Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 IGKV2-19-201ENST00000518132 283 ntBASIC5.12□□□□□ -1.59
SUMO3P55854 AC136777.2-201ENST00000522979 358 ntBASIC5.12□□□□□ -1.59
SUMO3P55854 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.12□□□□□ -1.59
SUMO3P55854 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC5.12□□□□□ -1.59
SUMO3P55854 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC5.12□□□□□ -1.59
SUMO3P55854 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SUMO3P55854 UBE2NP1-201ENST00000545592 458 ntBASIC5.12□□□□□ -1.59
SUMO3P55854 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC5.12□□□□□ -1.59
SUMO3P55854 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC5.12□□□□□ -1.59
SUMO3P55854 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.12□□□□□ -1.59
SUMO3P55854 AC022069.1-201ENST00000582910 658 ntBASIC5.12□□□□□ -1.59
SUMO3P55854 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC5.12□□□□□ -1.59
SUMO3P55854 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC5.12□□□□□ -1.59
SUMO3P55854 AC008687.2-201ENST00000597865 520 ntBASIC5.12□□□□□ -1.59
SUMO3P55854 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC5.12□□□□□ -1.59
SUMO3P55854 AC064807.4-201ENST00000607201 407 ntBASIC5.12□□□□□ -1.59
SUMO3P55854 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC5.12□□□□□ -1.59
SUMO3P55854 AC097505.1-201ENST00000610199 565 ntBASIC5.12□□□□□ -1.59
SUMO3P55854 AL031658.2-201ENST00000616850 651 ntBASIC5.12□□□□□ -1.59
SUMO3P55854 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
SUMO3P55854 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SUMO3P55854 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC5.12□□□□□ -1.59
SUMO3P55854 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC5.12□□□□□ -1.59
SUMO3P55854 AC026634.1-201ENST00000634369 198 ntBASIC5.12□□□□□ -1.59
SUMO3P55854 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC5.12□□□□□ -1.59
SUMO3P55854 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.12□□□□□ -1.59
SUMO3P55854 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC5.12□□□□□ -1.59
SUMO3P55854 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SUMO3P55854 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SUMO3P55854 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
SUMO3P55854 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SUMO3P55854 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.12□□□□□ -1.59
SUMO3P55854 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SUMO3P55854 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
SUMO3P55854 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.12□□□□□ -1.59
SUMO3P55854 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
SUMO3P55854 AC083899.1-201ENST00000454465 3819 ntBASIC5.11□□□□□ -1.59
SUMO3P55854 AC025125.1-201ENST00000624743 1922 ntBASIC5.11□□□□□ -1.59
SUMO3P55854 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SUMO3P55854 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SUMO3P55854 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.11□□□□□ -1.59
SUMO3P55854 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SUMO3P55854 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC5.11□□□□□ -1.59
SUMO3P55854 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.11□□□□□ -1.59
SUMO3P55854 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
SUMO3P55854 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SUMO3P55854 GAPDHP24-201ENST00000328713 983 ntBASIC5.11□□□□□ -1.59
SUMO3P55854 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC5.11□□□□□ -1.59
SUMO3P55854 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SUMO3P55854 AL009179.1-201ENST00000406085 265 ntBASIC5.11□□□□□ -1.59
SUMO3P55854 AC096921.1-201ENST00000411661 375 ntBASIC5.11□□□□□ -1.59
SUMO3P55854 AP000534.2-201ENST00000412729 568 ntBASIC5.11□□□□□ -1.59
SUMO3P55854 PRELID3BP11-201ENST00000414230 479 ntBASIC5.11□□□□□ -1.59
SUMO3P55854 FCF1P2-201ENST00000415284 583 ntBASIC5.11□□□□□ -1.59
SUMO3P55854 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.11□□□□□ -1.59
SUMO3P55854 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC5.11□□□□□ -1.59
SUMO3P55854 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC5.11□□□□□ -1.59
SUMO3P55854 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC5.11□□□□□ -1.59
SUMO3P55854 RIMKLBP2-201ENST00000424737 654 ntBASIC5.11□□□□□ -1.59
SUMO3P55854 MTND6P12-201ENST00000428247 522 ntBASIC5.11□□□□□ -1.59
SUMO3P55854 UBE2V1P1-201ENST00000430836 445 ntBASIC5.11□□□□□ -1.59
SUMO3P55854 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC5.11□□□□□ -1.59
SUMO3P55854 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC5.11□□□□□ -1.59
SUMO3P55854 LINC02210-201ENST00000444561 288 ntBASIC5.11□□□□□ -1.59
SUMO3P55854 RPL12P26-201ENST00000452430 487 ntBASIC5.11□□□□□ -1.59
SUMO3P55854 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC5.11□□□□□ -1.59
SUMO3P55854 RNU7-125P-201ENST00000458760 62 ntBASIC5.11□□□□□ -1.59
SUMO3P55854 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC5.11□□□□□ -1.59
SUMO3P55854 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC5.11□□□□□ -1.59
SUMO3P55854 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.11□□□□□ -1.59
SUMO3P55854 AC025674.1-201ENST00000507074 324 ntBASIC5.11□□□□□ -1.59
SUMO3P55854 AC109464.1-201ENST00000511091 819 ntBASIC5.11□□□□□ -1.59
SUMO3P55854 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.11□□□□□ -1.59
SUMO3P55854 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC5.11□□□□□ -1.59
SUMO3P55854 HNRNPKP5-201ENST00000515300 253 ntBASIC5.11□□□□□ -1.59
SUMO3P55854 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC5.11□□□□□ -1.59
SUMO3P55854 MINCR-206ENST00000524335 499 ntTSL 2 BASIC5.11□□□□□ -1.59
SUMO3P55854 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC5.11□□□□□ -1.59
SUMO3P55854 AC122688.1-201ENST00000541494 223 ntBASIC5.11□□□□□ -1.59
SUMO3P55854 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC5.11□□□□□ -1.59
SUMO3P55854 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC5.11□□□□□ -1.59
SUMO3P55854 AL049872.1-201ENST00000556323 322 ntBASIC5.11□□□□□ -1.59
SUMO3P55854 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC5.11□□□□□ -1.59
SUMO3P55854 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC5.11□□□□□ -1.59
SUMO3P55854 ISCA1P3-201ENST00000577104 373 ntBASIC5.11□□□□□ -1.59
SUMO3P55854 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC5.11□□□□□ -1.59
SUMO3P55854 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC5.11□□□□□ -1.59
SUMO3P55854 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC5.11□□□□□ -1.59
SUMO3P55854 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC5.11□□□□□ -1.59
SUMO3P55854 AC090616.2-202ENST00000584248 222 ntBASIC5.11□□□□□ -1.59
SUMO3P55854 MRO-208ENST00000588444 866 ntTSL 3 BASIC5.11□□□□□ -1.59
SUMO3P55854 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC5.11□□□□□ -1.59
SUMO3P55854 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SUMO3P55854 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC5.11□□□□□ -1.59
SUMO3P55854 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.11□□□□□ -1.59
SUMO3P55854 AC107982.1-201ENST00000507171 1300 ntBASIC5.11□□□□□ -1.59
SUMO3P55854 AP000526.1-201ENST00000603308 1388 ntBASIC5.11□□□□□ -1.59
SUMO3P55854 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC5.11□□□□□ -1.59
SUMO3P55854 AC053481.2-202ENST00000582394 1500 ntBASIC5.11□□□□□ -1.59
SUMO3P55854 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms