Protein–RNA interactions for Protein: P55318

FOXA3, Hepatocyte nuclear factor 3-gamma, humanhuman

Predicted RBP Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3P55318 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.27□□□□□ -1.89
FOXA3P55318 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC3.27□□□□□ -1.89
FOXA3P55318 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
FOXA3P55318 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.26□□□□□ -1.89
FOXA3P55318 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
FOXA3P55318 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
FOXA3P55318 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC3.26□□□□□ -1.89
FOXA3P55318 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
FOXA3P55318 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC3.26□□□□□ -1.89
FOXA3P55318 RPL23P2-201ENST00000320371 421 ntBASIC3.26□□□□□ -1.89
FOXA3P55318 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
FOXA3P55318 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
FOXA3P55318 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC3.26□□□□□ -1.89
FOXA3P55318 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC3.26□□□□□ -1.89
FOXA3P55318 MAST4-207ENST00000407621 559 ntTSL 2 BASIC3.26□□□□□ -1.89
FOXA3P55318 OR3A2-201ENST00000408891 1076 ntBASIC3.26□□□□□ -1.89
FOXA3P55318 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
FOXA3P55318 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC3.26□□□□□ -1.89
FOXA3P55318 AMMECR1LP1-201ENST00000415152 841 ntBASIC3.26□□□□□ -1.89
FOXA3P55318 AC019050.1-201ENST00000418508 492 ntBASIC3.26□□□□□ -1.89
FOXA3P55318 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC3.26□□□□□ -1.89
FOXA3P55318 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC3.26□□□□□ -1.89
FOXA3P55318 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC3.26□□□□□ -1.89
FOXA3P55318 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC3.26□□□□□ -1.89
FOXA3P55318 SUMO2P1-206ENST00000445436 284 ntBASIC3.26□□□□□ -1.89
FOXA3P55318 EEF1A1P1-201ENST00000447052 739 ntBASIC3.26□□□□□ -1.89
FOXA3P55318 MTND2P25-201ENST00000449028 610 ntBASIC3.26□□□□□ -1.89
FOXA3P55318 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC3.26□□□□□ -1.89
FOXA3P55318 AURKAPS1-201ENST00000451805 1212 ntBASIC3.26□□□□□ -1.89
FOXA3P55318 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC3.26□□□□□ -1.89
FOXA3P55318 RN7SL205P-201ENST00000490174 284 ntBASIC3.26□□□□□ -1.89
FOXA3P55318 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC3.26□□□□□ -1.89
FOXA3P55318 AC007016.1-201ENST00000512110 244 ntBASIC3.26□□□□□ -1.89
FOXA3P55318 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC3.26□□□□□ -1.89
FOXA3P55318 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC3.26□□□□□ -1.89
FOXA3P55318 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC3.26□□□□□ -1.89
FOXA3P55318 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC3.26□□□□□ -1.89
FOXA3P55318 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.26□□□□□ -1.89
FOXA3P55318 AC020914.4-201ENST00000597690 277 ntBASIC3.26□□□□□ -1.89
FOXA3P55318 AC087763.1-201ENST00000603391 286 ntBASIC3.26□□□□□ -1.89
FOXA3P55318 AL512329.2-201ENST00000607350 548 ntBASIC3.26□□□□□ -1.89
FOXA3P55318 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
FOXA3P55318 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.26□□□□□ -1.89
FOXA3P55318 MIR6778-201ENST00000617912 73 ntBASIC3.26□□□□□ -1.89
FOXA3P55318 MIR7702-201ENST00000621931 59 ntBASIC3.26□□□□□ -1.89
FOXA3P55318 U3.53-201ENST00000628922 216 ntBASIC3.26□□□□□ -1.89
FOXA3P55318 MIR1910-201ENST00000636955 80 ntBASIC3.26□□□□□ -1.89
FOXA3P55318 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
FOXA3P55318 AC114546.3-201ENST00000623582 1734 ntBASIC3.26□□□□□ -1.89
FOXA3P55318 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
FOXA3P55318 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC3.26□□□□□ -1.89
FOXA3P55318 AC095050.2-201ENST00000510748 1458 ntBASIC3.26□□□□□ -1.89
FOXA3P55318 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
FOXA3P55318 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
FOXA3P55318 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC3.26□□□□□ -1.89
FOXA3P55318 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
FOXA3P55318 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
FOXA3P55318 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
FOXA3P55318 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.26□□□□□ -1.89
FOXA3P55318 Z82217.1-201ENST00000625157 8149 ntBASIC3.25□□□□□ -1.89
FOXA3P55318 AL031985.3-201ENST00000565390 2449 ntBASIC3.25□□□□□ -1.89
FOXA3P55318 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
FOXA3P55318 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC3.25□□□□□ -1.89
FOXA3P55318 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.25□□□□□ -1.89
FOXA3P55318 AC027287.1-201ENST00000553115 1453 ntBASIC3.25□□□□□ -1.89
FOXA3P55318 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
FOXA3P55318 RN7SKP162-201ENST00000363605 345 ntBASIC3.25□□□□□ -1.89
FOXA3P55318 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3.25□□□□□ -1.89
FOXA3P55318 SNORA3C-201ENST00000408792 125 ntBASIC3.25□□□□□ -1.89
FOXA3P55318 RN7SKP56-201ENST00000410513 331 ntBASIC3.25□□□□□ -1.89
FOXA3P55318 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC3.25□□□□□ -1.89
FOXA3P55318 ARAFP1-201ENST00000422172 605 ntBASIC3.25□□□□□ -1.89
FOXA3P55318 RPL7P4-203ENST00000430239 730 ntBASIC3.25□□□□□ -1.89
FOXA3P55318 RPS29P14-201ENST00000431518 171 ntBASIC3.25□□□□□ -1.89
FOXA3P55318 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC3.25□□□□□ -1.89
FOXA3P55318 AL356535.1-201ENST00000440335 398 ntBASIC3.25□□□□□ -1.89
FOXA3P55318 TPTE2P3-201ENST00000441562 1189 ntBASIC3.25□□□□□ -1.89
FOXA3P55318 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.25□□□□□ -1.89
FOXA3P55318 AC112498.1-201ENST00000444401 332 ntBASIC3.25□□□□□ -1.89
FOXA3P55318 CASP3P1-201ENST00000446037 609 ntBASIC3.25□□□□□ -1.89
FOXA3P55318 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.25□□□□□ -1.89
FOXA3P55318 RPL37AP8-201ENST00000494116 276 ntBASIC3.25□□□□□ -1.89
FOXA3P55318 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
FOXA3P55318 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC3.25□□□□□ -1.89
FOXA3P55318 AC109458.1-201ENST00000508858 316 ntBASIC3.25□□□□□ -1.89
FOXA3P55318 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC3.25□□□□□ -1.89
FOXA3P55318 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC3.25□□□□□ -1.89
FOXA3P55318 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
FOXA3P55318 IGHVII-60-1-201ENST00000519079 256 ntBASIC3.25□□□□□ -1.89
FOXA3P55318 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC3.25□□□□□ -1.89
FOXA3P55318 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.25□□□□□ -1.89
FOXA3P55318 AP006289.1-201ENST00000538089 277 ntBASIC3.25□□□□□ -1.89
FOXA3P55318 AC084757.1-201ENST00000559987 490 ntBASIC3.25□□□□□ -1.89
FOXA3P55318 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC3.25□□□□□ -1.89
FOXA3P55318 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC3.25□□□□□ -1.89
FOXA3P55318 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC3.25□□□□□ -1.89
FOXA3P55318 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC3.25□□□□□ -1.89
FOXA3P55318 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC3.25□□□□□ -1.89
FOXA3P55318 uc_338.32-201ENST00000615087 172 ntBASIC3.25□□□□□ -1.89
FOXA3P55318 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms