Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC3.26□□□□□ -1.89
CKS1BP61024 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC3.26□□□□□ -1.89
CKS1BP61024 AC135626.1-201ENST00000556983 435 ntBASIC3.26□□□□□ -1.89
CKS1BP61024 AC079075.1-201ENST00000559543 878 ntBASIC3.26□□□□□ -1.89
CKS1BP61024 NDUFA5P11-201ENST00000567995 343 ntBASIC3.26□□□□□ -1.89
CKS1BP61024 AC069366.1-201ENST00000583159 838 ntBASIC3.26□□□□□ -1.89
CKS1BP61024 AC020910.2-201ENST00000603635 610 ntBASIC3.26□□□□□ -1.89
CKS1BP61024 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC3.26□□□□□ -1.89
CKS1BP61024 AC090527.3-201ENST00000619041 548 ntBASIC3.26□□□□□ -1.89
CKS1BP61024 U7.8-201ENST00000619968 63 ntBASIC3.26□□□□□ -1.89
CKS1BP61024 AL359742.1-201ENST00000622497 540 ntBASIC3.26□□□□□ -1.89
CKS1BP61024 AC099494.2-201ENST00000623371 978 ntBASIC3.26□□□□□ -1.89
CKS1BP61024 AC011815.3-201ENST00000624194 473 ntBASIC3.26□□□□□ -1.89
CKS1BP61024 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.26□□□□□ -1.89
CKS1BP61024 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CKS1BP61024 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CKS1BP61024 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CKS1BP61024 MAPK10-253ENST00000641010 4072 ntBASIC3.25□□□□□ -1.89
CKS1BP61024 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CKS1BP61024 SEPT7P7-201ENST00000420492 1301 ntBASIC3.25□□□□□ -1.89
CKS1BP61024 RPS4XP5-202ENST00000449995 1334 ntBASIC3.25□□□□□ -1.89
CKS1BP61024 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
CKS1BP61024 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
CKS1BP61024 AC008549.2-201ENST00000333482 706 ntBASIC3.25□□□□□ -1.89
CKS1BP61024 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
CKS1BP61024 RN7SKP115-201ENST00000363177 317 ntBASIC3.25□□□□□ -1.89
CKS1BP61024 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC3.25□□□□□ -1.89
CKS1BP61024 AC136624.1-201ENST00000400791 413 ntBASIC3.25□□□□□ -1.89
CKS1BP61024 RPL31P52-201ENST00000407532 367 ntBASIC3.25□□□□□ -1.89
CKS1BP61024 U3.35-201ENST00000408405 208 ntBASIC3.25□□□□□ -1.89
CKS1BP61024 AC099535.1-201ENST00000408928 371 ntBASIC3.25□□□□□ -1.89
CKS1BP61024 RN7SKP59-201ENST00000410520 314 ntBASIC3.25□□□□□ -1.89
CKS1BP61024 AC092647.1-201ENST00000420654 287 ntBASIC3.25□□□□□ -1.89
CKS1BP61024 RPL23AP4-201ENST00000427757 463 ntBASIC3.25□□□□□ -1.89
CKS1BP61024 BX323845.1-201ENST00000432417 179 ntBASIC3.25□□□□□ -1.89
CKS1BP61024 SPRYD7P1-201ENST00000443861 570 ntBASIC3.25□□□□□ -1.89
CKS1BP61024 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CKS1BP61024 TCEA1P1-201ENST00000449716 880 ntBASIC3.25□□□□□ -1.89
CKS1BP61024 IGHV5-78-201ENST00000450948 295 ntBASIC3.25□□□□□ -1.89
CKS1BP61024 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC3.25□□□□□ -1.89
CKS1BP61024 SNORD108-201ENST00000459332 71 ntBASIC3.25□□□□□ -1.89
CKS1BP61024 SNRPGP3-201ENST00000469405 227 ntBASIC3.25□□□□□ -1.89
CKS1BP61024 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.25□□□□□ -1.89
CKS1BP61024 AC116562.1-201ENST00000485355 781 ntBASIC3.25□□□□□ -1.89
CKS1BP61024 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC3.25□□□□□ -1.89
CKS1BP61024 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CKS1BP61024 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.25□□□□□ -1.89
CKS1BP61024 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC3.25□□□□□ -1.89
CKS1BP61024 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.25□□□□□ -1.89
CKS1BP61024 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC3.25□□□□□ -1.89
CKS1BP61024 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC3.25□□□□□ -1.89
CKS1BP61024 MIR5010-201ENST00000582846 120 ntBASIC3.25□□□□□ -1.89
CKS1BP61024 AP000919.1-201ENST00000582850 985 ntBASIC3.25□□□□□ -1.89
CKS1BP61024 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC3.25□□□□□ -1.89
CKS1BP61024 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC3.25□□□□□ -1.89
CKS1BP61024 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC3.25□□□□□ -1.89
CKS1BP61024 AL589674.2-201ENST00000604304 337 ntBASIC3.25□□□□□ -1.89
CKS1BP61024 Z82195.1-201ENST00000604558 398 ntBASIC3.25□□□□□ -1.89
CKS1BP61024 IGKV2OR2-2-201ENST00000605025 300 ntBASIC3.25□□□□□ -1.89
CKS1BP61024 AC005377.1-201ENST00000605126 456 ntBASIC3.25□□□□□ -1.89
CKS1BP61024 COX6CP4-201ENST00000605798 228 ntBASIC3.25□□□□□ -1.89
CKS1BP61024 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC3.25□□□□□ -1.89
CKS1BP61024 AC126175.1-201ENST00000617041 758 ntBASIC3.25□□□□□ -1.89
CKS1BP61024 AC010809.3-201ENST00000621310 641 ntBASIC3.25□□□□□ -1.89
CKS1BP61024 AL353662.3-201ENST00000625131 237 ntBASIC3.25□□□□□ -1.89
CKS1BP61024 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC3.25□□□□□ -1.89
CKS1BP61024 U6.98-201ENST00000637157 84 ntBASIC3.25□□□□□ -1.89
CKS1BP61024 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC3.25□□□□□ -1.89
CKS1BP61024 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CKS1BP61024 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CKS1BP61024 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
CKS1BP61024 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CKS1BP61024 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
CKS1BP61024 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CKS1BP61024 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CKS1BP61024 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC3.24□□□□□ -1.89
CKS1BP61024 AC109780.1-201ENST00000451768 1344 ntBASIC3.24□□□□□ -1.89
CKS1BP61024 DHX9P1-201ENST00000436565 3076 ntBASIC3.24□□□□□ -1.89
CKS1BP61024 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
CKS1BP61024 AL133383.2-201ENST00000622958 2336 ntBASIC3.24□□□□□ -1.89
CKS1BP61024 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CKS1BP61024 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CKS1BP61024 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
CKS1BP61024 RNU1-43P-201ENST00000365052 165 ntBASIC3.24□□□□□ -1.89
CKS1BP61024 MIR124-3-201ENST00000384866 87 ntBASIC3.24□□□□□ -1.89
CKS1BP61024 DPPA2P3-201ENST00000411853 655 ntBASIC3.24□□□□□ -1.89
CKS1BP61024 TRIM60P17-201ENST00000415181 719 ntBASIC3.24□□□□□ -1.89
CKS1BP61024 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC3.24□□□□□ -1.89
CKS1BP61024 FAR2P4-202ENST00000425399 584 ntBASIC3.24□□□□□ -1.89
CKS1BP61024 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC3.24□□□□□ -1.89
CKS1BP61024 MTCO3P21-201ENST00000430791 643 ntBASIC3.24□□□□□ -1.89
CKS1BP61024 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC3.24□□□□□ -1.89
CKS1BP61024 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.24□□□□□ -1.89
CKS1BP61024 AL138899.2-201ENST00000439139 499 ntBASIC3.24□□□□□ -1.89
CKS1BP61024 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC3.24□□□□□ -1.89
CKS1BP61024 SCAND3P1-201ENST00000439854 1060 ntBASIC3.24□□□□□ -1.89
CKS1BP61024 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.24□□□□□ -1.89
CKS1BP61024 RN7SL330P-201ENST00000469709 307 ntBASIC3.24□□□□□ -1.89
CKS1BP61024 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC3.24□□□□□ -1.89
CKS1BP61024 RN7SL222P-201ENST00000476452 299 ntBASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms