Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC5.25□□□□□ -1.57
SCN4BQ8IWT1 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC5.25□□□□□ -1.57
SCN4BQ8IWT1 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.25□□□□□ -1.57
SCN4BQ8IWT1 RN7SL622P-201ENST00000585292 275 ntBASIC5.25□□□□□ -1.57
SCN4BQ8IWT1 AC124856.1-201ENST00000600819 896 ntBASIC5.25□□□□□ -1.57
SCN4BQ8IWT1 BNIP3P38-201ENST00000601117 544 ntBASIC5.25□□□□□ -1.57
SCN4BQ8IWT1 RPP40P2-201ENST00000603596 712 ntBASIC5.25□□□□□ -1.57
SCN4BQ8IWT1 AP001521.2-201ENST00000608772 546 ntBASIC5.25□□□□□ -1.57
SCN4BQ8IWT1 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC5.25□□□□□ -1.57
SCN4BQ8IWT1 AC011472.4-201ENST00000615848 491 ntBASIC5.25□□□□□ -1.57
SCN4BQ8IWT1 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SCN4BQ8IWT1 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.25□□□□□ -1.57
SCN4BQ8IWT1 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SCN4BQ8IWT1 AC017007.4-201ENST00000503353 1352 ntBASIC5.25□□□□□ -1.57
SCN4BQ8IWT1 AP000542.2-201ENST00000623199 6179 ntBASIC5.25□□□□□ -1.57
SCN4BQ8IWT1 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SCN4BQ8IWT1 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SCN4BQ8IWT1 SAMMSON-226ENST00000642089 1582 ntBASIC5.25□□□□□ -1.57
SCN4BQ8IWT1 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.25□□□□□ -1.57
SCN4BQ8IWT1 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.25□□□□□ -1.57
SCN4BQ8IWT1 ADAM24P-201ENST00000398655 2101 ntBASIC5.24□□□□□ -1.57
SCN4BQ8IWT1 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SCN4BQ8IWT1 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.24□□□□□ -1.57
SCN4BQ8IWT1 AC109446.4-201ENST00000623235 2755 ntBASIC5.24□□□□□ -1.57
SCN4BQ8IWT1 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SCN4BQ8IWT1 AC233289.1-201ENST00000403700 508 ntBASIC5.24□□□□□ -1.57
SCN4BQ8IWT1 U3.32-201ENST00000408116 212 ntBASIC5.24□□□□□ -1.57
SCN4BQ8IWT1 GNG5P5-201ENST00000420444 220 ntBASIC5.24□□□□□ -1.57
SCN4BQ8IWT1 TEX41-203ENST00000420472 765 ntTSL 3 BASIC5.24□□□□□ -1.57
SCN4BQ8IWT1 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC5.24□□□□□ -1.57
SCN4BQ8IWT1 AC000041.1-201ENST00000439655 175 ntBASIC5.24□□□□□ -1.57
SCN4BQ8IWT1 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC5.24□□□□□ -1.57
SCN4BQ8IWT1 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC5.24□□□□□ -1.57
SCN4BQ8IWT1 NDUFAF4P2-201ENST00000445374 520 ntBASIC5.24□□□□□ -1.57
SCN4BQ8IWT1 AL031313.1-201ENST00000448435 256 ntBASIC5.24□□□□□ -1.57
SCN4BQ8IWT1 EXOSC3P1-201ENST00000448649 500 ntBASIC5.24□□□□□ -1.57
SCN4BQ8IWT1 AL591363.1-201ENST00000450091 483 ntBASIC5.24□□□□□ -1.57
SCN4BQ8IWT1 RPL10P17-201ENST00000453852 316 ntBASIC5.24□□□□□ -1.57
SCN4BQ8IWT1 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC5.24□□□□□ -1.57
SCN4BQ8IWT1 RN7SL441P-201ENST00000492388 296 ntBASIC5.24□□□□□ -1.57
SCN4BQ8IWT1 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC5.24□□□□□ -1.57
SCN4BQ8IWT1 OR7H2P-201ENST00000513483 306 ntBASIC5.24□□□□□ -1.57
SCN4BQ8IWT1 SNORA19.3-201ENST00000516165 130 ntBASIC5.24□□□□□ -1.57
SCN4BQ8IWT1 AC091163.3-201ENST00000518269 1144 ntBASIC5.24□□□□□ -1.57
SCN4BQ8IWT1 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC5.24□□□□□ -1.57
SCN4BQ8IWT1 MORF4L1P3-201ENST00000525966 950 ntBASIC5.24□□□□□ -1.57
SCN4BQ8IWT1 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC5.24□□□□□ -1.57
SCN4BQ8IWT1 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SCN4BQ8IWT1 AC008083.2-201ENST00000546707 476 ntBASIC5.24□□□□□ -1.57
SCN4BQ8IWT1 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC5.24□□□□□ -1.57
SCN4BQ8IWT1 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC5.24□□□□□ -1.57
SCN4BQ8IWT1 TVP23CP2-201ENST00000571473 623 ntBASIC5.24□□□□□ -1.57
SCN4BQ8IWT1 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC5.24□□□□□ -1.57
SCN4BQ8IWT1 MIR4789-201ENST00000577469 82 ntBASIC5.24□□□□□ -1.57
SCN4BQ8IWT1 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC5.24□□□□□ -1.57
SCN4BQ8IWT1 AC112220.2-201ENST00000605513 533 ntBASIC5.24□□□□□ -1.57
SCN4BQ8IWT1 AL136295.6-201ENST00000610486 658 ntBASIC5.24□□□□□ -1.57
SCN4BQ8IWT1 AC109809.1-201ENST00000619665 545 ntBASIC5.24□□□□□ -1.57
SCN4BQ8IWT1 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC5.24□□□□□ -1.57
SCN4BQ8IWT1 AP001005.3-201ENST00000622049 129 ntBASIC5.24□□□□□ -1.57
SCN4BQ8IWT1 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
SCN4BQ8IWT1 HSPA8P14-201ENST00000552265 1805 ntBASIC5.24□□□□□ -1.57
SCN4BQ8IWT1 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SCN4BQ8IWT1 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SCN4BQ8IWT1 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.24□□□□□ -1.57
SCN4BQ8IWT1 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
SCN4BQ8IWT1 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
SCN4BQ8IWT1 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
SCN4BQ8IWT1 ECM1P2-201ENST00000503354 1577 ntBASIC5.24□□□□□ -1.57
SCN4BQ8IWT1 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.24□□□□□ -1.57
SCN4BQ8IWT1 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
SCN4BQ8IWT1 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.23□□□□□ -1.57
SCN4BQ8IWT1 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
SCN4BQ8IWT1 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SCN4BQ8IWT1 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.23□□□□□ -1.57
SCN4BQ8IWT1 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.23□□□□□ -1.57
SCN4BQ8IWT1 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SCN4BQ8IWT1 RNA5SP191-201ENST00000362585 102 ntBASIC5.23□□□□□ -1.57
SCN4BQ8IWT1 RNU5B-1-201ENST00000363286 116 ntBASIC5.23□□□□□ -1.57
SCN4BQ8IWT1 RNU6-452P-201ENST00000384406 107 ntBASIC5.23□□□□□ -1.57
SCN4BQ8IWT1 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
SCN4BQ8IWT1 RPS27AP11-201ENST00000402798 447 ntBASIC5.23□□□□□ -1.57
SCN4BQ8IWT1 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC5.23□□□□□ -1.57
SCN4BQ8IWT1 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC5.23□□□□□ -1.57
SCN4BQ8IWT1 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC5.23□□□□□ -1.57
SCN4BQ8IWT1 MTCO1P53-201ENST00000441633 699 ntBASIC5.23□□□□□ -1.57
SCN4BQ8IWT1 AL009048.1-201ENST00000450437 298 ntBASIC5.23□□□□□ -1.57
SCN4BQ8IWT1 AL691482.1-201ENST00000453255 87 ntBASIC5.23□□□□□ -1.57
SCN4BQ8IWT1 AL354710.1-201ENST00000453641 246 ntBASIC5.23□□□□□ -1.57
SCN4BQ8IWT1 CBX1P2-201ENST00000453841 458 ntBASIC5.23□□□□□ -1.57
SCN4BQ8IWT1 GTF2IP12-201ENST00000456547 356 ntBASIC5.23□□□□□ -1.57
SCN4BQ8IWT1 RPL7AP52-201ENST00000458096 790 ntBASIC5.23□□□□□ -1.57
SCN4BQ8IWT1 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SCN4BQ8IWT1 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.23□□□□□ -1.57
SCN4BQ8IWT1 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC5.23□□□□□ -1.57
SCN4BQ8IWT1 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC5.23□□□□□ -1.57
SCN4BQ8IWT1 GAPDHP56-201ENST00000506031 988 ntBASIC5.23□□□□□ -1.57
SCN4BQ8IWT1 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC5.23□□□□□ -1.57
SCN4BQ8IWT1 AC100784.1-201ENST00000522790 310 ntBASIC5.23□□□□□ -1.57
SCN4BQ8IWT1 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms