00000516177 98 ntBASIC7.44□□□□□ -1.22
SCUBE3Q8IX30 RNU6-635P-201ENST00000516651 102 ntBASIC7.44□□□□□ -1.22
SCUBE3Q8IX30 SCARNA18.2-201ENST00000516882 84 ntBASIC7.44□□□□□ -1.22
SCUBE3Q8IX30 RN7SKP233-201ENST00000517005 110 ntBASIC7.44□□□□□ -1.22
SCUBE3Q8IX30 AP000889.1-201ENST00000530968 660 ntBASIC7.44□□□□□ -1.22
SCUBE3Q8IX30 AC079089.1-203ENST00000533300 431 ntTSL 5 BASIC7.44□□□□□ -1.22
SCUBE3Q8IX30 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC7.44□□□□□ -1.22
SCUBE3Q8IX30 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC7.44□□□□□ -1.22
SCUBE3Q8IX30 AC068831.4-201ENST00000556118 109 ntBASIC7.44□□□□□ -1.22
SCUBE3Q8IX30 NR2F2-AS1-209ENST00000560800 549 ntTSL 4 BASIC7.44□□□□□ -1.22
SCUBE3Q8IX30 IDH3A-223ENST00000561366 389 ntTSL 3 BASIC7.44□□□□□ -1.22
SCUBE3Q8IX30 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC7.44□□□□□ -1.22
SCUBE3Q8IX30 AC138811.1-201ENST00000569096 361 ntTSL 3 BASIC7.44□□□□□ -1.22
SCUBE3Q8IX30 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC7.44□□□□□ -1.22
SCUBE3Q8IX30 AC010463.3-201ENST00000594077 500 ntBASIC7.44□□□□□ -1.22
SCUBE3Q8IX30 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC7.44□□□□□ -1.22
SCUBE3Q8IX30 CYP2C8-213ENST00000628935 924 ntTSL 5 BASIC7.44□□□□□ -1.22
SCUBE3Q8IX30 CASC19-232ENST00000641480 1244 ntBASIC7.44□□□□□ -1.22
SCUBE3Q8IX30 CDH18-205ENST00000506372 2432 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
SCUBE3Q8IX30 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC7.44□□□□□ -1.22
SCUBE3Q8IX30 FBLN5-205ENST00000556154 1875 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
SCUBE3Q8IX30 AC011592.1-201ENST00000624647 3634 ntBASIC7.44□□□□□ -1.22
SCUBE3Q8IX30 AP3M1-201ENST00000355264 5124 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
SCUBE3Q8IX30 OR52K1-202ENST00000641528 5456 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
SCUBE3Q8IX30 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC7.44□□□□□ -1.22
SCUBE3Q8IX30 DPPA4-201ENST00000335658 2817 ntAPPRIS P2 TSL 1 (best) BASIC7.44□□□□□ -1.22
SCUBE3Q8IX30 CCDC152-201ENST00000361970 3431 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
SCUBE3Q8IX30 EIF4G2-208ENST00000526148 4001 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
SCUBE3Q8IX30 ZNF407-202ENST00000309902 5595 ntTSL 2 BASIC7.44□□□□□ -1.22
SCUBE3Q8IX30 ZMYND11-204ENST00000381604 4066 ntTSL 5 BASIC7.44□□□□□ -1.22
SCUBE3Q8IX30 ZNF761-202ENST00000432094 4061 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
SCUBE3Q8IX30 TC2N-202ENST00000360594 3751 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
SCUBE3Q8IX30 NUSAP1-202ENST00000414849 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
SCUBE3Q8IX30 MITF-206ENST00000394351 1956 ntAPPRIS P3 TSL 1 (best) BASIC7.44□□□□□ -1.22
SCUBE3Q8IX30 USP1-202ENST00000371146 3507 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
SCUBE3Q8IX30 HRG-201ENST00000232003 2015 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
SCUBE3Q8IX30 AC114546.3-201ENST00000623582 1734 ntBASIC7.44□□□□□ -1.22
SCUBE3Q8IX30 INTS2-207ENST00000617492 5805 ntTSL 5 BASIC7.44□□□□□ -1.22
SCUBE3Q8IX30 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC7.44□□□□□ -1.22
SCUBE3Q8IX30 KIAA0232-202ENST00000425103 7771 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
SCUBE3Q8IX30 MAPRE2-203ENST00000436190 4323 ntTSL 2 BASIC7.43□□□□□ -1.22
SCUBE3Q8IX30 AL671511.1-201ENST00000425033 3458 ntTSL 2 BASIC7.43□□□□□ -1.22
SCUBE3Q8IX30 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC7.43□□□□□ -1.22
SCUBE3Q8IX30 QTRT2-212ENST00000485050 3844 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
SCUBE3Q8IX30 SIPA1L1-201ENST00000358550 6539 ntAPPRIS ALT1 TSL 2 BASIC7.43□□□□□ -1.22
SCUBE3Q8IX30 NAT1-206ENST00000518029 2162 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
SCUBE3Q8IX30 CACNA1D-224ENST00000637424 6856 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
SCUBE3Q8IX30 GDPD4-202ENST00000376217 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
SCUBE3Q8IX30 AP002800.1-201ENST00000624982 2225 ntBASIC7.43□□□□□ -1.22
SCUBE3Q8IX30 BEST3-212ENST00000553096 2929 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
SCUBE3Q8IX30 AL049780.3-201ENST00000624612 1583 ntBASIC7.43□□□□□ -1.22
SCUBE3Q8IX30 AC123769.2-201ENST00000624332 5984 ntBASIC7.43□□□□□ -1.22
SCUBE3Q8IX30 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
SCUBE3Q8IX30 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
SCUBE3Q8IX30 RN7SKP55-201ENST00000364888 307 ntBASIC7.43□□□□□ -1.22
SCUBE3Q8IX30 MIR514A2-201ENST00000385131 88 ntBASIC7.43□□□□□ -1.22
SCUBE3Q8IX30 MIR514A3-201ENST00000385132 88 ntBASIC7.43□□□□□ -1.22
SCUBE3Q8IX30 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
SCUBE3Q8IX30 MIR548F5-201ENST00000408421 86 ntBASIC7.43□□□□□ -1.22
SCUBE3Q8IX30 RPL37P10-201ENST00000412884 288 ntBASIC7.43□□□□□ -1.22
SCUBE3Q8IX30 RBMY2KP-201ENST00000418221 992 ntBASIC7.43□□□□□ -1.22
SCUBE3Q8IX30 RPL31P12-201ENST00000422587 358 ntBASIC7.43□□□□□ -1.22
SCUBE3Q8IX30 AL669831.1-202ENST00000428504 417 ntBASIC7.43□□□□□ -1.22
SCUBE3Q8IX30 AC099796.1-201ENST00000433377 683 ntTSL 3 BASIC7.43□□□□□ -1.22
SCUBE3Q8IX30 RPS3AP38-201ENST00000435889 763 ntBASIC7.43□□□□□ -1.22
SCUBE3Q8IX30 RPL30P15-201ENST00000457129 321 ntBASIC7.43□□□□□ -1.22
SCUBE3Q8IX30 RN7SL149P-201ENST00000465197 281 ntBASIC7.43□□□□□ -1.22
SCUBE3Q8IX30 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC7.43□□□□□ -1.22
SCUBE3Q8IX30 AC091965.3-201ENST00000506236 208 ntBASIC7.43□□□□□ -1.22
SCUBE3Q8IX30 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC7.43□□□□□ -1.22
SCUBE3Q8IX30 LINC01950-202ENST00000513273 572 ntTSL 2 BASIC7.43□□□□□ -1.22
SCUBE3Q8IX30 SCARNA6-201ENST00000515982 265 ntBASIC7.43□□□□□ -1.22
SCUBE3Q8IX30 RNU6-864P-201ENST00000516256 108 ntBASIC7.43□□□□□ -1.22
SCUBE3Q8IX30 NARSP2-201ENST00000518524 679 ntBASIC7.43□□□□□ -1.22
SCUBE3Q8IX30 AC105031.1-201ENST00000518550 476 ntBASIC7.43□□□□□ -1.22
SCUBE3Q8IX30 CASC11-203ENST00000519071 791 ntTSL 3 BASIC7.43□□□□□ -1.22
SCUBE3Q8IX30 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC7.43□□□□□ -1.22
SCUBE3Q8IX30 AC022616.3-201ENST00000523940 148 ntBASIC7.43□□□□□ -1.22
SCUBE3Q8IX30 AC107952.1-201ENST00000524200 376 ntBASIC7.43□□□□□ -1.22
SCUBE3Q8IX30 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
SCUBE3Q8IX30 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC7.43□□□□□ -1.22
SCUBE3Q8IX30 AC022509.1-203ENST00000541940 708 ntTSL 4 BASIC7.43□□□□□ -1.22
SCUBE3Q8IX30 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC7.43□□□□□ -1.22
SCUBE3Q8IX30 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC7.43□□□□□ -1.22
SCUBE3Q8IX30 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC7.43□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms