Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 MIR4666A-201ENST00000580160 79 ntBASIC7.88□□□□□ -1.15
RC3H1Q5TC82 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC7.88□□□□□ -1.15
RC3H1Q5TC82 AC243960.4-201ENST00000600532 288 ntBASIC7.88□□□□□ -1.15
RC3H1Q5TC82 AL953862.2-201ENST00000603089 820 ntBASIC7.88□□□□□ -1.15
RC3H1Q5TC82 TAS2R6P-201ENST00000605022 826 ntBASIC7.88□□□□□ -1.15
RC3H1Q5TC82 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC7.88□□□□□ -1.15
RC3H1Q5TC82 TEX41-265ENST00000627785 704 ntTSL 5 BASIC7.88□□□□□ -1.15
RC3H1Q5TC82 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC7.88□□□□□ -1.15
RC3H1Q5TC82 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC7.88□□□□□ -1.15
RC3H1Q5TC82 VPS13A-202ENST00000357409 9967 ntAPPRIS ALT2 TSL 1 (best) BASIC7.88□□□□□ -1.15
RC3H1Q5TC82 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC7.88□□□□□ -1.15
RC3H1Q5TC82 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
RC3H1Q5TC82 TIA1-201ENST00000282574 3823 ntTSL 5 BASIC7.88□□□□□ -1.15
RC3H1Q5TC82 TCL6-206ENST00000467865 3663 ntTSL 2 BASIC7.88□□□□□ -1.15
RC3H1Q5TC82 TMCO5A-205ENST00000559502 1939 ntAPPRIS ALT2 TSL 2 BASIC7.88□□□□□ -1.15
RC3H1Q5TC82 ACOT13-201ENST00000230048 4047 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
RC3H1Q5TC82 KCNMA1-266ENST00000639601 11920 ntAPPRIS ALT2 TSL 5 BASIC7.87□□□□□ -1.15
RC3H1Q5TC82 CACNB4-225ENST00000636442 4232 ntTSL 5 BASIC7.87□□□□□ -1.15
RC3H1Q5TC82 NRCAM-201ENST00000351718 6228 ntAPPRIS P3 TSL 1 (best) BASIC7.87□□□□□ -1.15
RC3H1Q5TC82 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC7.87□□□□□ -1.15
RC3H1Q5TC82 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
RC3H1Q5TC82 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC7.87□□□□□ -1.15
RC3H1Q5TC82 GRIK2-206ENST00000413795 4876 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
RC3H1Q5TC82 MYO6-202ENST00000369977 5597 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
RC3H1Q5TC82 DNA2-203ENST00000399180 3207 ntTSL 2 BASIC7.87□□□□□ -1.15
RC3H1Q5TC82 CSMD2-210ENST00000619121 13430 ntAPPRIS ALT2 TSL 5 BASIC7.87□□□□□ -1.15
RC3H1Q5TC82 OR56B1-201ENST00000317121 2075 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
RC3H1Q5TC82 ABLIM1-214ENST00000533213 7606 ntTSL 5 BASIC7.87□□□□□ -1.15
RC3H1Q5TC82 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
RC3H1Q5TC82 MTMR7-201ENST00000180173 3850 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
RC3H1Q5TC82 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
RC3H1Q5TC82 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC7.87□□□□□ -1.15
RC3H1Q5TC82 SNORA4.3-201ENST00000365564 137 ntBASIC7.87□□□□□ -1.15
RC3H1Q5TC82 RNU6-575P-201ENST00000411326 105 ntBASIC7.87□□□□□ -1.15
RC3H1Q5TC82 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC7.87□□□□□ -1.15
RC3H1Q5TC82 OR1AA1P-201ENST00000419597 916 ntBASIC7.87□□□□□ -1.15
RC3H1Q5TC82 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC7.87□□□□□ -1.15
RC3H1Q5TC82 RPS27AP14-201ENST00000422868 454 ntBASIC7.87□□□□□ -1.15
RC3H1Q5TC82 AL356583.2-201ENST00000426536 280 ntBASIC7.87□□□□□ -1.15
RC3H1Q5TC82 YWHAEP5-201ENST00000431545 765 ntBASIC7.87□□□□□ -1.15
RC3H1Q5TC82 AL365400.1-201ENST00000431854 640 ntBASIC7.87□□□□□ -1.15
RC3H1Q5TC82 AL358934.1-201ENST00000432346 324 ntBASIC7.87□□□□□ -1.15
RC3H1Q5TC82 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC7.87□□□□□ -1.15
RC3H1Q5TC82 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC7.87□□□□□ -1.15
RC3H1Q5TC82 AL445466.1-201ENST00000448432 357 ntBASIC7.87□□□□□ -1.15
RC3H1Q5TC82 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC7.87□□□□□ -1.15
RC3H1Q5TC82 AC002456.2-201ENST00000509356 380 ntBASIC7.87□□□□□ -1.15
RC3H1Q5TC82 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC7.87□□□□□ -1.15
RC3H1Q5TC82 WBP1LP3-201ENST00000523033 208 ntBASIC7.87□□□□□ -1.15
RC3H1Q5TC82 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC7.87□□□□□ -1.15
RC3H1Q5TC82 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC7.87□□□□□ -1.15
RC3H1Q5TC82 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC7.87□□□□□ -1.15
RC3H1Q5TC82 AC119044.1-202ENST00000548463 339 ntTSL 2 BASIC7.87□□□□□ -1.15
RC3H1Q5TC82 MYL6-213ENST00000549017 502 ntTSL 3 BASIC7.87□□□□□ -1.15
RC3H1Q5TC82 AC010547.6-201ENST00000571789 193 ntBASIC7.87□□□□□ -1.15
RC3H1Q5TC82 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC7.87□□□□□ -1.15
RC3H1Q5TC82 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC7.87□□□□□ -1.15
RC3H1Q5TC82 AC243756.2-201ENST00000618406 463 ntBASIC7.87□□□□□ -1.15
RC3H1Q5TC82 AC069234.4-201ENST00000621276 412 ntBASIC7.87□□□□□ -1.15
RC3H1Q5TC82 SLC12A6-201ENST00000290209 7286 ntAPPRIS P3 TSL 1 (best) BASIC7.87□□□□□ -1.15
RC3H1Q5TC82 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC7.87□□□□□ -1.15
RC3H1Q5TC82 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC7.87□□□□□ -1.15
RC3H1Q5TC82 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC7.87□□□□□ -1.15
RC3H1Q5TC82 TEAD1-205ENST00000527575 3063 ntTSL 5 BASIC7.87□□□□□ -1.15
RC3H1Q5TC82 HYDIN-215ENST00000541601 3058 ntAPPRIS ALT2 TSL 2 BASIC7.87□□□□□ -1.15
RC3H1Q5TC82 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
RC3H1Q5TC82 MTURN-202ENST00000324489 5605 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
RC3H1Q5TC82 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
RC3H1Q5TC82 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
RC3H1Q5TC82 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC7.86□□□□□ -1.15
RC3H1Q5TC82 AL031651.1-201ENST00000615357 1438 ntBASIC7.86□□□□□ -1.15
RC3H1Q5TC82 OR2T2-203ENST00000642130 3331 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
RC3H1Q5TC82 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC7.86□□□□□ -1.15
RC3H1Q5TC82 VTI1A-201ENST00000393077 4131 ntAPPRIS P1 TSL 2 BASIC7.86□□□□□ -1.15
RC3H1Q5TC82 LARP1BP1-201ENST00000506036 1359 ntBASIC7.86□□□□□ -1.15
RC3H1Q5TC82 ZRANB3-202ENST00000401392 6820 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
RC3H1Q5TC82 NAV2-203ENST00000396085 11000 ntAPPRIS P4 TSL 5 BASIC7.86□□□□□ -1.15
RC3H1Q5TC82 AC027088.4-201ENST00000611559 1947 ntBASIC7.86□□□□□ -1.15
RC3H1Q5TC82 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC7.86□□□□□ -1.15
RC3H1Q5TC82 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC7.86□□□□□ -1.15
RC3H1Q5TC82 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC7.86□□□□□ -1.15
RC3H1Q5TC82 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
RC3H1Q5TC82 Y_RNA.1-201ENST00000352915 104 ntBASIC7.86□□□□□ -1.15
RC3H1Q5TC82 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
RC3H1Q5TC82 Y_RNA.202-201ENST00000364083 110 ntBASIC7.86□□□□□ -1.15
RC3H1Q5TC82 RPS3AP36-201ENST00000398190 775 ntBASIC7.86□□□□□ -1.15
RC3H1Q5TC82 AL049693.1-201ENST00000402760 611 ntBASIC7.86□□□□□ -1.15
RC3H1Q5TC82 RNA5SP118-201ENST00000410385 109 ntBASIC7.86□□□□□ -1.15
RC3H1Q5TC82 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC7.86□□□□□ -1.15
RC3H1Q5TC82 JKAMPP1-201ENST00000413804 919 ntBASIC7.86□□□□□ -1.15
RC3H1Q5TC82 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC7.86□□□□□ -1.15
RC3H1Q5TC82 AC008753.1-201ENST00000423096 284 ntBASIC7.86□□□□□ -1.15
RC3H1Q5TC82 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
RC3H1Q5TC82 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC7.86□□□□□ -1.15
RC3H1Q5TC82 AL831737.1-201ENST00000441288 271 ntBASIC7.86□□□□□ -1.15
RC3H1Q5TC82 AC016691.1-201ENST00000441321 413 ntBASIC7.86□□□□□ -1.15
RC3H1Q5TC82 GAPDHP23-201ENST00000444823 993 ntBASIC7.86□□□□□ -1.15
RC3H1Q5TC82 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC7.86□□□□□ -1.15
RC3H1Q5TC82 AC005002.1-201ENST00000447458 540 ntBASIC7.86□□□□□ -1.15
RC3H1Q5TC82 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC7.86□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms