Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 AC104763.1-201ENST00000475274 360 ntBASIC4.29□□□□□ -1.72
H3F3CQ6NXT2 RPL23AP37-201ENST00000479658 549 ntBASIC4.29□□□□□ -1.72
H3F3CQ6NXT2 AC090686.1-201ENST00000481577 749 ntBASIC4.29□□□□□ -1.72
H3F3CQ6NXT2 PGBD4P4-201ENST00000509673 613 ntBASIC4.29□□□□□ -1.72
H3F3CQ6NXT2 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC4.29□□□□□ -1.72
H3F3CQ6NXT2 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
H3F3CQ6NXT2 AF186190.1-201ENST00000517470 480 ntBASIC4.29□□□□□ -1.72
H3F3CQ6NXT2 IGHV3-63-201ENST00000518422 341 ntBASIC4.29□□□□□ -1.72
H3F3CQ6NXT2 AP001781.1-201ENST00000530977 207 ntBASIC4.29□□□□□ -1.72
H3F3CQ6NXT2 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC4.29□□□□□ -1.72
H3F3CQ6NXT2 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC4.29□□□□□ -1.72
H3F3CQ6NXT2 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.29□□□□□ -1.72
H3F3CQ6NXT2 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.29□□□□□ -1.72
H3F3CQ6NXT2 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.29□□□□□ -1.72
H3F3CQ6NXT2 AC018552.3-201ENST00000567416 561 ntBASIC4.29□□□□□ -1.72
H3F3CQ6NXT2 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC4.29□□□□□ -1.72
H3F3CQ6NXT2 CYCSP40-201ENST00000575927 294 ntBASIC4.29□□□□□ -1.72
H3F3CQ6NXT2 RPL12P25-202ENST00000598100 674 ntBASIC4.29□□□□□ -1.72
H3F3CQ6NXT2 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.29□□□□□ -1.72
H3F3CQ6NXT2 AC008782.1-201ENST00000603386 430 ntBASIC4.29□□□□□ -1.72
H3F3CQ6NXT2 AC115286.1-201ENST00000604298 434 ntBASIC4.29□□□□□ -1.72
H3F3CQ6NXT2 AL356218.2-201ENST00000605264 187 ntBASIC4.29□□□□□ -1.72
H3F3CQ6NXT2 AC116447.1-201ENST00000613153 453 ntBASIC4.29□□□□□ -1.72
H3F3CQ6NXT2 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC4.29□□□□□ -1.72
H3F3CQ6NXT2 AL049536.1-201ENST00000625043 744 ntBASIC4.29□□□□□ -1.72
H3F3CQ6NXT2 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.29□□□□□ -1.72
H3F3CQ6NXT2 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
H3F3CQ6NXT2 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
H3F3CQ6NXT2 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
H3F3CQ6NXT2 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
H3F3CQ6NXT2 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
H3F3CQ6NXT2 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
H3F3CQ6NXT2 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.28□□□□□ -1.72
H3F3CQ6NXT2 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.28□□□□□ -1.72
H3F3CQ6NXT2 AL672167.1-205ENST00000641112 3080 ntBASIC4.28□□□□□ -1.72
H3F3CQ6NXT2 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
H3F3CQ6NXT2 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
H3F3CQ6NXT2 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.28□□□□□ -1.72
H3F3CQ6NXT2 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
H3F3CQ6NXT2 AC092079.1-201ENST00000558620 1985 ntBASIC4.28□□□□□ -1.72
H3F3CQ6NXT2 IL6STP1-201ENST00000346911 1020 ntBASIC4.28□□□□□ -1.72
H3F3CQ6NXT2 SNORA62-201ENST00000365493 153 ntBASIC4.28□□□□□ -1.72
H3F3CQ6NXT2 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.28□□□□□ -1.72
H3F3CQ6NXT2 GTF2IP2-201ENST00000424290 697 ntBASIC4.28□□□□□ -1.72
H3F3CQ6NXT2 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.28□□□□□ -1.72
H3F3CQ6NXT2 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.28□□□□□ -1.72
H3F3CQ6NXT2 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC4.28□□□□□ -1.72
H3F3CQ6NXT2 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.28□□□□□ -1.72
H3F3CQ6NXT2 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC4.28□□□□□ -1.72
H3F3CQ6NXT2 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC4.28□□□□□ -1.72
H3F3CQ6NXT2 MRPL48P1-201ENST00000445390 636 ntBASIC4.28□□□□□ -1.72
H3F3CQ6NXT2 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.28□□□□□ -1.72
H3F3CQ6NXT2 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC4.28□□□□□ -1.72
H3F3CQ6NXT2 RPL31P53-201ENST00000457065 348 ntBASIC4.28□□□□□ -1.72
H3F3CQ6NXT2 PPIAP21-201ENST00000464473 501 ntBASIC4.28□□□□□ -1.72
H3F3CQ6NXT2 RPL7AP28-201ENST00000464513 571 ntBASIC4.28□□□□□ -1.72
H3F3CQ6NXT2 NDUFA5P9-201ENST00000472609 340 ntBASIC4.28□□□□□ -1.72
H3F3CQ6NXT2 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.28□□□□□ -1.72
H3F3CQ6NXT2 AP000926.3-201ENST00000497201 299 ntBASIC4.28□□□□□ -1.72
H3F3CQ6NXT2 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
H3F3CQ6NXT2 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.28□□□□□ -1.72
H3F3CQ6NXT2 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.28□□□□□ -1.72
H3F3CQ6NXT2 AC009643.1-201ENST00000532030 391 ntBASIC4.28□□□□□ -1.72
H3F3CQ6NXT2 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC4.28□□□□□ -1.72
H3F3CQ6NXT2 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC4.28□□□□□ -1.72
H3F3CQ6NXT2 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
H3F3CQ6NXT2 AC068446.3-201ENST00000555285 382 ntBASIC4.28□□□□□ -1.72
H3F3CQ6NXT2 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.28□□□□□ -1.72
H3F3CQ6NXT2 AC068714.1-201ENST00000559623 800 ntBASIC4.28□□□□□ -1.72
H3F3CQ6NXT2 HMGB3P26-201ENST00000560051 582 ntBASIC4.28□□□□□ -1.72
H3F3CQ6NXT2 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
H3F3CQ6NXT2 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.28□□□□□ -1.72
H3F3CQ6NXT2 AL133370.2-201ENST00000619934 439 ntBASIC4.28□□□□□ -1.72
H3F3CQ6NXT2 AC002044.3-201ENST00000623314 541 ntBASIC4.28□□□□□ -1.72
H3F3CQ6NXT2 BMS1P21-201ENST00000634565 365 ntBASIC4.28□□□□□ -1.72
H3F3CQ6NXT2 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.28□□□□□ -1.72
H3F3CQ6NXT2 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
H3F3CQ6NXT2 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.28□□□□□ -1.72
H3F3CQ6NXT2 AC135352.1-201ENST00000506173 1418 ntBASIC4.28□□□□□ -1.72
H3F3CQ6NXT2 AC139713.2-214ENST00000642059 1811 ntBASIC4.28□□□□□ -1.72
H3F3CQ6NXT2 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
H3F3CQ6NXT2 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.27□□□□□ -1.73
H3F3CQ6NXT2 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
H3F3CQ6NXT2 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
H3F3CQ6NXT2 AL451142.2-201ENST00000429076 2090 ntBASIC4.27□□□□□ -1.73
H3F3CQ6NXT2 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
H3F3CQ6NXT2 AC021146.4-201ENST00000309229 279 ntBASIC4.27□□□□□ -1.73
H3F3CQ6NXT2 RNU4-39P-201ENST00000362455 127 ntBASIC4.27□□□□□ -1.73
H3F3CQ6NXT2 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
H3F3CQ6NXT2 AC136624.1-201ENST00000400791 413 ntBASIC4.27□□□□□ -1.73
H3F3CQ6NXT2 OR1F12-201ENST00000402365 945 ntBASIC4.27□□□□□ -1.73
H3F3CQ6NXT2 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
H3F3CQ6NXT2 CKS1BP6-201ENST00000424932 240 ntBASIC4.27□□□□□ -1.73
H3F3CQ6NXT2 AL732292.1-201ENST00000426692 226 ntBASIC4.27□□□□□ -1.73
H3F3CQ6NXT2 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4.27□□□□□ -1.73
H3F3CQ6NXT2 EIF2S2P2-201ENST00000447161 982 ntBASIC4.27□□□□□ -1.73
H3F3CQ6NXT2 CCRL1P1-201ENST00000449542 1053 ntBASIC4.27□□□□□ -1.73
H3F3CQ6NXT2 CALM1P2-201ENST00000452941 448 ntBASIC4.27□□□□□ -1.73
H3F3CQ6NXT2 METTL15P1-201ENST00000481421 1045 ntBASIC4.27□□□□□ -1.73
H3F3CQ6NXT2 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms