Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC5.07□□□□□ -1.6
VCPP55072 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC5.07□□□□□ -1.6
VCPP55072 AC109635.6-201ENST00000525487 1113 ntBASIC5.07□□□□□ -1.6
VCPP55072 AC068831.4-201ENST00000556118 109 ntBASIC5.07□□□□□ -1.6
VCPP55072 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC5.07□□□□□ -1.6
VCPP55072 AC053481.3-201ENST00000577881 843 ntBASIC5.07□□□□□ -1.6
VCPP55072 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC5.07□□□□□ -1.6
VCPP55072 IGKV1OR2-9-201ENST00000603957 287 ntBASIC5.07□□□□□ -1.6
VCPP55072 IGKV1OR2-11-201ENST00000604120 287 ntBASIC5.07□□□□□ -1.6
VCPP55072 GMCL1P2-201ENST00000605230 823 ntBASIC5.07□□□□□ -1.6
VCPP55072 AC079791.1-201ENST00000605356 973 ntBASIC5.07□□□□□ -1.6
VCPP55072 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.07□□□□□ -1.6
VCPP55072 AL121890.3-201ENST00000618494 516 ntBASIC5.07□□□□□ -1.6
VCPP55072 CARF-208ENST00000428585 2513 ntTSL 2 BASIC5.07□□□□□ -1.6
VCPP55072 AC017104.4-201ENST00000636283 1592 ntBASIC5.07□□□□□ -1.6
VCPP55072 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
VCPP55072 SALL4P2-201ENST00000423288 2910 ntBASIC5.07□□□□□ -1.6
VCPP55072 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
VCPP55072 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
VCPP55072 AC107068.1-201ENST00000563286 4218 ntBASIC5.06□□□□□ -1.6
VCPP55072 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
VCPP55072 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
VCPP55072 AC009951.1-201ENST00000623674 2614 ntBASIC5.06□□□□□ -1.6
VCPP55072 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
VCPP55072 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
VCPP55072 SNORD113.2-201ENST00000364166 89 ntBASIC5.06□□□□□ -1.6
VCPP55072 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
VCPP55072 ZNF736P10Y-201ENST00000403990 1110 ntBASIC5.06□□□□□ -1.6
VCPP55072 U3.35-201ENST00000408405 208 ntBASIC5.06□□□□□ -1.6
VCPP55072 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC5.06□□□□□ -1.6
VCPP55072 EIF4A1P1-201ENST00000420241 934 ntBASIC5.06□□□□□ -1.6
VCPP55072 AC022022.1-201ENST00000430304 178 ntBASIC5.06□□□□□ -1.6
VCPP55072 NMNAT1P2-201ENST00000435192 860 ntBASIC5.06□□□□□ -1.6
VCPP55072 MRPL48P1-201ENST00000445390 636 ntBASIC5.06□□□□□ -1.6
VCPP55072 AC000111.2-201ENST00000448200 210 ntBASIC5.06□□□□□ -1.6
VCPP55072 CYCSP34-201ENST00000458172 304 ntBASIC5.06□□□□□ -1.6
VCPP55072 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC5.06□□□□□ -1.6
VCPP55072 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC5.06□□□□□ -1.6
VCPP55072 EIF1AXP2-201ENST00000555940 413 ntBASIC5.06□□□□□ -1.6
VCPP55072 AC011270.1-201ENST00000558606 583 ntBASIC5.06□□□□□ -1.6
VCPP55072 IGKV2OR2-2-201ENST00000605025 300 ntBASIC5.06□□□□□ -1.6
VCPP55072 AL008729.2-201ENST00000606393 473 ntBASIC5.06□□□□□ -1.6
VCPP55072 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5.06□□□□□ -1.6
VCPP55072 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
VCPP55072 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC5.06□□□□□ -1.6
VCPP55072 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC5.06□□□□□ -1.6
VCPP55072 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
VCPP55072 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC5.06□□□□□ -1.6
VCPP55072 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
VCPP55072 AC000123.3-201ENST00000624029 4975 ntBASIC5.05□□□□□ -1.6
VCPP55072 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
VCPP55072 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
VCPP55072 AC005332.5-201ENST00000591222 2919 ntBASIC5.05□□□□□ -1.6
VCPP55072 AL592148.3-201ENST00000608771 2646 ntBASIC5.05□□□□□ -1.6
VCPP55072 AC008758.3-201ENST00000507003 1829 ntBASIC5.05□□□□□ -1.6
VCPP55072 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
VCPP55072 MIR670-201ENST00000390142 98 ntBASIC5.05□□□□□ -1.6
VCPP55072 OR6C69P-201ENST00000394268 893 ntBASIC5.05□□□□□ -1.6
VCPP55072 AL592291.1-201ENST00000403830 352 ntBASIC5.05□□□□□ -1.6
VCPP55072 SNORA11.2-201ENST00000408318 127 ntBASIC5.05□□□□□ -1.6
VCPP55072 AL590609.2-201ENST00000421430 368 ntBASIC5.05□□□□□ -1.6
VCPP55072 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC5.05□□□□□ -1.6
VCPP55072 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC5.05□□□□□ -1.6
VCPP55072 SLC25A18P1-201ENST00000449385 454 ntBASIC5.05□□□□□ -1.6
VCPP55072 OR6C72P-201ENST00000451403 892 ntBASIC5.05□□□□□ -1.6
VCPP55072 AC112206.1-201ENST00000468416 477 ntBASIC5.05□□□□□ -1.6
VCPP55072 NDUFB4P12-201ENST00000513465 390 ntBASIC5.05□□□□□ -1.6
VCPP55072 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC5.05□□□□□ -1.6
VCPP55072 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC5.05□□□□□ -1.6
VCPP55072 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC5.05□□□□□ -1.6
VCPP55072 AC005191.1-201ENST00000603950 358 ntBASIC5.05□□□□□ -1.6
VCPP55072 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
VCPP55072 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC5.05□□□□□ -1.6
VCPP55072 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
VCPP55072 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC5.05□□□□□ -1.6
VCPP55072 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC5.05□□□□□ -1.6
VCPP55072 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
VCPP55072 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
VCPP55072 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
VCPP55072 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
VCPP55072 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
VCPP55072 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC5.04□□□□□ -1.6
VCPP55072 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
VCPP55072 DDX18P3-201ENST00000404856 2007 ntBASIC5.04□□□□□ -1.6
VCPP55072 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
VCPP55072 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
VCPP55072 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
VCPP55072 RNA5SP509-201ENST00000364577 119 ntBASIC5.04□□□□□ -1.6
VCPP55072 ATP5F1P3-201ENST00000397213 657 ntBASIC5.04□□□□□ -1.6
VCPP55072 AL445189.1-201ENST00000405722 338 ntBASIC5.04□□□□□ -1.6
VCPP55072 SNORA11.1-201ENST00000408133 129 ntBASIC5.04□□□□□ -1.6
VCPP55072 RPL21P108-201ENST00000413857 481 ntBASIC5.04□□□□□ -1.6
VCPP55072 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC5.04□□□□□ -1.6
VCPP55072 AL358176.3-201ENST00000420757 454 ntBASIC5.04□□□□□ -1.6
VCPP55072 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC5.04□□□□□ -1.6
VCPP55072 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC5.04□□□□□ -1.6
VCPP55072 AL035551.1-201ENST00000446931 348 ntBASIC5.04□□□□□ -1.6
VCPP55072 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC5.04□□□□□ -1.6
VCPP55072 AL445433.1-201ENST00000457507 257 ntBASIC5.04□□□□□ -1.6
VCPP55072 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms