Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC6.7□□□□□ -1.34
NPAS4Q8IUM7 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC6.7□□□□□ -1.34
NPAS4Q8IUM7 HDAC1P2-201ENST00000453661 1398 ntBASIC6.69□□□□□ -1.34
NPAS4Q8IUM7 MTND4P16-201ENST00000466108 1367 ntBASIC6.69□□□□□ -1.34
NPAS4Q8IUM7 AF287957.1-201ENST00000607368 1595 ntBASIC6.69□□□□□ -1.34
NPAS4Q8IUM7 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC6.69□□□□□ -1.34
NPAS4Q8IUM7 AC027228.2-201ENST00000567141 2154 ntBASIC6.69□□□□□ -1.34
NPAS4Q8IUM7 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
NPAS4Q8IUM7 COG2-209ENST00000534989 2963 ntTSL 2 BASIC6.69□□□□□ -1.34
NPAS4Q8IUM7 AC092724.1-201ENST00000624623 3397 ntBASIC6.69□□□□□ -1.34
NPAS4Q8IUM7 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
NPAS4Q8IUM7 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
NPAS4Q8IUM7 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
NPAS4Q8IUM7 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
NPAS4Q8IUM7 SYT4-201ENST00000255224 4110 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
NPAS4Q8IUM7 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC6.69□□□□□ -1.34
NPAS4Q8IUM7 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
NPAS4Q8IUM7 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC6.69□□□□□ -1.34
NPAS4Q8IUM7 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
NPAS4Q8IUM7 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
NPAS4Q8IUM7 OR2AG2-202ENST00000641124 4224 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
NPAS4Q8IUM7 OR2AG2-203ENST00000641169 4221 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
NPAS4Q8IUM7 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC6.69□□□□□ -1.34
NPAS4Q8IUM7 OR9G4-201ENST00000302957 984 ntBASIC6.69□□□□□ -1.34
NPAS4Q8IUM7 HEPACAM2-201ENST00000341723 2122 ntAPPRIS P3 TSL 1 (best) BASIC6.69□□□□□ -1.34
NPAS4Q8IUM7 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
NPAS4Q8IUM7 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
NPAS4Q8IUM7 MIR1203-201ENST00000408812 85 ntBASIC6.69□□□□□ -1.34
NPAS4Q8IUM7 RNU2-50P-201ENST00000410494 143 ntBASIC6.69□□□□□ -1.34
NPAS4Q8IUM7 RNU2-66P-201ENST00000410650 161 ntBASIC6.69□□□□□ -1.34
NPAS4Q8IUM7 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC6.69□□□□□ -1.34
NPAS4Q8IUM7 AL139128.1-201ENST00000413921 941 ntBASIC6.69□□□□□ -1.34
NPAS4Q8IUM7 AL035660.1-201ENST00000422041 222 ntBASIC6.69□□□□□ -1.34
NPAS4Q8IUM7 RPS27AP7-201ENST00000422792 455 ntBASIC6.69□□□□□ -1.34
NPAS4Q8IUM7 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC6.69□□□□□ -1.34
NPAS4Q8IUM7 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC6.69□□□□□ -1.34
NPAS4Q8IUM7 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC6.69□□□□□ -1.34
NPAS4Q8IUM7 HNRNPA1P18-201ENST00000433537 927 ntBASIC6.69□□□□□ -1.34
NPAS4Q8IUM7 VN1R54P-201ENST00000435210 1049 ntBASIC6.69□□□□□ -1.34
NPAS4Q8IUM7 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC6.69□□□□□ -1.34
NPAS4Q8IUM7 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC6.69□□□□□ -1.34
NPAS4Q8IUM7 VN1R34P-201ENST00000447387 883 ntBASIC6.69□□□□□ -1.34
NPAS4Q8IUM7 RPL39P6-201ENST00000448289 150 ntBASIC6.69□□□□□ -1.34
NPAS4Q8IUM7 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC6.69□□□□□ -1.34
NPAS4Q8IUM7 MEMO1P3-201ENST00000459811 302 ntBASIC6.69□□□□□ -1.34
NPAS4Q8IUM7 NPM1P27-201ENST00000502784 830 ntBASIC6.69□□□□□ -1.34
NPAS4Q8IUM7 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC6.69□□□□□ -1.34
NPAS4Q8IUM7 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC6.69□□□□□ -1.34
NPAS4Q8IUM7 RNU6-150P-201ENST00000516237 95 ntBASIC6.69□□□□□ -1.34
NPAS4Q8IUM7 AC025881.1-201ENST00000518851 512 ntBASIC6.69□□□□□ -1.34
NPAS4Q8IUM7 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC6.69□□□□□ -1.34
NPAS4Q8IUM7 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC6.69□□□□□ -1.34
NPAS4Q8IUM7 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
NPAS4Q8IUM7 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
NPAS4Q8IUM7 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
NPAS4Q8IUM7 NMNAT1P1-201ENST00000554095 876 ntBASIC6.69□□□□□ -1.34
NPAS4Q8IUM7 AC090515.3-201ENST00000560431 315 ntBASIC6.69□□□□□ -1.34
NPAS4Q8IUM7 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC6.69□□□□□ -1.34
NPAS4Q8IUM7 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC6.69□□□□□ -1.34
NPAS4Q8IUM7 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC6.69□□□□□ -1.34
NPAS4Q8IUM7 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC6.69□□□□□ -1.34
NPAS4Q8IUM7 AC006924.1-201ENST00000610750 559 ntBASIC6.69□□□□□ -1.34
NPAS4Q8IUM7 MIR6809-201ENST00000612189 116 ntBASIC6.69□□□□□ -1.34
NPAS4Q8IUM7 AL589743.7-201ENST00000612637 233 ntBASIC6.69□□□□□ -1.34
NPAS4Q8IUM7 AC104985.2-201ENST00000620598 500 ntBASIC6.69□□□□□ -1.34
NPAS4Q8IUM7 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC6.69□□□□□ -1.34
NPAS4Q8IUM7 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC6.69□□□□□ -1.34
NPAS4Q8IUM7 AL359922.2-201ENST00000581788 3017 ntBASIC6.69□□□□□ -1.34
NPAS4Q8IUM7 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
NPAS4Q8IUM7 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC6.69□□□□□ -1.34
NPAS4Q8IUM7 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
NPAS4Q8IUM7 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC6.69□□□□□ -1.34
NPAS4Q8IUM7 DCAF13P1-201ENST00000495256 1330 ntBASIC6.69□□□□□ -1.34
NPAS4Q8IUM7 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
NPAS4Q8IUM7 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
NPAS4Q8IUM7 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC6.69□□□□□ -1.34
NPAS4Q8IUM7 NLRP3P1-201ENST00000622303 1785 ntBASIC6.69□□□□□ -1.34
NPAS4Q8IUM7 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
NPAS4Q8IUM7 PDE6A-205ENST00000617647 4039 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
NPAS4Q8IUM7 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC6.69□□□□□ -1.34
NPAS4Q8IUM7 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
NPAS4Q8IUM7 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC6.69□□□□□ -1.34
NPAS4Q8IUM7 AC025809.2-201ENST00000625085 1802 ntBASIC6.69□□□□□ -1.34
NPAS4Q8IUM7 NCAPH-205ENST00000455200 2952 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
NPAS4Q8IUM7 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC6.69□□□□□ -1.34
NPAS4Q8IUM7 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
NPAS4Q8IUM7 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
NPAS4Q8IUM7 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
NPAS4Q8IUM7 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
NPAS4Q8IUM7 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC6.68□□□□□ -1.34
NPAS4Q8IUM7 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC6.68□□□□□ -1.34
NPAS4Q8IUM7 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
NPAS4Q8IUM7 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
NPAS4Q8IUM7 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC6.68□□□□□ -1.34
NPAS4Q8IUM7 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
NPAS4Q8IUM7 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
NPAS4Q8IUM7 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
NPAS4Q8IUM7 Y_RNA.303-201ENST00000364998 94 ntBASIC6.68□□□□□ -1.34
NPAS4Q8IUM7 snosnR66.1-201ENST00000391095 99 ntBASIC6.68□□□□□ -1.34
NPAS4Q8IUM7 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms