Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC2.97□□□□□ -1.93
PRKDCP78527 Z95327.3-201ENST00000610385 572 ntBASIC2.97□□□□□ -1.93
PRKDCP78527 CTNND1-201ENST00000358694 6135 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
PRKDCP78527 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
PRKDCP78527 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
PRKDCP78527 AP000473.2-201ENST00000602659 1537 ntBASIC2.97□□□□□ -1.93
PRKDCP78527 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.97□□□□□ -1.93
PRKDCP78527 SRPX2-201ENST00000373004 6679 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
PRKDCP78527 EOGT-210ENST00000615922 1931 ntBASIC2.97□□□□□ -1.93
PRKDCP78527 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC2.97□□□□□ -1.93
PRKDCP78527 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC2.97□□□□□ -1.93
PRKDCP78527 SOD2P1-201ENST00000396543 562 ntBASIC2.97□□□□□ -1.93
PRKDCP78527 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC2.97□□□□□ -1.93
PRKDCP78527 RPL35AP15-201ENST00000468042 339 ntBASIC2.97□□□□□ -1.93
PRKDCP78527 AC004924.1-201ENST00000480160 781 ntBASIC2.97□□□□□ -1.93
PRKDCP78527 PTS-202ENST00000524931 696 ntTSL 3 BASIC2.97□□□□□ -1.93
PRKDCP78527 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC2.97□□□□□ -1.93
PRKDCP78527 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC2.97□□□□□ -1.93
PRKDCP78527 AC138932.5-201ENST00000617759 563 ntBASIC2.97□□□□□ -1.93
PRKDCP78527 TBCK-201ENST00000273980 8101 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
PRKDCP78527 RTTN-222ENST00000640769 8088 ntAPPRIS P1 TSL 2 BASIC2.97□□□□□ -1.93
PRKDCP78527 KAT6B-202ENST00000372711 7560 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
PRKDCP78527 AC119744.1-201ENST00000454746 1715 ntBASIC2.97□□□□□ -1.93
PRKDCP78527 OR5A2-201ENST00000302040 6318 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
PRKDCP78527 AP1M1-201ENST00000291439 13193 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
PRKDCP78527 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC2.97□□□□□ -1.93
PRKDCP78527 AC012158.1-204ENST00000483430 465 ntBASIC2.97□□□□□ -1.93
PRKDCP78527 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC2.97□□□□□ -1.93
PRKDCP78527 RN7SKP141-201ENST00000516167 338 ntBASIC2.97□□□□□ -1.93
PRKDCP78527 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC2.97□□□□□ -1.93
PRKDCP78527 AC007546.2-201ENST00000623996 360 ntBASIC2.97□□□□□ -1.93
PRKDCP78527 ST8SIA5-203ENST00000538168 13761 ntTSL 2 BASIC2.97□□□□□ -1.93
PRKDCP78527 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
PRKDCP78527 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC2.97□□□□□ -1.93
PRKDCP78527 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC2.97□□□□□ -1.93
PRKDCP78527 KIAA1210-201ENST00000402510 7824 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.93
PRKDCP78527 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC2.96□□□□□ -1.93
PRKDCP78527 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.93
PRKDCP78527 UBE2V1P2-201ENST00000397758 440 ntBASIC2.96□□□□□ -1.93
PRKDCP78527 AL035423.1-201ENST00000420331 213 ntBASIC2.96□□□□□ -1.93
PRKDCP78527 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC2.96□□□□□ -1.93
PRKDCP78527 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC2.96□□□□□ -1.93
PRKDCP78527 RN7SL197P-201ENST00000466981 299 ntBASIC2.96□□□□□ -1.93
PRKDCP78527 AC079684.1-201ENST00000621405 437 ntBASIC2.96□□□□□ -1.93
PRKDCP78527 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC2.96□□□□□ -1.93
PRKDCP78527 AC140134.1-201ENST00000511830 3544 ntBASIC2.96□□□□□ -1.93
PRKDCP78527 AC073136.1-201ENST00000449426 2884 ntBASIC2.96□□□□□ -1.94
PRKDCP78527 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
PRKDCP78527 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC2.96□□□□□ -1.94
PRKDCP78527 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC2.96□□□□□ -1.94
PRKDCP78527 AL049781.1-201ENST00000623195 3585 ntBASIC2.96□□□□□ -1.94
PRKDCP78527 GRIN2A-202ENST00000396573 14450 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
PRKDCP78527 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
PRKDCP78527 RNA5SP374-201ENST00000362939 125 ntBASIC2.96□□□□□ -1.94
PRKDCP78527 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC2.96□□□□□ -1.94
PRKDCP78527 AC068790.5-201ENST00000602741 355 ntBASIC2.96□□□□□ -1.94
PRKDCP78527 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.96□□□□□ -1.94
PRKDCP78527 MESTIT1_2.1-201ENST00000616328 235 ntBASIC2.96□□□□□ -1.94
PRKDCP78527 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC2.96□□□□□ -1.94
PRKDCP78527 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC2.96□□□□□ -1.94
PRKDCP78527 LMO7-202ENST00000341547 7237 ntAPPRIS P3 TSL 1 (best) BASIC2.96□□□□□ -1.94
PRKDCP78527 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
PRKDCP78527 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC2.96□□□□□ -1.94
PRKDCP78527 ALB-202ENST00000401494 1659 ntTSL 5 BASIC2.96□□□□□ -1.94
PRKDCP78527 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
PRKDCP78527 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC2.96□□□□□ -1.94
PRKDCP78527 BDP1P-201ENST00000582658 1990 ntBASIC2.96□□□□□ -1.94
PRKDCP78527 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
PRKDCP78527 SLC35E3-202ENST00000398004 17791 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
PRKDCP78527 PMCHL2-202ENST00000450213 1917 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
PRKDCP78527 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
PRKDCP78527 USF3-201ENST00000316407 13708 ntAPPRIS P2 TSL 5 BASIC2.96□□□□□ -1.94
PRKDCP78527 AL590609.2-201ENST00000421430 368 ntBASIC2.96□□□□□ -1.94
PRKDCP78527 AC092162.1-201ENST00000432828 434 ntBASIC2.96□□□□□ -1.94
PRKDCP78527 Z74696.2-201ENST00000436514 498 ntBASIC2.96□□□□□ -1.94
PRKDCP78527 AC127537.2-201ENST00000439258 465 ntBASIC2.96□□□□□ -1.94
PRKDCP78527 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC2.96□□□□□ -1.94
PRKDCP78527 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC2.96□□□□□ -1.94
PRKDCP78527 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC2.96□□□□□ -1.94
PRKDCP78527 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
PRKDCP78527 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
PRKDCP78527 MYOF-202ENST00000359263 6719 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
PRKDCP78527 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC2.96□□□□□ -1.94
PRKDCP78527 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
PRKDCP78527 AL133383.2-201ENST00000622958 2336 ntBASIC2.96□□□□□ -1.94
PRKDCP78527 CTNND1-231ENST00000532463 5749 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
PRKDCP78527 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
PRKDCP78527 OSBPL9P1-201ENST00000604744 1469 ntBASIC2.96□□□□□ -1.94
PRKDCP78527 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC2.95□□□□□ -1.94
PRKDCP78527 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
PRKDCP78527 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC2.95□□□□□ -1.94
PRKDCP78527 ESD-201ENST00000378697 1079 ntTSL 5 BASIC2.95□□□□□ -1.94
PRKDCP78527 TCEA1P2-201ENST00000420496 906 ntBASIC2.95□□□□□ -1.94
PRKDCP78527 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC2.95□□□□□ -1.94
PRKDCP78527 AC012671.1-201ENST00000451912 203 ntBASIC2.95□□□□□ -1.94
PRKDCP78527 AC092691.2-201ENST00000461787 803 ntBASIC2.95□□□□□ -1.94
PRKDCP78527 AC096576.1-201ENST00000489014 359 ntBASIC2.95□□□□□ -1.94
PRKDCP78527 AC006077.1-201ENST00000604746 343 ntBASIC2.95□□□□□ -1.94
PRKDCP78527 AL713922.2-201ENST00000619384 716 ntBASIC2.95□□□□□ -1.94
PRKDCP78527 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC2.95□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms