Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
H3F3AP84243 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
H3F3AP84243 MTND4P26-201ENST00000415971 1359 ntBASIC3.99□□□□□ -1.77
H3F3AP84243 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC3.99□□□□□ -1.77
H3F3AP84243 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC3.99□□□□□ -1.77
H3F3AP84243 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
H3F3AP84243 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
H3F3AP84243 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC3.99□□□□□ -1.77
H3F3AP84243 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
H3F3AP84243 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
H3F3AP84243 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
H3F3AP84243 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC3.98□□□□□ -1.77
H3F3AP84243 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
H3F3AP84243 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
H3F3AP84243 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
H3F3AP84243 SUPT16HP1-201ENST00000537175 3133 ntBASIC3.98□□□□□ -1.77
H3F3AP84243 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
H3F3AP84243 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC3.98□□□□□ -1.77
H3F3AP84243 RNU1-130P-201ENST00000363930 160 ntBASIC3.98□□□□□ -1.77
H3F3AP84243 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
H3F3AP84243 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
H3F3AP84243 ATP5F1P2-201ENST00000398143 760 ntBASIC3.98□□□□□ -1.77
H3F3AP84243 RPL23AP59-201ENST00000399415 461 ntBASIC3.98□□□□□ -1.77
H3F3AP84243 NCSTNP1-201ENST00000406229 144 ntBASIC3.98□□□□□ -1.77
H3F3AP84243 ELOCP19-201ENST00000411919 318 ntBASIC3.98□□□□□ -1.77
H3F3AP84243 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC3.98□□□□□ -1.77
H3F3AP84243 AL356387.2-201ENST00000422272 243 ntBASIC3.98□□□□□ -1.77
H3F3AP84243 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC3.98□□□□□ -1.77
H3F3AP84243 ARL6IP1P2-201ENST00000431356 563 ntBASIC3.98□□□□□ -1.77
H3F3AP84243 HMGB3P10-201ENST00000434734 572 ntBASIC3.98□□□□□ -1.77
H3F3AP84243 AC114495.1-201ENST00000441274 436 ntBASIC3.98□□□□□ -1.77
H3F3AP84243 CEACAMP9-201ENST00000442990 513 ntBASIC3.98□□□□□ -1.77
H3F3AP84243 RPL7P33-201ENST00000444159 742 ntBASIC3.98□□□□□ -1.77
H3F3AP84243 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC3.98□□□□□ -1.77
H3F3AP84243 EIF4A2P4-201ENST00000458691 1196 ntBASIC3.98□□□□□ -1.77
H3F3AP84243 AC010469.1-201ENST00000463864 576 ntBASIC3.98□□□□□ -1.77
H3F3AP84243 AC092905.1-201ENST00000467527 949 ntBASIC3.98□□□□□ -1.77
H3F3AP84243 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC3.98□□□□□ -1.77
H3F3AP84243 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC3.98□□□□□ -1.77
H3F3AP84243 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC3.98□□□□□ -1.77
H3F3AP84243 AC007066.2-202ENST00000566531 914 ntBASIC3.98□□□□□ -1.77
H3F3AP84243 MIR4330-201ENST00000579077 105 ntBASIC3.98□□□□□ -1.77
H3F3AP84243 SNORD39.2-201ENST00000579995 76 ntBASIC3.98□□□□□ -1.77
H3F3AP84243 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC3.98□□□□□ -1.77
H3F3AP84243 MIR4715-201ENST00000584117 79 ntBASIC3.98□□□□□ -1.77
H3F3AP84243 AC079587.1-201ENST00000603846 277 ntBASIC3.98□□□□□ -1.77
H3F3AP84243 AL353726.1-201ENST00000614041 1000 ntBASIC3.98□□□□□ -1.77
H3F3AP84243 AL023881.1-201ENST00000621088 301 ntBASIC3.98□□□□□ -1.77
H3F3AP84243 AC002044.3-201ENST00000623314 541 ntBASIC3.98□□□□□ -1.77
H3F3AP84243 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
H3F3AP84243 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC3.98□□□□□ -1.77
H3F3AP84243 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
H3F3AP84243 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
H3F3AP84243 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
H3F3AP84243 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC3.98□□□□□ -1.77
H3F3AP84243 MFSD4BP1-201ENST00000513330 1552 ntBASIC3.97□□□□□ -1.77
H3F3AP84243 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
H3F3AP84243 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
H3F3AP84243 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
H3F3AP84243 AL137100.1-201ENST00000556703 1620 ntBASIC3.97□□□□□ -1.77
H3F3AP84243 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC3.97□□□□□ -1.77
H3F3AP84243 AC104297.1-201ENST00000393779 870 ntBASIC3.97□□□□□ -1.77
H3F3AP84243 AC009302.1-201ENST00000417147 390 ntBASIC3.97□□□□□ -1.77
H3F3AP84243 AL139095.3-201ENST00000419672 1203 ntBASIC3.97□□□□□ -1.77
H3F3AP84243 CNOT7P1-201ENST00000429006 852 ntBASIC3.97□□□□□ -1.77
H3F3AP84243 SCP2-206ENST00000430330 938 ntTSL 2 BASIC3.97□□□□□ -1.77
H3F3AP84243 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC3.97□□□□□ -1.77
H3F3AP84243 AL357520.1-201ENST00000441557 453 ntBASIC3.97□□□□□ -1.77
H3F3AP84243 VN1R32P-201ENST00000452234 905 ntBASIC3.97□□□□□ -1.77
H3F3AP84243 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC3.97□□□□□ -1.77
H3F3AP84243 DDX39BP2-208ENST00000453923 258 ntBASIC3.97□□□□□ -1.77
H3F3AP84243 DHFRP3-201ENST00000455595 559 ntBASIC3.97□□□□□ -1.77
H3F3AP84243 NDUFA12P1-201ENST00000455914 406 ntBASIC3.97□□□□□ -1.77
H3F3AP84243 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC3.97□□□□□ -1.77
H3F3AP84243 RN7SL738P-201ENST00000470264 297 ntBASIC3.97□□□□□ -1.77
H3F3AP84243 AC090013.1-201ENST00000485147 480 ntBASIC3.97□□□□□ -1.77
H3F3AP84243 UBA52P3-201ENST00000491303 382 ntBASIC3.97□□□□□ -1.77
H3F3AP84243 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC3.97□□□□□ -1.77
H3F3AP84243 snoU109.6-201ENST00000516831 118 ntBASIC3.97□□□□□ -1.77
H3F3AP84243 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC3.97□□□□□ -1.77
H3F3AP84243 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC3.97□□□□□ -1.77
H3F3AP84243 OR8G5-201ENST00000524943 1041 ntBASIC3.97□□□□□ -1.77
H3F3AP84243 AC068831.4-201ENST00000556118 109 ntBASIC3.97□□□□□ -1.77
H3F3AP84243 HMGB3P26-201ENST00000560051 582 ntBASIC3.97□□□□□ -1.77
H3F3AP84243 RPL23AP97-201ENST00000568955 471 ntBASIC3.97□□□□□ -1.77
H3F3AP84243 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC3.97□□□□□ -1.77
H3F3AP84243 AC005191.1-201ENST00000603950 358 ntBASIC3.97□□□□□ -1.77
H3F3AP84243 AC020634.1-201ENST00000608701 549 ntBASIC3.97□□□□□ -1.77
H3F3AP84243 AC015813.4-201ENST00000610469 179 ntBASIC3.97□□□□□ -1.77
H3F3AP84243 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
H3F3AP84243 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
H3F3AP84243 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC3.97□□□□□ -1.77
H3F3AP84243 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC3.97□□□□□ -1.77
H3F3AP84243 TANK-205ENST00000405852 2155 ntTSL 5 BASIC3.97□□□□□ -1.77
H3F3AP84243 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
H3F3AP84243 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC3.97□□□□□ -1.77
H3F3AP84243 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
H3F3AP84243 ST7-212ENST00000422922 1887 ntTSL 5 BASIC3.96□□□□□ -1.77
H3F3AP84243 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.77
H3F3AP84243 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms