Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 AC139783.2-201ENST00000504847 1145 ntBASIC4.74□□□□□ -1.65
CCDC50Q8IVM0 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.74□□□□□ -1.65
CCDC50Q8IVM0 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.74□□□□□ -1.65
CCDC50Q8IVM0 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC4.74□□□□□ -1.65
CCDC50Q8IVM0 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.74□□□□□ -1.65
CCDC50Q8IVM0 AC016180.1-201ENST00000567945 403 ntBASIC4.74□□□□□ -1.65
CCDC50Q8IVM0 MIR4436B2-201ENST00000581415 91 ntBASIC4.74□□□□□ -1.65
CCDC50Q8IVM0 MIR4436B1-201ENST00000583272 91 ntBASIC4.74□□□□□ -1.65
CCDC50Q8IVM0 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC4.74□□□□□ -1.65
CCDC50Q8IVM0 AC023762.1-201ENST00000603280 584 ntBASIC4.74□□□□□ -1.65
CCDC50Q8IVM0 AC015922.4-201ENST00000612568 690 ntBASIC4.74□□□□□ -1.65
CCDC50Q8IVM0 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC4.74□□□□□ -1.65
CCDC50Q8IVM0 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CCDC50Q8IVM0 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CCDC50Q8IVM0 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
CCDC50Q8IVM0 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CCDC50Q8IVM0 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CCDC50Q8IVM0 RLIMP2-201ENST00000427891 1563 ntBASIC4.74□□□□□ -1.65
CCDC50Q8IVM0 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
CCDC50Q8IVM0 AC010928.1-201ENST00000592477 1447 ntBASIC4.73□□□□□ -1.65
CCDC50Q8IVM0 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.73□□□□□ -1.65
CCDC50Q8IVM0 ADIG-201ENST00000373348 430 ntTSL 2 BASIC4.73□□□□□ -1.65
CCDC50Q8IVM0 RNU1-44P-201ENST00000384453 163 ntBASIC4.73□□□□□ -1.65
CCDC50Q8IVM0 AL512430.2-201ENST00000406786 339 ntBASIC4.73□□□□□ -1.65
CCDC50Q8IVM0 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.73□□□□□ -1.65
CCDC50Q8IVM0 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CCDC50Q8IVM0 SLC9B1P4-201ENST00000421957 1288 ntBASIC4.73□□□□□ -1.65
CCDC50Q8IVM0 ARAFP1-201ENST00000422172 605 ntBASIC4.73□□□□□ -1.65
CCDC50Q8IVM0 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.73□□□□□ -1.65
CCDC50Q8IVM0 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC4.73□□□□□ -1.65
CCDC50Q8IVM0 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.73□□□□□ -1.65
CCDC50Q8IVM0 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC4.73□□□□□ -1.65
CCDC50Q8IVM0 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.73□□□□□ -1.65
CCDC50Q8IVM0 AC147055.1-201ENST00000509261 750 ntBASIC4.73□□□□□ -1.65
CCDC50Q8IVM0 AC007016.1-201ENST00000512110 244 ntBASIC4.73□□□□□ -1.65
CCDC50Q8IVM0 UBE2Q2P10-201ENST00000514854 900 ntBASIC4.73□□□□□ -1.65
CCDC50Q8IVM0 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CCDC50Q8IVM0 IFITM8P-201ENST00000522529 394 ntBASIC4.73□□□□□ -1.65
CCDC50Q8IVM0 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC4.73□□□□□ -1.65
CCDC50Q8IVM0 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC4.73□□□□□ -1.65
CCDC50Q8IVM0 TRAV11-201ENST00000539512 339 ntBASIC4.73□□□□□ -1.65
CCDC50Q8IVM0 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.73□□□□□ -1.65
CCDC50Q8IVM0 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC4.73□□□□□ -1.65
CCDC50Q8IVM0 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.73□□□□□ -1.65
CCDC50Q8IVM0 CD24P2-201ENST00000565486 219 ntBASIC4.73□□□□□ -1.65
CCDC50Q8IVM0 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.73□□□□□ -1.65
CCDC50Q8IVM0 MIR4646-201ENST00000580775 63 ntBASIC4.73□□□□□ -1.65
CCDC50Q8IVM0 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC4.73□□□□□ -1.65
CCDC50Q8IVM0 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4.73□□□□□ -1.65
CCDC50Q8IVM0 FAM60CP-201ENST00000591086 664 ntBASIC4.73□□□□□ -1.65
CCDC50Q8IVM0 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.73□□□□□ -1.65
CCDC50Q8IVM0 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.73□□□□□ -1.65
CCDC50Q8IVM0 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
CCDC50Q8IVM0 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC4.73□□□□□ -1.65
CCDC50Q8IVM0 DDX18P3-201ENST00000404856 2007 ntBASIC4.72□□□□□ -1.65
CCDC50Q8IVM0 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
CCDC50Q8IVM0 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
CCDC50Q8IVM0 MIR323B-201ENST00000385269 82 ntBASIC4.72□□□□□ -1.65
CCDC50Q8IVM0 VN1R8P-201ENST00000407739 893 ntBASIC4.72□□□□□ -1.65
CCDC50Q8IVM0 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC4.72□□□□□ -1.65
CCDC50Q8IVM0 AC104837.2-201ENST00000427236 424 ntBASIC4.72□□□□□ -1.65
CCDC50Q8IVM0 ELOCP18-201ENST00000434209 337 ntBASIC4.72□□□□□ -1.65
CCDC50Q8IVM0 AC008072.1-201ENST00000434254 824 ntBASIC4.72□□□□□ -1.65
CCDC50Q8IVM0 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CCDC50Q8IVM0 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC4.72□□□□□ -1.65
CCDC50Q8IVM0 RPL31P44-201ENST00000447680 377 ntBASIC4.72□□□□□ -1.65
CCDC50Q8IVM0 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CCDC50Q8IVM0 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CCDC50Q8IVM0 RPS3AP41-201ENST00000462701 778 ntBASIC4.72□□□□□ -1.65
CCDC50Q8IVM0 AC090013.1-201ENST00000485147 480 ntBASIC4.72□□□□□ -1.65
CCDC50Q8IVM0 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
CCDC50Q8IVM0 AC091917.2-201ENST00000505002 744 ntBASIC4.72□□□□□ -1.65
CCDC50Q8IVM0 OR7H2P-201ENST00000513483 306 ntBASIC4.72□□□□□ -1.65
CCDC50Q8IVM0 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC4.72□□□□□ -1.65
CCDC50Q8IVM0 OR5M7P-201ENST00000526140 972 ntBASIC4.72□□□□□ -1.65
CCDC50Q8IVM0 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
CCDC50Q8IVM0 AP000676.2-201ENST00000529711 301 ntBASIC4.72□□□□□ -1.65
CCDC50Q8IVM0 CYP4A43P-201ENST00000568156 121 ntBASIC4.72□□□□□ -1.65
CCDC50Q8IVM0 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC4.72□□□□□ -1.65
CCDC50Q8IVM0 MIR3934-201ENST00000579806 107 ntBASIC4.72□□□□□ -1.65
CCDC50Q8IVM0 NPM1P45-201ENST00000583151 559 ntBASIC4.72□□□□□ -1.65
CCDC50Q8IVM0 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC4.72□□□□□ -1.65
CCDC50Q8IVM0 AL133338.2-201ENST00000604292 736 ntBASIC4.72□□□□□ -1.65
CCDC50Q8IVM0 AL139286.1-201ENST00000604465 483 ntBASIC4.72□□□□□ -1.65
CCDC50Q8IVM0 GMCL1P2-201ENST00000605230 823 ntBASIC4.72□□□□□ -1.65
CCDC50Q8IVM0 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC4.72□□□□□ -1.65
CCDC50Q8IVM0 AC004241.3-201ENST00000611728 517 ntBASIC4.72□□□□□ -1.65
CCDC50Q8IVM0 AL353726.1-201ENST00000614041 1000 ntBASIC4.72□□□□□ -1.65
CCDC50Q8IVM0 AC107905.1-201ENST00000616204 426 ntBASIC4.72□□□□□ -1.65
CCDC50Q8IVM0 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.72□□□□□ -1.65
CCDC50Q8IVM0 AP002967.1-201ENST00000624203 539 ntBASIC4.72□□□□□ -1.65
CCDC50Q8IVM0 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.72□□□□□ -1.65
CCDC50Q8IVM0 AC131971.1-201ENST00000332881 1482 ntBASIC4.72□□□□□ -1.65
CCDC50Q8IVM0 SDAD1P1-202ENST00000524156 2051 ntBASIC4.72□□□□□ -1.65
CCDC50Q8IVM0 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.71□□□□□ -1.65
CCDC50Q8IVM0 AC006971.1-201ENST00000407916 4486 ntBASIC4.71□□□□□ -1.66
CCDC50Q8IVM0 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.71□□□□□ -1.66
CCDC50Q8IVM0 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC4.71□□□□□ -1.66
CCDC50Q8IVM0 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.71□□□□□ -1.66
CCDC50Q8IVM0 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms